#MotifLabMotif   (inspired by INCLUSive Motif Model v1.0)

#Collection = Footprint-3D


#ID = F3D10001
#Short = 2ff0_A
#Long = Steroidogenic factor 1
#W = 9
#Organisms = Mus musculus
#Description = Solution Structure of Steroidogenic Factor 1 DNA Binding Domain Bound to its Target Sequence in the Inhibin alpha-subunit Promoter
0.0	0.0	0.0	96.0
0.0	0.0	84.0	12.0
12.0	12.0	60.0	12.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
12.0	12.0	12.0	60.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D10004
#Short = 2gat_A
#Long = ERYTHROID TRANSCRIPTION FACTOR GATA-1
#W = 5
#Organisms = Gallus gallus
#Description = SOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF CHICKEN GATA-1 BOUND TO DNA, NMR, REGULARIZED MEAN STRUCTURE
18.0	18.0	18.0	42.0
60.0	12.0	12.0	12.0
13.0	13.0	13.0	57.0
4.0	84.0	4.0	4.0
6.0	6.0	6.0	78.0

#ID = F3D10015
#Short = 2hdc_A
#Long = PROTEIN (TRANSCRIPTION FACTOR)
#W = 10
#Organisms = Rattus norvegicus
#Description = STRUCTURE OF TRANSCRIPTION FACTOR GENESIS/DNA COMPLEX
8.0	8.0	8.0	72.0
2.0	4.0	88.0	2.0
0.0	0.0	0.0	96.0
2.0	1.0	1.0	92.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
20.0	20.0	20.0	36.0
10.0	10.0	13.0	63.0
10.0	13.0	10.0	63.0
38.0	20.0	19.0	19.0

#ID = F3D10021
#Short = 2hzv_A
#Long = Nickel-responsive regulator
#W = 5
#Organisms = Escherichia coli (strain K12)
#Description = NikR-operator DNA complex
0.0	0.0	0.0	96.0
12.0	84.0	0.0	0.0
96.0	0.0	0.0	0.0
12.0	12.0	12.0	60.0
60.0	12.0	12.0	12.0

#ID = F3D10025
#Short = 2i9t_A
#Long = Transcription factor p65
#W = 4
#Organisms = Mus musculus
#Description = Structure of NF-kB p65-p50 heterodimer bound to PRDII element of B-interferon promoter
2.0	1.0	92.0	1.0
0.0	0.0	95.0	1.0
60.0	12.0	11.0	13.0
39.0	19.0	19.0	19.0

#ID = F3D10032
#Short = 2kae_A
#Long = GATA-type transcription factor
#W = 10
#Organisms = Caenorhabditis elegans
#Description = data-driven model of MED1:DNA complex
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
85.0	3.0	5.0	3.0
10.0	13.0	63.0	10.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
88.0	4.0	2.0	2.0
2.0	90.0	2.0	2.0
2.0	2.0	2.0	90.0

#ID = F3D10045
#Short = 2mf8_A
#Long = Myelin transcription factor 1
#W = 7
#Organisms = Mus musculus
#Description = HADDOCK model of MyT1 F4F5 - DNA complex
20.0	19.0	38.0	19.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
13.0	56.0	13.0	14.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
13.0	14.0	13.0	56.0

#ID = F3D10063
#Short = 2pi0_B
#Long = Interferon regulatory factor 3
#W = 4
#Organisms = Homo sapiens
#Description = Crystal Structure of IRF-3 bound to the PRDIII-I regulatory element of the human interferon-B enhancer
12.0	12.0	12.0	60.0
0.0	0.0	0.0	96.0
12.0	12.0	12.0	60.0
0.0	84.0	0.0	12.0

#ID = F3D10075
#Short = 2uzk_A
#Long = FORKHEAD BOX PROTEIN O3A
#W = 6
#Organisms = Homo sapiens
#Description = Crystal structure of the human FOXO3a-DBD bound to DNA
13.0	13.0	14.0	56.0
7.0	7.0	74.0	8.0
19.0	19.0	19.0	39.0
0.0	0.0	0.0	96.0
6.0	6.0	6.0	78.0
88.0	2.0	2.0	4.0

#ID = F3D10091
#Short = 2zhg_A
#Long = Redox-sensitive transcriptional activator soxR
#W = 4
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of SoxR in complex with DNA
52.0	14.0	14.0	16.0
0.0	96.0	0.0	0.0
19.0	19.0	20.0	38.0
19.0	20.0	19.0	38.0

#ID = F3D10138
#Short = 3g6r_AB
#Long = Glucocorticoid receptor
#W = 13
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:FKBP5 complex-52, 18bp
8.0	8.0	72.0	8.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
72.0	8.0	8.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	8.0	8.0	72.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	80.0	8.0	8.0

#ID = F3D10146
#Short = 3g8x_B
#Long = Glucocorticoid receptor
#W = 5
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:GilZ 16bp complex-65
9.0	9.0	69.0	9.0
7.0	7.0	75.0	7.0
19.0	19.0	20.0	38.0
21.0	21.0	21.0	33.0
13.0	56.0	13.0	14.0

#ID = F3D10208
#Short = 3lnq_A
#Long = Homeobox protein aristaless
#W = 7
#Organisms = Drosophila melanogaster
#Description = Structure of Aristaless homeodomain in complex with DNA
6.0	6.0	6.0	78.0
6.0	6.0	6.0	78.0
78.0	6.0	6.0	6.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
72.0	6.0	12.0	6.0
78.0	6.0	6.0	6.0

#ID = F3D10219
#Short = 3n97_A
#Long = RNA polymerase sigma factor
#W = 5
#Organisms = Thermus aquaticus
#Description = RNA polymerase alpha C-terminal domain (E. coli) and sigma region 4 (T. aq. mutant) bound to (UP,-35 element) DNA
4.0	81.0	4.0	7.0
3.0	3.0	3.0	87.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D10231
#Short = 3q5f_A
#Long = Transcriptional regulator slyA
#W = 10
#Organisms = Salmonella enterica,Salmonella enterica subsp. enterica serovar Typhimurium,strain LT2 / SGSC1412 / ATCC 700720
#Description = Crystal structure of the Salmonella transcriptional regulator SlyA in complex with DNA
78.0	6.0	6.0	6.0
6.0	6.0	6.0	78.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
6.0	6.0	78.0	6.0
0.0	96.0	0.0	0.0
6.0	6.0	6.0	78.0

#ID = F3D10274
#Short = 3zkc_A
#Long = HTH-TYPE TRANSCRIPTIONAL REGULATOR SINR
#W = 5
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of the master regulator for biofilm formation SinR in complex with DNA.
6.0	6.0	78.0	6.0
7.0	7.0	8.0	74.0
7.0	7.0	8.0	74.0
10.0	63.0	10.0	13.0
18.0	18.0	18.0	42.0

#ID = F3D10291
#Short = 4ati_B
#Long = MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR
#W = 6
#Organisms = Mus musculus
#Description = MITF:M-box complex
10.0	10.0	10.0	66.0
19.0	20.0	38.0	19.0
8.0	8.0	10.0	70.0
0.0	0.0	96.0	0.0
12.0	60.0	12.0	12.0
10.0	10.0	13.0	63.0

#ID = F3D10298
#Short = 4bnc_A
#Long = HUMAN ETV1
#W = 6
#Organisms = Homo sapiens
#Description = Crystal structure of the DNA-binding domain of human ETV1 complexed with DNA
19.0	45.0	16.0	16.0
9.0	9.0	9.0	69.0
5.0	3.0	3.0	85.0
6.0	78.0	6.0	6.0
0.0	96.0	0.0	0.0
6.0	6.0	78.0	6.0

#ID = F3D10299
#Short = 4bqa_A
#Long = PROTEIN C-ETS-2
#W = 5
#Organisms = Homo sapiens
#Description = Crystal structure of the ETS domain of human ETS2 in complex with DNA
12.0	12.0	12.0	60.0
12.0	0.0	0.0	84.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
12.0	12.0	60.0	12.0

#ID = F3D10319
#Short = 4f6m_A
#Long = Transcriptional regulator Kaiso
#W = 8
#Organisms = Homo sapiens
#Description = Crystal structure of Kaiso zinc finger DNA binding domain in complex with Kaiso binding site DNA
12.0	12.0	12.0	60.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	12.0	0.0	84.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
12.0	72.0	12.0	0.0
84.0	0.0	12.0	0.0

#ID = F3D10336
#Short = 4i2o_B
#Long = FixK2 protein
#W = 4
#Organisms = Bradyrhizobium japonicum
#Description = The Structure of FixK2 from Bradyrhizobium japonicum
4.0	2.0	2.0	88.0
1.0	92.0	1.0	2.0
96.0	0.0	0.0	0.0
45.0	16.0	19.0	16.0

#ID = F3D10348
#Short = 4iri_A
#Long = Transcriptional regulator ERG
#W = 6
#Organisms = Homo sapiens
#Description = Auto-inhibited ERG Ets Domain-DNA Complex
12.0	60.0	12.0	12.0
12.0	12.0	12.0	60.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	12.0	84.0	0.0

#ID = F3D10384
#Short = 4lup_A
#Long = RNA polymerase sigma factor
#W = 7
#Organisms = Escherichia coli
#Description = Crystal structure of the complex formed by region of E. coli sigmaE bound to its -10 element non template strand
14.0	14.0	14.0	54.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
60.0	12.0	12.0	12.0
96.0	0.0	0.0	0.0

#ID = F3D10386
#Short = 4m9v_C
#Long = Zinc finger protein 57
#W = 6
#Organisms = Mus musculus
#Description = Zfp57 mutant (E182Q) in complex with 5-carboxylcytosine DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
3.0	85.0	5.0	3.0
2.0	4.0	88.0	2.0
9.0	67.0	9.0	11.0
96.0	0.0	0.0	0.0

#ID = F3D10406
#Short = 4ond_A
#Long = Ancestral SR2 Helix Mutant
#W = 4
#Organisms = synthetic construct
#Description = Ancestral Steroid Receptor 2 DBD helix mutant - ERE DNA complex
12.0	12.0	60.0	12.0
12.0	12.0	12.0	60.0
0.0	96.0	0.0	0.0
84.0	0.0	0.0	12.0

#ID = F3D10420
#Short = 4r2q_A
#Long = Wilms tumor protein, isoform 4/CRA_a
#W = 9
#Organisms = Homo sapiens
#Description = Wilms Tumor Protein (WT1) zinc fingers in complex with formylated DNA
45.0	16.0	16.0	19.0
10.0	10.0	66.0	10.0
0.0	96.0	0.0	0.0
2.0	90.0	2.0	2.0
3.0	85.0	3.0	5.0
96.0	0.0	0.0	0.0
8.0	72.0	8.0	8.0
0.0	0.0	96.0	0.0
9.0	67.0	9.0	11.0

#ID = F3D10446
#Short = 4x4g_C
#Long = Regulatory protein
#W = 4
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 35.7 MGy
0.0	96.0	0.0	0.0
54.0	16.0	13.0	13.0
0.0	96.0	0.0	0.0
57.0	13.0	13.0	13.0

#ID = F3D10450
#Short = 4x4c_C
#Long = Regulatory protein
#W = 4
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 6.2 MGy
0.0	96.0	0.0	0.0
57.0	13.0	13.0	13.0
0.0	96.0	0.0	0.0
57.0	13.0	13.0	13.0

#ID = F3D12447
#Short = 1a02_N
#Long = NUCLEAR FACTOR OF ACTIVATED T CELLS
#W = 4
#Organisms = Homo sapiens
#Description = STRUCTURE OF THE DNA BINDING DOMAINS OF NFAT, FOS AND JUN BOUND TO DNA
3.0	3.0	86.0	4.0
0.0	0.0	96.0	0.0
94.0	0.0	1.0	1.0
41.0	12.0	28.0	15.0

#ID = F3D12502
#Short = 1d3u_A
#Long = TATA-BINDING PROTEIN
#W = 8
#Organisms = Pyrococcus woesei
#Description = TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/BRE+TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI
8.0	8.0	8.0	72.0
96.0	0.0	0.0	0.0
8.0	8.0	8.0	72.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
80.0	8.0	8.0	0.0
96.0	0.0	0.0	0.0
72.0	8.0	8.0	8.0

#ID = F3D12507
#Short = 1dp7_P
#Long = MHC CLASS II TRANSCRIPTION FACTOR HRFX1
#W = 9
#Organisms = Homo sapiens
#Description = COCRYSTAL STRUCTURE OF RFX-DBD IN COMPLEX WITH ITS COGNATE X-BOX BINDING SITE
38.0	19.0	19.0	20.0
9.0	67.0	11.0	9.0
21.0	33.0	21.0	21.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
52.0	14.0	14.0	16.0

#ID = F3D12510
#Short = 1ga5_F
#Long = ORPHAN NUCLEAR RECEPTOR NR1D1
#W = 5
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA-BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT
13.0	13.0	13.0	57.0
0.0	0.0	96.0	0.0
54.0	16.0	13.0	13.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D12520
#Short = 1f2i_GH
#Long = FUSION OF N-TERMINAL 17-MER PEPTIDE EXTENSION TO Z
#W = 12
#Organisms = Mus musculus
#Description = COCRYSTAL STRUCTURE OF SELECTED ZINC FINGER DIMER BOUND TO DNA
13.0	16.0	13.0	54.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
57.0	13.0	13.0	13.0

#ID = F3D12533
#Short = 1dsz_A
#Long = RETINOIC ACID RECEPTOR ALPHA
#W = 5
#Organisms = Homo sapiens
#Description = STRUCTURE OF THE RXR/RAR DNA-BINDING DOMAIN HETERODIMER IN COMPLEX WITH THE RETINOIC ACID RESPONSE ELEMENT DR1
13.0	13.0	13.0	57.0
0.0	0.0	96.0	0.0
57.0	13.0	13.0	13.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D12544
#Short = 1gtw_AB
#Long = CAAT/ENHANCER BINDING PROTEIN BETA
#W = 9
#Organisms = Homo sapiens
#Description = crystal structure of C/EBPbeta bZip homodimer bound to a DNA fragment from the tom-1A promoter
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
24.0	12.0	48.0	12.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
12.0	48.0	24.0	12.0

#ID = F3D12547
#Short = 1gu5_B
#Long = CAAT/ENHANCER BINDING PROTEIN BETA
#W = 4
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF C/EBPBETA BZIP DIMERIC BOUND TO A DNA FRAGMENT FROM THE MIM-1 PROMOTER
13.0	57.0	13.0	13.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
13.0	57.0	13.0	13.0

#ID = F3D12551
#Short = 1h0m_CD
#Long = TRANSCRIPTIONAL ACTIVATOR PROTEIN TRAR
#W = 12
#Organisms = Agrobacterium tumefaciens,Rhizobium radiobacter (Agrobacterium tumefaciens)
#Description = THREE-DIMENSIONAL STRUCTURE OF THE QUORUM SENSING PROTEIN TRAR BOUND TO ITS AUTOINDUCER AND TO ITS TARGET DNA
0.0	0.0	0.0	96.0
1.0	3.0	90.0	2.0
21.0	34.0	21.0	20.0
25.0	23.0	24.0	24.0
24.0	24.0	25.0	23.0
25.0	25.0	25.0	21.0
22.0	26.0	24.0	24.0
24.0	24.0	24.0	24.0
22.0	22.0	22.0	30.0
20.0	20.0	38.0	18.0
4.0	85.0	3.0	4.0
67.0	10.0	9.0	10.0

#ID = F3D12595
#Short = 1je8_F
#Long = Nitrate/Nitrite Response Regulator Protein NARL
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Two-Component response regulator NarL/DNA Complex: DNA Bending Found in a High Affinity Site
0.0	0.0	0.0	96.0
24.0	12.0	48.0	12.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
12.0	24.0	12.0	48.0
96.0	0.0	0.0	0.0

#ID = F3D12650
#Short = 1mhd_B
#Long = SMAD3
#W = 6
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF A SMAD MH1 DOMAIN BOUND TO DNA
8.0	8.0	8.0	72.0
96.0	0.0	0.0	0.0
11.0	8.0	69.0	8.0
69.0	11.0	8.0	8.0
0.0	96.0	0.0	0.0
1.0	0.0	8.0	87.0

#ID = F3D12683
#Short = 1ozj_A
#Long = SMAD 3
#W = 5
#Organisms = Homo sapiens
#Description = Crystal structure of Smad3-MH1 bound to DNA at 2.4 A resolution
0.0	0.0	19.0	77.0
0.0	0.0	96.0	0.0
19.0	20.0	19.0	38.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D12686
#Short = 1p47_B
#Long = Early growth response protein 1
#W = 11
#Organisms = Mus musculus
#Description = Crystal Structure of tandem Zif268 molecules complexed to DNA
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
80.0	16.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	16.0	80.0	0.0
0.0	96.0	0.0	0.0
16.0	48.0	16.0	16.0

#ID = F3D12759
#Short = 1vtl_E
#Long = TATA BINDING PROTEIN (TBP)
#W = 8
#Organisms = Arabidopsis thaliana
#Description = CO-CRYSTAL STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF A TATA ELEMENT
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
72.0	12.0	12.0	0.0
60.0	12.0	12.0	12.0
96.0	0.0	0.0	0.0
12.0	12.0	72.0	0.0

#ID = F3D12769
#Short = 1ysa_CD
#Long = PROTEIN (GCN4)
#W = 9
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = THE GCN4 BASIC REGION LEUCINE ZIPPER BINDS DNA AS A DIMER OF UNINTERRUPTED ALPHA HELICES: CRYSTAL STRUCTURE OF THE PROTEIN-DNA COMPLEX
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
48.0	12.0	12.0	24.0
48.0	12.0	24.0	12.0

#ID = F3D12820
#Short = 2erg_AB
#Long = Regulatory protein LEU3
#W = 10
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Crystal Structure of Leu3 DNA-binding domain with a single H50C mutation complexed with a 15mer DNA duplex
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
16.0	13.0	54.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
16.0	54.0	13.0	13.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D12857
#Short = 2lef_A
#Long = PROTEIN (LYMPHOID ENHANCER-BINDING FACTOR)
#W = 8
#Organisms = Mus musculus
#Description = LEF1 HMG DOMAIN (FROM MOUSE), COMPLEXED WITH DNA (15BP), NMR, 12 STRUCTURES
0.0	96.0	0.0	0.0
12.0	12.0	12.0	60.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
60.0	12.0	12.0	12.0
96.0	0.0	0.0	0.0
0.0	0.0	84.0	12.0

#ID = F3D12874
#Short = 2p7c_B
#Long = Penicillinase repressor
#W = 7
#Organisms = Bacillus licheniformis
#Description = Solution structure of the bacillus licheniformis BlaI monomeric form in complex with the blaP half-operator.
57.0	13.0	13.0	13.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
16.0	13.0	13.0	54.0

#ID = F3D12879
#Short = 2pue_A
#Long = PROTEIN (PURINE REPRESSOR )
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
54.0	16.0	13.0	13.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
13.0	13.0	54.0	16.0

#ID = F3D12880
#Short = 2pud_A
#Long = PROTEIN (PURINE REPRESSOR)
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
12.0	60.0	12.0	12.0
31.0	21.0	21.0	23.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
16.0	16.0	48.0	16.0

#ID = F3D12888
#Short = 2v2t_AB
#Long = TRANSCRIPTION FACTOR RELB
#W = 10
#Organisms = Mus musculus
#Description = X-RAY STRUCTURE OF A NF-KB P50-RELB-DNA COMPLEX
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
16.0	16.0	56.0	8.0
72.0	8.0	8.0	8.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
16.0	56.0	8.0	16.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D12916
#Short = 3coq_AB
#Long = Regulatory protein GAL4
#W = 17
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Structural Basis for Dimerization in DNA Recognition by Gal4
16.0	54.0	13.0	13.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
16.0	13.0	54.0	13.0

#ID = F3D12953
#Short = 3g8u_AB
#Long = Glucocorticoid receptor
#W = 13
#Organisms = Rattus norvegicus
#Description = DNA binding domain:GilZ 16bp complex-5
0.0	0.0	96.0	0.0
48.0	16.0	16.0	16.0
56.0	16.0	8.0	16.0
0.0	96.0	0.0	0.0
72.0	8.0	8.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0

#ID = F3D12968
#Short = 3iag_C
#Long = Recombining binding protein suppressor of hairless
#W = 7
#Organisms = Mus musculus
#Description = CSL (RBP-Jk) bound to HES-1 nonconsensus site
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
60.0	12.0	12.0	12.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
12.0	48.0	12.0	24.0
0.0	0.0	96.0	0.0

#ID = F3D12975
#Short = 3iv5_B
#Long = DNA-binding protein fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp optimal binding sequence F1
0.0	96.0	0.0	0.0
38.0	19.0	19.0	20.0
24.0	24.0	24.0	24.0
76.0	20.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D13011
#Short = 3laj_BF
#Long = Arginine repressor
#W = 13
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-arginine.
0.0	0.0	90.0	6.0
0.0	96.0	0.0	0.0
84.0	6.0	0.0	6.0
0.0	0.0	0.0	96.0
6.0	72.0	6.0	12.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
96.0	0.0	0.0	0.0
0.0	6.0	6.0	84.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
72.0	6.0	12.0	6.0

#ID = F3D13019
#Short = 3mfk_B
#Long = Protein C-ets-1
#W = 5
#Organisms = Homo sapiens
#Description = Ets1 complex with stromelysin-1 promoter DNA
54.0	16.0	13.0	13.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
54.0	13.0	13.0	16.0

#ID = F3D13072
#Short = 3wtw_F
#Long = Runt-related transcription factor 1
#W = 8
#Organisms = Mus musculus
#Description = Crystal structure of the complex comprised of ETS1(Y329A), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
6.0	3.0	3.0	84.0
0.0	0.0	96.0	0.0
3.0	3.0	3.0	87.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
15.0	51.0	12.0	18.0
15.0	3.0	18.0	60.0
21.0	3.0	3.0	69.0

#ID = F3D13096
#Short = 4auw_EF
#Long = TRANSCRIPTION FACTOR MAFB
#W = 14
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF THE BZIP HOMODIMERIC MAFB IN COMPLEX WITH THE C- MARE BINDING SITE
4.0	4.0	4.0	84.0
0.0	0.0	96.0	0.0
4.0	84.0	4.0	4.0
24.0	24.0	24.0	24.0
84.0	4.0	4.0	4.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
8.0	4.0	8.0	76.0
4.0	4.0	4.0	84.0
4.0	4.0	84.0	4.0
0.0	96.0	0.0	0.0
84.0	4.0	4.0	4.0

#ID = F3D13135
#Short = 4iht_D
#Long = HTH-type transcriptional regulator BenM
#W = 9
#Organisms = Acinetobacter baylyi,Acinetobacter sp. ADP1,strain ATCC 33305 / BD413 / ADP1
#Description = Crystal Structure of BenM_DBD/benA site 1 DNA Complex
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
67.0	9.0	9.0	11.0
0.0	0.0	0.0	96.0
9.0	9.0	9.0	69.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	9.0	11.0	67.0

#ID = F3D13160
#Short = 4kdp_B
#Long = TcaR transcription regulator
#W = 5
#Organisms = Staphylococcus epidermidis,strain ATCC 12228
#Description = TcaR-ssDNA complex crystal structure reveals the novel ssDNA binding mechanism of the MarR family proteins
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
13.0	54.0	16.0	13.0
96.0	0.0	0.0	0.0
13.0	16.0	54.0	13.0

#ID = F3D13228
#Short = 4s0h_F
#Long = Homeobox protein Nkx-2.5
#W = 5
#Organisms = Homo sapiens
#Description = TBX5 DB, NKX2.5 HD, ANF DNA Complex
12.0	60.0	12.0	12.0
34.0	20.0	22.0	20.0
6.0	78.0	6.0	6.0
3.0	5.0	3.0	85.0
15.0	15.0	15.0	51.0

#ID = F3D13241
#Short = 4wls_B
#Long = HTH-type transcriptional regulator CueR
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of the metal-free (repressor) form of E. Coli CUER, a copper efflux regulator, bound to COPA promoter DNA
6.0	84.0	0.0	6.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
6.0	6.0	78.0	6.0
72.0	6.0	6.0	12.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	78.0	6.0

#ID = F3D13258
#Short = 4x4d_C
#Long = Regulatory protein
#W = 4
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 10.3 MGy
0.0	96.0	0.0	0.0
54.0	13.0	16.0	13.0
0.0	96.0	0.0	0.0
54.0	16.0	13.0	13.0

#ID = F3D13262
#Short = 4x4f_C
#Long = Regulatory protein
#W = 4
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 20.6 MGy
0.0	96.0	0.0	0.0
54.0	13.0	13.0	16.0
0.0	96.0	0.0	0.0
57.0	13.0	13.0	13.0

#ID = F3D13265
#Short = 4xid_A
#Long = Homeotic protein antennapedia
#W = 7
#Organisms = Drosophila melanogaster
#Description = AntpHD with 15bp DNA duplex
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
12.0	12.0	12.0	60.0
12.0	12.0	60.0	12.0
0.0	12.0	84.0	0.0

#ID = F3D13266
#Short = 4xlp_F
#Long = RNA polymerase sigma factor SigA
#W = 25
#Organisms = Thermus aquaticus
#Description = Crystal structure of T.aquaticus transcription initiation complex containing upstream fork promoter
8.0	72.0	8.0	8.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
16.0	56.0	8.0	16.0
48.0	16.0	16.0	16.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D13269
#Short = 4xrs_BI
#Long = Homeobox protein Meis1
#W = 9
#Organisms = Homo sapiens
#Description = Heterodimeric complex of transcription factors MEIS1 and DLX3 on specific DNA
0.0	0.0	0.0	96.0
63.0	10.0	10.0	13.0
12.0	12.0	12.0	60.0
21.0	31.0	23.0	21.0
24.0	24.0	24.0	24.0
22.0	25.0	22.0	27.0
24.0	24.0	24.0	24.0
19.0	19.0	19.0	39.0
13.0	57.0	13.0	13.0

#ID = F3D13280
#Short = 4yo2_A
#Long = Transcription factor E2F8
#W = 8
#Organisms = Homo sapiens
#Description = Structure of E2F8, an atypical member of E2F family of transcription factors
0.0	12.0	12.0	72.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
24.0	0.0	72.0	0.0
48.0	24.0	12.0	12.0

#ID = F3D13281
#Short = 4zkg_A
#Long = Mothers against decapentaplegic homolog 5
#W = 6
#Organisms = Mus musculus
#Description = Crystal Structure of SMAD5-MH1/palindromic SBE DNA complex
14.0	14.0	14.0	54.0
6.0	6.0	77.0	7.0
20.0	20.0	22.0	34.0
4.0	81.0	4.0	7.0
2.0	3.0	2.0	89.0
62.0	9.0	14.0	11.0

#ID = F3D13285
#Short = 4zl3_EF
#Long = Mothers against decapentaplegic homolog 5
#W = 12
#Organisms = Mus musculus
#Description = Crystal Structure of SMAD5-MH1 in complex with a composite DNA sequence
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
48.0	30.0	6.0	12.0
0.0	96.0	0.0	0.0
12.0	6.0	66.0	12.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
60.0	18.0	12.0	6.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	0.0	90.0	6.0

#ID = F3D13293
#Short = 5bng_A
#Long = Homeobox protein Meis2
#W = 5
#Organisms = Homo sapiens
#Description = monomer of TALE type homeobox transcription factor MEIS1 complexes with specific DNA
7.0	7.0	7.0	75.0
14.0	14.0	54.0	14.0
90.0	2.0	2.0	2.0
7.0	74.0	8.0	7.0
66.0	10.0	10.0	10.0

#ID = F3D13296
#Short = 5c8e_EG
#Long = Light-dependent transcriptional regulator CarH
#W = 9
#Organisms = strain HB27 / ATCC BAA-163 / DSM 7039,Thermus thermophilus
#Description = Crystal structure of Thermus thermophilus CarH bound to adenosylcobalamin and a 26-bp DNA segment
38.0	19.0	19.0	20.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
25.0	22.0	22.0	27.0
24.0	24.0	24.0	24.0
9.0	11.0	9.0	67.0
12.0	12.0	60.0	12.0
10.0	10.0	13.0	63.0

#ID = F3D14243
#Short = 1a02_FJN
#Long = AP-1 FRAGMENT FOS
#W = 15
#Organisms = Homo sapiens
#Description = STRUCTURE OF THE DNA BINDING DOMAINS OF NFAT, FOS AND JUN BOUND TO DNA
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
76.0	7.0	9.0	4.0
24.0	24.0	24.0	24.0
59.0	14.0	14.0	9.0
24.0	24.0	24.0	24.0
14.0	14.0	9.0	59.0
1.0	4.0	0.0	91.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
4.0	9.0	4.0	79.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14244
#Short = 1a0a_AB
#Long = PROTEIN (PHOSPHATE SYSTEM POSITIVE REGULATORY PROT
#W = 7
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO4/DNA COMPLEX
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
38.0	19.0	20.0	19.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	19.0	77.0
0.0	0.0	96.0	0.0

#ID = F3D14245
#Short = 1a0a_B
#Long = PROTEIN (PHOSPHATE SYSTEM POSITIVE REGULATORY PROT
#W = 5
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO4/DNA COMPLEX
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
13.0	57.0	13.0	13.0
13.0	13.0	54.0	16.0

#ID = F3D14246
#Short = 1a1g_A
#Long = DSNR ZINC FINGER PEPTIDE
#W = 8
#Organisms = Mus musculus
#Description = DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)
3.0	6.0	82.0	5.0
0.0	95.0	1.0	0.0
0.0	95.0	1.0	0.0
2.0	91.0	3.0	0.0
55.0	7.0	8.0	26.0
3.0	86.0	3.0	4.0
15.0	5.0	74.0	2.0
5.0	83.0	4.0	4.0

#ID = F3D14247
#Short = 1a1h_A
#Long = QGSR ZINC FINGER PEPTIDE
#W = 9
#Organisms = Mus musculus
#Description = QGSR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)
0.0	0.0	0.0	96.0
0.0	19.0	76.0	1.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
39.0	19.0	19.0	19.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14248
#Short = 1a1i_A
#Long = RADR ZIF268 ZINC FINGER PEPTIDE
#W = 8
#Organisms = Mus musculus
#Description = RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)
19.0	19.0	39.0	19.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
19.0	0.0	77.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14249
#Short = 1a1j_A
#Long = PROTEIN (RADR ZIF268 ZINC FINGER PEPTIDE)
#W = 8
#Organisms = Mus musculus
#Description = RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)
16.0	13.0	54.0	13.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
54.0	13.0	16.0	13.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14250
#Short = 1a1l_A
#Long = PROTEIN (ZIF268 ZINC FINGER PEPTIDE)
#W = 8
#Organisms = Mus musculus
#Description = ZIF268 ZINC FINGER-DNA COMPLEX (GCAC SITE)
16.0	0.0	80.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
48.0	16.0	16.0	16.0
0.0	96.0	0.0	0.0
0.0	16.0	80.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14251
#Short = 1a3q_A
#Long = PROTEIN (NUCLEAR FACTOR KAPPA-B P52)
#W = 6
#Organisms = Homo sapiens
#Description = HUMAN NF-KAPPA-B P52 BOUND TO DNA
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
54.0	16.0	13.0	13.0
54.0	13.0	13.0	16.0

#ID = F3D14252
#Short = 1a3q_AB
#Long = PROTEIN (NUCLEAR FACTOR KAPPA-B P52)
#W = 11
#Organisms = Homo sapiens
#Description = HUMAN NF-KAPPA-B P52 BOUND TO DNA
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
73.0	7.0	7.0	9.0
73.0	7.0	9.0	7.0
7.0	9.0	7.0	73.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	73.0	7.0	9.0

#ID = F3D14253
#Short = 1a66_A
#Long = CORE NFATC1
#W = 8
#Organisms = Homo sapiens
#Description = SOLUTION NMR STRUCTURE OF THE CORE NFATC1/DNA COMPLEX, 18 STRUCTURES
13.0	13.0	13.0	57.0
24.0	24.0	24.0	24.0
13.0	13.0	13.0	57.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0

#ID = F3D14254
#Short = 1a6y_AB
#Long = ORPHAN NUCLEAR RECEPTOR NR1D1
#W = 14
#Organisms = Homo sapiens
#Description = REVERBA ORPHAN NUCLEAR RECEPTOR/DNA COMPLEX
13.0	5.0	5.0	73.0
0.0	0.0	96.0	0.0
62.0	12.0	11.0	11.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	11.0	5.0	67.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
5.0	19.0	5.0	67.0

#ID = F3D14255
#Short = 1aay_A
#Long = PROTEIN (ZIF268 ZINC FINGER PEPTIDE)
#W = 10
#Organisms = Mus musculus
#Description = ZIF268 ZINC FINGER-DNA COMPLEX
57.0	13.0	13.0	13.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
54.0	16.0	13.0	13.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14256
#Short = 1ahd_P
#Long = Homeotic protein antennapedia
#W = 11
#Organisms = Drosophila melanogaster,Drosophila subobscura
#Description = DETERMINATION OF THE NMR SOLUTION STRUCTURE OF AN ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
88.0	3.0	2.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
84.0	3.0	3.0	6.0
3.0	3.0	3.0	87.0
15.0	7.0	13.0	61.0
61.0	13.0	15.0	7.0
0.0	0.0	96.0	0.0
84.0	3.0	6.0	3.0

#ID = F3D14257
#Short = 1ais_A
#Long = PROTEIN (TATA-BINDING PROTEIN)
#W = 8
#Organisms = Pyrococcus woesei
#Description = TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI
0.0	12.0	12.0	72.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	12.0	0.0	84.0
84.0	0.0	12.0	0.0
96.0	0.0	0.0	0.0
60.0	12.0	12.0	12.0

#ID = F3D14258
#Short = 1akh_AB
#Long = PROTEIN (MATING-TYPE PROTEIN A-1)
#W = 17
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = MAT A1/ALPHA2/DNA TERNARY COMPLEX
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
84.0	0.0	12.0	0.0
24.0	24.0	24.0	24.0
84.0	0.0	6.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
12.0	6.0	12.0	66.0
0.0	0.0	0.0	96.0
6.0	18.0	12.0	60.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14259
#Short = 1akh_B
#Long = PROTEIN (MATING-TYPE PROTEIN ALPHA-2)
#W = 7
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = MAT A1/ALPHA2/DNA TERNARY COMPLEX
10.0	12.0	21.0	53.0
0.0	10.0	0.0	86.0
10.0	21.0	12.0	53.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14260
#Short = 1am9_A
#Long = PROTEIN (STEROL REGULATORY ELEMENT BINDING PROTEIN
#W = 5
#Organisms = Homo sapiens
#Description = HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
64.0	16.0	16.0	0.0
0.0	96.0	0.0	0.0
16.0	48.0	16.0	16.0

#ID = F3D14261
#Short = 1am9_AB
#Long = PROTEIN (STEROL REGULATORY ELEMENT BINDING PROTEIN
#W = 9
#Organisms = Homo sapiens
#Description = HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
67.0	9.0	11.0	9.0
0.0	96.0	0.0	0.0
9.0	67.0	11.0	9.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
67.0	9.0	9.0	11.0
0.0	96.0	0.0	0.0

#ID = F3D14262
#Short = 1am9_CD
#Long = PROTEIN (STEROL REGULATORY ELEMENT BINDING PROTEIN
#W = 9
#Organisms = Homo sapiens
#Description = HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
13.0	57.0	13.0	13.0
13.0	57.0	13.0	13.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14263
#Short = 1apl_CD
#Long = PROTEIN (MAT-ALPHA2 HOMEODOMAIN)
#W = 16
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = CRYSTAL STRUCTURE OF A MAT-ALPHA2 HOMEODOMAIN-OPERATOR COMPLEX SUGGESTS A GENERAL MODEL FOR HOMEODOMAIN-DNA INTERACTIONS
9.0	4.0	3.0	80.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
65.0	9.0	10.0	12.0
24.0	24.0	24.0	24.0
3.0	3.0	4.0	86.0
3.0	3.0	1.0	89.0
24.0	24.0	24.0	24.0
86.0	0.0	6.0	4.0
15.0	3.0	6.0	72.0
24.0	24.0	24.0	24.0
3.0	4.0	3.0	86.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
90.0	0.0	3.0	3.0

#ID = F3D14264
#Short = 1apl_D
#Long = PROTEIN (MAT-ALPHA2 HOMEODOMAIN)
#W = 7
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = CRYSTAL STRUCTURE OF A MAT-ALPHA2 HOMEODOMAIN-OPERATOR COMPLEX SUGGESTS A GENERAL MODEL FOR HOMEODOMAIN-DNA INTERACTIONS
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
54.0	13.0	13.0	16.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
13.0	16.0	13.0	54.0

#ID = F3D14265
#Short = 1au7_A
#Long = PROTEIN PIT-1
#W = 11
#Organisms = Rattus norvegicus
#Description = PIT-1 MUTANT/DNA COMPLEX
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
6.0	6.0	8.0	76.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
12.0	6.0	8.0	70.0
60.0	12.0	12.0	12.0
0.0	96.0	0.0	0.0
76.0	0.0	14.0	6.0
0.0	0.0	0.0	96.0

#ID = F3D14266
#Short = 1au7_AB
#Long = PROTEIN PIT-1
#W = 14
#Organisms = Rattus norvegicus
#Description = PIT-1 MUTANT/DNA COMPLEX
11.0	19.0	9.0	57.0
11.0	57.0	9.0	19.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
9.0	1.0	0.0	86.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
87.0	0.0	0.0	9.0
0.0	0.0	0.0	96.0

#ID = F3D14267
#Short = 1awc_A
#Long = PROTEIN (GA BINDING PROTEIN ALPHA)
#W = 6
#Organisms = Mus musculus
#Description = MOUSE GABP ALPHA/BETA DOMAIN BOUND TO DNA
13.0	54.0	16.0	13.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
13.0	13.0	54.0	16.0

#ID = F3D14268
#Short = 1b01_B
#Long = TRANSCRIPTIONAL REPRESSOR COPG
#W = 7
#Organisms = Streptococcus agalactiae
#Description = TRANSCRIPTIONAL REPRESSOR COPG/DNA COMPLEX
8.0	6.0	76.0	6.0
0.0	0.0	6.0	90.0
8.0	6.0	76.0	6.0
6.0	76.0	8.0	6.0
78.0	6.0	6.0	6.0
0.0	89.0	6.0	1.0
0.0	0.0	96.0	0.0

#ID = F3D14269
#Short = 1b3t_A
#Long = PROTEIN (NUCLEAR PROTEIN EBNA1)
#W = 7
#Organisms = Epstein-Barr virus (strain B95-8) (HHV-4),Human herpesvirus 4
#Description = EBNA-1 NUCLEAR PROTEIN/DNA COMPLEX
6.0	6.0	78.0	6.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
78.0	6.0	6.0	6.0
16.0	6.0	68.0	6.0
6.0	78.0	6.0	6.0

#ID = F3D14270
#Short = 1b3t_AB
#Long = PROTEIN (NUCLEAR PROTEIN EBNA1)
#W = 18
#Organisms = Epstein-Barr virus (strain B95-8) (HHV-4),Human herpesvirus 4
#Description = EBNA-1 NUCLEAR PROTEIN/DNA COMPLEX
4.0	1.0	90.0	1.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
92.0	2.0	1.0	1.0
5.0	5.0	76.0	10.0
1.0	92.0	0.0	3.0
71.0	9.0	9.0	7.0
1.0	11.0	4.0	80.0
88.0	1.0	6.0	1.0
5.0	7.0	1.0	83.0
9.0	4.0	80.0	3.0
1.0	80.0	12.0	3.0
0.0	1.0	1.0	94.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	88.0	5.0	3.0

#ID = F3D14271
#Short = 1b72_A
#Long = PROTEIN (HOMEOBOX PROTEIN HOX-B1)
#W = 6
#Organisms = Homo sapiens
#Description = PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX
12.0	19.0	0.0	65.0
6.0	1.0	89.0	0.0
96.0	0.0	0.0	0.0
76.0	6.0	2.0	12.0
24.0	24.0	24.0	24.0
19.0	25.0	40.0	12.0

#ID = F3D14272
#Short = 1b72_AB
#Long = PROTEIN (HOMEOBOX PROTEIN HOX-B1)
#W = 9
#Organisms = Homo sapiens
#Description = PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX
66.0	14.0	7.0	9.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	7.0	8.0	81.0
0.0	8.0	81.0	7.0
96.0	0.0	0.0	0.0
59.0	7.0	14.0	16.0

#ID = F3D14273
#Short = 1b8i_AB
#Long = PROTEIN (ULTRABITHORAX HOMEOTIC PROTEIN IV)
#W = 11
#Organisms = Drosophila melanogaster
#Description = STRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX
2.0	15.0	64.0	15.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
70.0	0.0	11.0	15.0
2.0	2.0	4.0	88.0
0.0	4.0	2.0	90.0
4.0	2.0	2.0	88.0
93.0	0.0	3.0	0.0
0.0	0.0	0.0	96.0
10.0	12.0	62.0	12.0
2.0	2.0	88.0	4.0

#ID = F3D14274
#Short = 1b8i_B
#Long = PROTEIN (HOMEOBOX PROTEIN EXTRADENTICLE)
#W = 5
#Organisms = Drosophila melanogaster
#Description = STRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX
13.0	13.0	57.0	13.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
13.0	13.0	13.0	57.0

#ID = F3D14275
#Short = 1bc7_C
#Long = PROTEIN (ETS-DOMAIN PROTEIN)
#W = 6
#Organisms = Homo sapiens
#Description = SERUM RESPONSE FACTOR ACCESSORY PROTEIN 1A (SAP-1)/DNA COMPLEX
66.0	10.0	10.0	10.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
10.0	10.0	2.0	74.0
10.0	12.0	64.0	10.0

#ID = F3D14276
#Short = 1bdh_A
#Long = PROTEIN (PURINE REPRESSOR)
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
13.0	54.0	16.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
13.0	13.0	57.0	13.0

#ID = F3D14277
#Short = 1bdi_A
#Long = PROTEIN (PURINE REPRESSOR)
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
57.0	13.0	13.0	13.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
13.0	13.0	54.0	16.0

#ID = F3D14278
#Short = 1bdt_ABCD
#Long = PROTEIN (GENE-REGULATING PROTEIN ARC)
#W = 19
#Organisms = Enterobacteria phage P22
#Description = WILD TYPE GENE-REGULATING PROTEIN ARC/DNA COMPLEX
0.0	0.0	0.0	96.0
0.0	1.0	9.0	86.0
54.0	18.0	11.0	13.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
54.0	9.0	13.0	20.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
4.0	88.0	0.0	4.0
4.0	64.0	6.0	22.0
96.0	0.0	0.0	0.0

#ID = F3D14279
#Short = 1bdv_ABCD
#Long = PROTEIN (ARC FV10 REPRESSOR)
#W = 15
#Organisms = Enterobacteria phage P22
#Description = ARC FV10 COCRYSTAL
8.0	6.0	6.0	76.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
76.0	6.0	6.0	8.0
70.0	0.0	12.0	14.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
12.0	64.0	14.0	6.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14280
#Short = 1bf5_A
#Long = SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 1
#W = 8
#Organisms = Homo sapiens
#Description = TYROSINE PHOSPHORYLATED STAT-1/DNA COMPLEX
0.0	0.0	96.0	0.0
13.0	54.0	16.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
16.0	13.0	13.0	54.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14281
#Short = 1bl0_A
#Long = PROTEIN (MULTIPLE ANTIBIOTIC RESISTANCE PROTEIN)
#W = 15
#Organisms = Escherichia coli (strain K12)
#Description = MULTIPLE ANTIBIOTIC RESISTANCE PROTEIN (MARA)/DNA COMPLEX
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
64.0	12.0	10.0	10.0
10.0	64.0	12.0	10.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
10.0	0.0	10.0	76.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14282
#Short = 1by4_B
#Long = PROTEIN (RETINOIC ACID RECEPTOR RXR-ALPHA)
#W = 5
#Organisms = Homo sapiens
#Description = STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNA
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
13.0	13.0	16.0	54.0
0.0	96.0	0.0	0.0
54.0	16.0	13.0	13.0

#ID = F3D14283
#Short = 1c0w_ABCD
#Long = DIPHTHERIA TOXIN REPRESSOR
#W = 13
#Organisms = Corynebacterium diphtheriae,strain ATCC 700971 / NCTC 13129 / Biotype gravis
#Description = CRYSTAL STRUCTURE OF THE COBALT-ACTIVATED DIPHTHERIA TOXIN REPRESSOR-DNA COMPLEX REVEALS A METAL BINDING SH-LIKE DOMAIN
79.0	5.0	5.0	7.0
5.0	5.0	81.0	5.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	91.0	5.0
5.0	81.0	5.0	5.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
5.0	81.0	5.0	5.0
5.0	7.0	5.0	79.0

#ID = F3D14284
#Short = 1c0w_B
#Long = DIPHTHERIA TOXIN REPRESSOR
#W = 5
#Organisms = Corynebacterium diphtheriae,strain ATCC 700971 / NCTC 13129 / Biotype gravis
#Description = CRYSTAL STRUCTURE OF THE COBALT-ACTIVATED DIPHTHERIA TOXIN REPRESSOR-DNA COMPLEX REVEALS A METAL BINDING SH-LIKE DOMAIN
13.0	13.0	13.0	57.0
16.0	13.0	13.0	54.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14285
#Short = 1c7u_B
#Long = MYOCYTE-SPECIFIC ENHANCER FACTOR 2A, C4 FORM
#W = 6
#Organisms = Homo sapiens
#Description = Complex of the DNA binding core domain of the transcription factor MEF2A with a 20mer oligonucleotide
0.0	96.0	0.0	0.0
16.0	13.0	54.0	13.0
24.0	24.0	24.0	24.0
13.0	57.0	13.0	13.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14286
#Short = 1cdw_A
#Long = PROTEIN (TATA BINDING PROTEIN (TBP))
#W = 8
#Organisms = Homo sapiens
#Description = HUMAN TBP CORE DOMAIN COMPLEXED WITH DNA
13.0	54.0	13.0	16.0
0.0	0.0	0.0	96.0
13.0	13.0	13.0	57.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14287
#Short = 1cf7_A
#Long = PROTEIN (TRANSCRIPTION FACTOR E2F-4)
#W = 7
#Organisms = Homo sapiens
#Description = STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
19.0	57.0	9.0	11.0
19.0	19.0	49.0	9.0
86.0	1.0	9.0	0.0

#ID = F3D14288
#Short = 1cf7_AB
#Long = PROTEIN (TRANSCRIPTION FACTOR E2F-4)
#W = 7
#Organisms = Homo sapiens
#Description = STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP
13.0	68.0	13.0	2.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
13.0	0.0	83.0	0.0
54.0	16.0	13.0	13.0

#ID = F3D14289
#Short = 1cf7_B
#Long = PROTEIN (TRANSCRIPTION FACTOR DP-2)
#W = 5
#Organisms = Homo sapiens
#Description = STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP
1.0	76.0	19.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
38.0	19.0	19.0	20.0

#ID = F3D14290
#Short = 1cgp_AB
#Long = PROTEIN (CATABOLITE GENE ACTIVATOR PROTEIN (CAP))
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
5.0	13.0	5.0	73.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
73.0	5.0	13.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
12.0	11.0	62.0	11.0
0.0	0.0	11.0	85.0
0.0	96.0	0.0	0.0
79.0	5.0	7.0	5.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14291
#Short = 1cit_A
#Long = PROTEIN (ORPHAN NUCLEAR RECEPTOR NGFI-B)
#W = 9
#Organisms = Rattus norvegicus
#Description = DNA-BINDING MECHANISM OF THE MONOMERIC ORPHAN NUCLEAR RECEPTOR NGFI-B
9.0	7.0	7.0	73.0
7.0	7.0	73.0	9.0
73.0	7.0	9.0	7.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
7.0	7.0	9.0	73.0
0.0	0.0	0.0	96.0

#ID = F3D14292
#Short = 1cjg_AB
#Long = PROTEIN (LAC REPRESSOR)
#W = 10
#Organisms = Escherichia coli (strain K12)
#Description = NMR STRUCTURE OF LAC REPRESSOR HP62-DNA COMPLEX
4.0	4.0	7.0	81.0
7.0	9.0	76.0	4.0
84.0	4.0	4.0	4.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
4.0	7.0	4.0	81.0
4.0	84.0	4.0	4.0
81.0	4.0	4.0	7.0

#ID = F3D14293
#Short = 1cjg_B
#Long = PROTEIN (LAC REPRESSOR)
#W = 5
#Organisms = Escherichia coli (strain K12)
#Description = NMR STRUCTURE OF LAC REPRESSOR HP62-DNA COMPLEX
8.0	8.0	8.0	72.0
8.0	8.0	63.0	17.0
69.0	8.0	8.0	11.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14294
#Short = 1cma_AB
#Long = PROTEIN (MET REPRESSOR)
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = MET REPRESSOR/DNA COMPLEX + S-ADENOSYL-METHIONINE
24.0	24.0	36.0	12.0
0.0	0.0	96.0	0.0
60.0	12.0	12.0	12.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0

#ID = F3D14295
#Short = 1co0_AB
#Long = TRP OPERON REPRESSOR
#W = 15
#Organisms = Escherichia coli (strain K12)
#Description = NMR STUDY OF TRP REPRESSOR-MTR OPERATOR DNA COMPLEX
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
57.0	13.0	13.0	13.0
13.0	13.0	54.0	16.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14296
#Short = 1cqt_AI
#Long = POU DOMAIN, CLASS 2, TRANSCRIPTION FACTOR 1
#W = 10
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT
9.0	9.0	9.0	69.0
96.0	0.0	0.0	0.0
0.0	1.0	9.0	86.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
76.0	11.0	0.0	9.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
67.0	9.0	9.0	11.0

#ID = F3D14297
#Short = 1cqt_BJ
#Long = POU DOMAIN, CLASS 2, TRANSCRIPTION FACTOR 1
#W = 10
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
9.0	11.0	9.0	67.0
9.0	9.0	69.0	9.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
67.0	9.0	9.0	11.0

#ID = F3D14298
#Short = 1d3u_AB
#Long = TATA-BINDING PROTEIN
#W = 15
#Organisms = Pyrococcus woesei
#Description = TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/BRE+TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
9.0	6.0	6.0	75.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
75.0	6.0	9.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
6.0	6.0	13.0	71.0
71.0	13.0	6.0	6.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14299
#Short = 1ddn_ABCD
#Long = DIPHTHERIA TOX REPRESSOR
#W = 15
#Organisms = Corynebacterium diphtheriae,strain ATCC 700971 / NCTC 13129 / Biotype gravis
#Description = DIPHTHERIA TOX REPRESSOR (C102D MUTANT)/TOX DNA OPERATOR COMPLEX
84.0	3.0	3.0	6.0
7.0	12.0	66.0	11.0
0.0	0.0	96.0	0.0
3.0	3.0	9.0	81.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
62.0	11.0	16.0	7.0
0.0	3.0	0.0	93.0
0.0	96.0	0.0	0.0
14.0	59.0	16.0	7.0
0.0	0.0	0.0	96.0

#ID = F3D14300
#Short = 1ddn_B
#Long = DIPHTHERIA TOX REPRESSOR
#W = 6
#Organisms = Corynebacterium diphtheriae,strain ATCC 700971 / NCTC 13129 / Biotype gravis
#Description = DIPHTHERIA TOX REPRESSOR (C102D MUTANT)/TOX DNA OPERATOR COMPLEX
7.0	7.0	9.0	73.0
9.0	7.0	7.0	73.0
96.0	0.0	0.0	0.0
7.0	7.0	73.0	9.0
0.0	0.0	96.0	0.0
7.0	7.0	7.0	75.0

#ID = F3D14301
#Short = 1dh3_AC
#Long = TRANSCRIPTION FACTOR CREB
#W = 8
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF A CREB BZIP-CRE COMPLEX REVEALS THE BASIS FOR CREB FAIMLY SELECTIVE DIMERIZATION AND DNA BINDING
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
13.0	70.0	13.0	0.0
0.0	0.0	83.0	13.0
24.0	24.0	24.0	24.0
13.0	54.0	13.0	16.0
96.0	0.0	0.0	0.0

#ID = F3D14302
#Short = 1dh3_C
#Long = TRANSCRIPTION FACTOR CREB
#W = 5
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF A CREB BZIP-CRE COMPLEX REVEALS THE BASIS FOR CREB FAIMLY SELECTIVE DIMERIZATION AND DNA BINDING
9.0	69.0	9.0	9.0
9.0	9.0	67.0	11.0
24.0	24.0	24.0	24.0
11.0	67.0	9.0	9.0
96.0	0.0	0.0	0.0

#ID = F3D14303
#Short = 1dsz_AB
#Long = RETINOIC ACID RECEPTOR ALPHA
#W = 12
#Organisms = Homo sapiens
#Description = STRUCTURE OF THE RXR/RAR DNA-BINDING DOMAIN HETERODIMER IN COMPLEX WITH THE RETINOIC ACID RESPONSE ELEMENT DR1
16.0	6.0	6.0	68.0
0.0	0.0	96.0	0.0
90.0	0.0	6.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
6.0	64.0	6.0	20.0
24.0	24.0	24.0	24.0
6.0	0.0	6.0	84.0
0.0	0.0	96.0	0.0
77.0	0.0	13.0	6.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14304
#Short = 1dsz_B
#Long = RETINOIC ACID RECEPTOR RXR-ALPHA
#W = 5
#Organisms = Homo sapiens
#Description = STRUCTURE OF THE RXR/RAR DNA-BINDING DOMAIN HETERODIMER IN COMPLEX WITH THE RETINOIC ACID RESPONSE ELEMENT DR1
19.0	19.0	19.0	39.0
0.0	0.0	96.0	0.0
76.0	1.0	19.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14305
#Short = 1dux_F
#Long = ETS-DOMAIN PROTEIN ELK-1
#W = 7
#Organisms = Homo sapiens
#Description = ELK-1/DNA STRUCTURE REVEALS HOW RESIDUES DISTAL FROM DNA-BINDING SURFACE AFFECT DNA-RECOGNITION
11.0	57.0	9.0	19.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
76.0	9.0	9.0	2.0
24.0	24.0	24.0	24.0
19.0	9.0	57.0	11.0

#ID = F3D14306
#Short = 1e3o_C
#Long = OCTAMER-BINDING TRANSCRIPTION FACTOR 1
#W = 7
#Organisms = Homo sapiens
#Description = Crystal structure of Oct-1 POU dimer bound to MORE
96.0	0.0	0.0	0.0
9.0	9.0	9.0	69.0
9.0	9.0	67.0	11.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
9.0	9.0	69.0	9.0

#ID = F3D14307
#Short = 1ea4_DEFG
#Long = TRANSCRIPTIONAL REPRESSOR COPG
#W = 17
#Organisms = Streptococcus agalactiae
#Description = TRANSCRIPTIONAL REPRESSOR COPG/22BP DSDNA COMPLEX
0.0	96.0	0.0	0.0
2.0	4.0	13.0	77.0
6.0	9.0	4.0	77.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
4.0	68.0	13.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
59.0	13.0	9.0	15.0
4.0	77.0	4.0	11.0

#ID = F3D14308
#Short = 1ea4_HKL
#Long = TRANSCRIPTIONAL REPRESSOR COPG
#W = 13
#Organisms = Streptococcus agalactiae
#Description = TRANSCRIPTIONAL REPRESSOR COPG/22BP DSDNA COMPLEX
5.0	15.0	0.0	76.0
0.0	0.0	96.0	0.0
5.0	80.0	6.0	5.0
96.0	0.0	0.0	0.0
16.0	15.0	10.0	55.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
15.0	11.0	60.0	10.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
80.0	1.0	15.0	0.0

#ID = F3D14309
#Short = 1ea4_K
#Long = TRANSCRIPTIONAL REPRESSOR COPG
#W = 4
#Organisms = Streptococcus agalactiae
#Description = TRANSCRIPTIONAL REPRESSOR COPG/22BP DSDNA COMPLEX
11.0	9.0	9.0	67.0
9.0	9.0	67.0	11.0
11.0	67.0	9.0	9.0
96.0	0.0	0.0	0.0

#ID = F3D14310
#Short = 1efa_AB
#Long = LAC REPRESSOR
#W = 15
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF THE LAC REPRESSOR DIMER BOUND TO OPERATOR AND THE ANTI-INDUCER ONPF
4.0	0.0	0.0	92.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
8.0	0.0	88.0	0.0
80.0	3.0	10.0	3.0
3.0	0.0	90.0	3.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
6.0	72.0	7.0	11.0
3.0	3.0	2.0	88.0
7.0	86.0	3.0	0.0
76.0	0.0	19.0	1.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
76.0	6.0	7.0	7.0

#ID = F3D14311
#Short = 1efa_B
#Long = LAC REPRESSOR
#W = 9
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF THE LAC REPRESSOR DIMER BOUND TO OPERATOR AND THE ANTI-INDUCER ONPF
7.0	73.0	9.0	7.0
0.0	0.0	96.0	0.0
7.0	73.0	9.0	7.0
7.0	9.0	7.0	73.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
73.0	7.0	9.0	7.0

#ID = F3D14312
#Short = 1egw_AB
#Long = MADS BOX TRANSCRIPTION ENHANCER FACTOR 2, POLYPEPT
#W = 10
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF MEF2A CORE BOUND TO DNA
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
60.0	12.0	12.0	12.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	12.0	0.0	84.0
96.0	0.0	0.0	0.0
12.0	12.0	60.0	12.0

#ID = F3D14313
#Short = 1exi_A
#Long = MULTIDRUG-EFFLUX TRANSPORTER REGULATOR
#W = 4
#Organisms = Bacillus subtilis,strain 168
#Description = CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPSB
9.0	69.0	9.0	9.0
11.0	67.0	9.0	9.0
9.0	69.0	9.0	9.0
0.0	0.0	0.0	96.0

#ID = F3D14314
#Short = 1exj_A
#Long = MULTIDRUG-EFFLUX TRANSPORTER REGULATOR
#W = 4
#Organisms = Bacillus subtilis,strain 168
#Description = CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPP
13.0	54.0	16.0	13.0
0.0	96.0	0.0	0.0
13.0	54.0	13.0	16.0
0.0	0.0	0.0	96.0

#ID = F3D14315
#Short = 1f2i_IJ
#Long = FUSION OF N-TERMINAL 17-MER PEPTIDE EXTENSION TO Z
#W = 12
#Organisms = Mus musculus
#Description = COCRYSTAL STRUCTURE OF SELECTED ZINC FINGER DIMER BOUND TO DNA
9.0	11.0	9.0	67.0
1.0	0.0	86.0	9.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
9.0	11.0	76.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
67.0	11.0	9.0	9.0

#ID = F3D14316
#Short = 1f2i_J
#Long = FUSION OF N-TERMINAL 17-MER PEPTIDE EXTENSION TO Z
#W = 6
#Organisms = Mus musculus
#Description = COCRYSTAL STRUCTURE OF SELECTED ZINC FINGER DIMER BOUND TO DNA
12.0	12.0	12.0	60.0
0.0	10.0	74.0	12.0
0.0	0.0	96.0	0.0
0.0	0.0	95.0	1.0
13.0	74.0	5.0	4.0
5.0	4.0	82.0	5.0

#ID = F3D14317
#Short = 1f2i_KL
#Long = FUSION OF N-TERMINAL 17-MER PEPTIDE EXTENSION TO Z
#W = 12
#Organisms = Mus musculus
#Description = COCRYSTAL STRUCTURE OF SELECTED ZINC FINGER DIMER BOUND TO DNA
16.0	13.0	13.0	54.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
54.0	13.0	13.0	16.0

#ID = F3D14318
#Short = 1f4s_P
#Long = ETHANOL REGULON TRANSCRIPTIONAL FACTOR
#W = 9
#Organisms = Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
#Description = STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA
10.0	0.0	86.0	0.0
0.0	0.0	0.0	96.0
10.0	12.0	74.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
10.0	0.0	10.0	76.0
10.0	64.0	12.0	10.0

#ID = F3D14319
#Short = 1f5e_P
#Long = ETHANOL REGULON TRANSCRIPTIONAL FACTOR
#W = 8
#Organisms = Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
#Description = STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA
16.0	13.0	54.0	13.0
0.0	0.0	0.0	96.0
16.0	13.0	54.0	13.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14320
#Short = 1f5t_A
#Long = DIPHTHERIA TOXIN REPRESSOR
#W = 4
#Organisms = Corynebacterium diphtheriae,strain ATCC 700971 / NCTC 13129 / Biotype gravis
#Description = DIPHTHERIA TOX REPRESSOR (C102D MUTANT) COMPLEXED WITH NICKEL AND DTXR CONSENSUS BINDING SEQUENCE
9.0	9.0	69.0	9.0
0.0	0.0	96.0	0.0
11.0	67.0	9.0	9.0
11.0	9.0	9.0	67.0

#ID = F3D14321
#Short = 1fjl_B
#Long = PAIRED PROTEIN
#W = 7
#Organisms = Drosophila melanogaster
#Description = HOMEODOMAIN FROM THE DROSOPHILA PAIRED PROTEIN BOUND TO A DNA OLIGONUCLEOTIDE
9.0	9.0	11.0	67.0
24.0	24.0	24.0	24.0
69.0	9.0	9.0	9.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
9.0	67.0	9.0	11.0

#ID = F3D14322
#Short = 1fos_E
#Long = P55-C-FOS PROTO-ONCOGENE PROTEIN
#W = 5
#Organisms = Homo sapiens
#Description = TWO HUMAN C-FOS:C-JUN:DNA COMPLEXES
67.0	11.0	9.0	9.0
0.0	0.0	96.0	0.0
9.0	9.0	9.0	69.0
9.0	67.0	11.0	9.0
96.0	0.0	0.0	0.0

#ID = F3D14323
#Short = 1fos_EF
#Long = P55-C-FOS PROTO-ONCOGENE PROTEIN
#W = 7
#Organisms = Homo sapiens
#Description = TWO HUMAN C-FOS:C-JUN:DNA COMPLEXES
10.0	10.0	11.0	65.0
21.0	21.0	33.0	21.0
86.0	3.0	4.0	3.0
0.0	16.0	78.0	2.0
7.0	7.0	10.0	72.0
13.0	56.0	14.0	13.0
76.0	7.0	7.0	6.0

#ID = F3D14324
#Short = 1fos_GH
#Long = P55-C-FOS PROTO-ONCOGENE PROTEIN
#W = 8
#Organisms = Homo sapiens
#Description = TWO HUMAN C-FOS:C-JUN:DNA COMPLEXES
12.0	12.0	60.0	12.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
48.0	12.0	12.0	24.0

#ID = F3D14325
#Short = 1g2d_F
#Long = TATA BOX ZINC FINGER PROTEIN
#W = 10
#Organisms = Mus musculus
#Description = STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (CLONE #2)
12.0	60.0	12.0	12.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
12.0	12.0	12.0	60.0
96.0	0.0	0.0	0.0
84.0	0.0	12.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14326
#Short = 1g2f_F
#Long = TATA BOX ZINC FINGER PROTEIN
#W = 11
#Organisms = Mus musculus
#Description = STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (TATAZF;CLONE #6)
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
77.0	0.0	19.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
19.0	20.0	38.0	19.0

#ID = F3D14327
#Short = 1ga5_AB
#Long = ORPHAN NUCLEAR RECEPTOR NR1D1
#W = 17
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA-BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT
4.0	4.0	4.0	84.0
0.0	0.0	96.0	0.0
9.0	79.0	4.0	4.0
0.0	96.0	0.0	0.0
1.0	91.0	4.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	4.0	6.0	86.0
0.0	0.0	96.0	0.0
91.0	0.0	1.0	4.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
9.0	9.0	6.0	72.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	11.0	4.0	72.0

#ID = F3D14328
#Short = 1gat_A
#Long = ERYTHROID TRANSCRIPTION FACTOR GATA-1
#W = 5
#Organisms = Gallus gallus
#Description = SOLUTION STRUCTURE OF THE SPECIFIC DNA COMPLEX OF THE ZINC CONTAINING DNA BINDING DOMAIN OF THE ERYTHROID TRANSCRIPTION FACTOR GATA-1 BY MULTIDIMENSIONAL NMR
9.0	11.0	9.0	67.0
86.0	0.0	9.0	1.0
9.0	0.0	0.0	87.0
9.0	69.0	9.0	9.0
9.0	0.0	1.0	86.0

#ID = F3D14329
#Short = 1gau_A
#Long = ERYTHROID TRANSCRIPTION FACTOR GATA-1
#W = 5
#Organisms = Gallus gallus
#Description = SOLUTION STRUCTURE OF THE SPECIFIC DNA COMPLEX OF THE ZINC CONTAINING DNA BINDING DOMAIN OF THE ERYTHROID TRANSCRIPTION FACTOR GATA-1 BY MULTIDIMENSIONAL NMR
13.0	16.0	13.0	54.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
13.0	13.0	13.0	57.0

#ID = F3D14330
#Short = 1gd2_G
#Long = TRANSCRIPTION FACTOR PAP1
#W = 7
#Organisms = Schizosaccharomyces pombe,Schizosaccharomyces pombe (strain 972 / ATCC 24843)
#Description = CRYSTAL STRUCTURE OF BZIP TRANSCRIPTION FACTOR PAP1 BOUND TO DNA
8.0	8.0	69.0	11.0
0.0	0.0	88.0	8.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
69.0	8.0	11.0	8.0
0.0	96.0	0.0	0.0
8.0	8.0	72.0	8.0

#ID = F3D14331
#Short = 1gd2_GH
#Long = TRANSCRIPTION FACTOR PAP1
#W = 12
#Organisms = Schizosaccharomyces pombe,Schizosaccharomyces pombe (strain 972 / ATCC 24843)
#Description = CRYSTAL STRUCTURE OF BZIP TRANSCRIPTION FACTOR PAP1 BOUND TO DNA
6.0	6.0	78.0	6.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
78.0	6.0	6.0	6.0
0.0	96.0	0.0	0.0
6.0	0.0	84.0	6.0
6.0	6.0	6.0	78.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
6.0	90.0	0.0	0.0
6.0	78.0	6.0	6.0

#ID = F3D14332
#Short = 1gji_A
#Long = C-REL PROTO-ONCOGENE PROTEIN
#W = 5
#Organisms = Gallus gallus
#Description = Crystal structure of c-Rel bound to DNA
13.0	27.0	2.0	54.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
41.0	27.0	13.0	15.0

#ID = F3D14333
#Short = 1gji_AB
#Long = C-REL PROTO-ONCOGENE PROTEIN
#W = 8
#Organisms = Gallus gallus
#Description = Crystal structure of c-Rel bound to DNA
0.0	0.0	96.0	0.0
1.0	0.0	86.0	9.0
96.0	0.0	0.0	0.0
9.0	9.0	11.0	67.0
24.0	24.0	24.0	24.0
11.0	9.0	9.0	67.0
9.0	9.0	2.0	76.0
0.0	96.0	0.0	0.0

#ID = F3D14334
#Short = 1glu_AB
#Long = PROTEIN (GLUCOCORTICOID RECEPTOR)
#W = 15
#Organisms = Rattus norvegicus
#Description = CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA
73.0	7.0	9.0	7.0
9.0	7.0	73.0	7.0
24.0	24.0	24.0	24.0
73.0	9.0	7.0	7.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
7.0	73.0	7.0	9.0

#ID = F3D14335
#Short = 1gt0_C
#Long = OCTAMER-BINDING TRANSCRIPTION FACTOR 1
#W = 9
#Organisms = Homo sapiens
#Description = Crystal structure of a POU/HMG/DNA ternary complex
8.0	8.0	69.0	11.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	8.0	1.0	87.0
69.0	8.0	8.0	11.0
96.0	0.0	0.0	0.0
8.0	11.0	8.0	69.0

#ID = F3D14336
#Short = 1gt0_CD
#Long = OCTAMER-BINDING TRANSCRIPTION FACTOR 1
#W = 18
#Organisms = Homo sapiens,Mus musculus
#Description = Crystal structure of a POU/HMG/DNA ternary complex
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
12.0	0.0	84.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
12.0	6.0	72.0	6.0
6.0	6.0	78.0	6.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	6.0	0.0	90.0
78.0	6.0	6.0	6.0
96.0	0.0	0.0	0.0
6.0	6.0	6.0	78.0

#ID = F3D14337
#Short = 1gt0_D
#Long = TRANSCRIPTION FACTOR SOX-2
#W = 9
#Organisms = Mus musculus
#Description = Crystal structure of a POU/HMG/DNA ternary complex
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
19.0	1.0	76.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
19.0	19.0	39.0	19.0

#ID = F3D14338
#Short = 1gtw_B
#Long = CAAT/ENHANCER BINDING PROTEIN BETA
#W = 5
#Organisms = Homo sapiens
#Description = crystal structure of C/EBPbeta bZip homodimer bound to a DNA fragment from the tom-1A promoter
5.0	5.0	82.0	4.0
2.0	88.0	3.0	3.0
4.0	82.0	6.0	4.0
75.0	6.0	8.0	7.0
14.0	45.0	14.0	23.0

#ID = F3D14339
#Short = 1gu4_AB
#Long = CAAT/ENHANCER BINDING PROTEIN BETA
#W = 8
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF C/EBPBETA BZIP DIMERIC BOUND TO A HIGH AFFINITY DNA FRAGMENT
9.0	9.0	10.0	68.0
3.0	9.0	0.0	84.0
44.0	5.0	41.0	6.0
4.0	82.0	4.0	6.0
14.0	7.0	70.0	5.0
1.0	95.0	0.0	0.0
84.0	0.0	9.0	3.0
78.0	6.0	7.0	5.0

#ID = F3D14340
#Short = 1gu4_B
#Long = CAAT/ENHANCER BINDING PROTEIN BETA
#W = 4
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF C/EBPBETA BZIP DIMERIC BOUND TO A HIGH AFFINITY DNA FRAGMENT
22.0	15.0	45.0	14.0
1.0	95.0	0.0	0.0
84.0	0.0	10.0	2.0
78.0	6.0	7.0	5.0

#ID = F3D14341
#Short = 1gu5_AB
#Long = CAAT/ENHANCER BINDING PROTEIN BETA
#W = 9
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF C/EBPBETA BZIP DIMERIC BOUND TO A DNA FRAGMENT FROM THE MIM-1 PROMOTER
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
12.0	12.0	60.0	12.0
24.0	24.0	24.0	24.0
12.0	60.0	12.0	12.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	84.0	0.0	12.0

#ID = F3D14342
#Short = 1gxp_A
#Long = PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTE
#W = 10
#Organisms = Escherichia coli (strain K12)
#Description = PHOB EFFECTOR DOMAIN IN COMPLEX WITH PHO BOX DNA.
3.0	86.0	3.0	4.0
3.0	3.0	4.0	86.0
18.0	15.0	14.0	49.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
12.0	20.0	49.0	15.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
86.0	3.0	3.0	4.0

#ID = F3D14343
#Short = 1gxp_AB
#Long = PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTE
#W = 19
#Organisms = Escherichia coli (strain K12)
#Description = PHOB EFFECTOR DOMAIN IN COMPLEX WITH PHO BOX DNA.
6.0	78.0	3.0	9.0
9.0	75.0	6.0	6.0
24.0	24.0	24.0	24.0
13.0	16.0	13.0	54.0
1.0	3.0	89.0	3.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
90.0	3.0	0.0	3.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
6.0	6.0	6.0	78.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	78.0	6.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14344
#Short = 1h0m_AB
#Long = TRANSCRIPTIONAL ACTIVATOR PROTEIN TRAR
#W = 12
#Organisms = Agrobacterium tumefaciens,Rhizobium radiobacter (Agrobacterium tumefaciens)
#Description = THREE-DIMENSIONAL STRUCTURE OF THE QUORUM SENSING PROTEIN TRAR BOUND TO ITS AUTOINDUCER AND TO ITS TARGET DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
21.0	33.0	21.0	21.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
21.0	12.0	42.0	21.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14345
#Short = 1h0m_B
#Long = TRANSCRIPTIONAL ACTIVATOR PROTEIN TRAR
#W = 4
#Organisms = Agrobacterium tumefaciens,Rhizobium radiobacter (Agrobacterium tumefaciens)
#Description = THREE-DIMENSIONAL STRUCTURE OF THE QUORUM SENSING PROTEIN TRAR BOUND TO ITS AUTOINDUCER AND TO ITS TARGET DNA
13.0	16.0	54.0	13.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
13.0	57.0	13.0	13.0

#ID = F3D14346
#Short = 1h6f_AB
#Long = T-BOX TRANSCRIPTION FACTOR TBX3
#W = 18
#Organisms = Homo sapiens
#Description = HUMAN TBX3, A TRANSCRIPTION FACTOR RESPONSIBLE FOR ULNAR-MAMMARY SYNDROME , BOUND TO A PALINDROMIC DNA SITE
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	94.0	1.0	1.0
9.0	59.0	21.0	7.0
5.0	15.0	9.0	67.0
57.0	21.0	9.0	9.0
0.0	2.0	94.0	0.0
9.0	7.0	61.0	19.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0

#ID = F3D14347
#Short = 1h6f_B
#Long = T-BOX TRANSCRIPTION FACTOR TBX3
#W = 7
#Organisms = Homo sapiens
#Description = HUMAN TBX3, A TRANSCRIPTION FACTOR RESPONSIBLE FOR ULNAR-MAMMARY SYNDROME , BOUND TO A PALINDROMIC DNA SITE
9.0	9.0	11.0	67.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
67.0	9.0	11.0	9.0
19.0	67.0	9.0	1.0

#ID = F3D14348
#Short = 1h88_ABC
#Long = CCAAT/ENHANCER BINDING PROTEIN BETA
#W = 20
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX1
9.0	7.0	76.0	4.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
16.0	72.0	4.0	4.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
7.0	4.0	4.0	81.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
9.0	6.0	72.0	9.0
0.0	10.0	86.0	0.0
81.0	4.0	7.0	4.0

#ID = F3D14349
#Short = 1h88_B
#Long = CCAAT/ENHANCER BINDING PROTEIN BETA
#W = 5
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX1
25.0	13.0	46.0	12.0
6.0	4.0	4.0	82.0
4.0	4.0	83.0	5.0
3.0	2.0	89.0	2.0
10.0	70.0	9.0	7.0

#ID = F3D14350
#Short = 1h89_ABC
#Long = CAAT/ENHANCER BINDING PROTEIN BETA
#W = 19
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX2
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
10.0	12.0	10.0	64.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
10.0	10.0	76.0	0.0
0.0	0.0	96.0	0.0
64.0	10.0	10.0	12.0

#ID = F3D14351
#Short = 1h89_C
#W = 7
12.0	12.0	12.0	60.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
12.0	0.0	84.0	0.0
0.0	0.0	96.0	0.0
60.0	12.0	12.0	12.0

#ID = F3D14352
#Short = 1h8a_ABC
#Long = CAAT/ENHANCER BINDING PROTEIN BETA
#W = 20
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX3
4.0	4.0	84.0	4.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
8.0	87.0	1.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
8.0	62.0	6.0	20.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	4.0	4.0	84.0
96.0	0.0	0.0	0.0
91.0	0.0	0.0	5.0
0.0	96.0	0.0	0.0
8.0	9.0	75.0	4.0
0.0	0.0	96.0	0.0
79.0	4.0	9.0	4.0

#ID = F3D14353
#Short = 1h8a_C
#W = 7
8.0	8.0	11.0	69.0
96.0	0.0	0.0	0.0
87.0	1.0	0.0	8.0
0.0	96.0	0.0	0.0
11.0	8.0	69.0	8.0
0.0	0.0	96.0	0.0
69.0	8.0	11.0	8.0

#ID = F3D14354
#Short = 1h9d_C
#Long = CORE-BINDING FACTOR ALPHA SUBUNIT1
#W = 7
#Organisms = Homo sapiens
#Description = AML1/CBF-BETA/DNA COMPLEX
10.0	69.0	0.0	17.0
52.0	17.0	10.0	17.0
62.0	0.0	17.0	17.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14355
#Short = 1h9t_AB
#Long = FATTY ACID METABOLISM REGULATOR PROTEIN
#W = 11
#Organisms = Escherichia coli (strain K12)
#Description = FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATOR
10.0	10.0	12.0	64.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
7.0	10.0	10.0	69.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
10.0	12.0	58.0	16.0
74.0	5.0	12.0	5.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
90.0	0.0	5.0	1.0

#ID = F3D14356
#Short = 1hbx_ABG
#Long = SERUM RESPONSE FACTOR
#W = 17
#Organisms = Homo sapiens
#Description = TERNARY COMPLEX OF SAP-1 AND SRF WITH SPECIFIC SRE DNA
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
89.0	3.0	2.0	2.0
24.0	24.0	24.0	24.0
12.0	11.0	2.0	71.0
0.0	96.0	0.0	0.0
20.0	72.0	2.0	2.0
4.0	5.0	14.0	73.0
94.0	0.0	2.0	0.0
79.0	2.0	2.0	13.0
2.0	2.0	3.0	89.0
2.0	2.0	0.0	92.0
87.0	4.0	2.0	3.0
0.0	0.0	96.0	0.0
2.0	2.0	21.0	71.0

#ID = F3D14357
#Short = 1hbx_D
#Long = SERUM RESPONSE FACTOR
#W = 9
#Organisms = Homo sapiens
#Description = TERNARY COMPLEX OF SAP-1 AND SRF WITH SPECIFIC SRE DNA
7.0	9.0	7.0	73.0
0.0	0.0	0.0	96.0
75.0	7.0	7.0	7.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
73.0	9.0	7.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	7.0	7.0	73.0

#ID = F3D14358
#Short = 1hbx_DEH
#Long = SERUM RESPONSE FACTOR
#W = 16
#Organisms = Homo sapiens
#Description = TERNARY COMPLEX OF SAP-1 AND SRF WITH SPECIFIC SRE DNA
0.0	80.0	1.0	15.0
3.0	13.0	13.0	67.0
94.0	1.0	0.0	1.0
78.0	13.0	1.0	4.0
5.0	0.0	1.0	90.0
0.0	0.0	0.0	96.0
90.0	1.0	4.0	1.0
1.0	0.0	94.0	1.0
0.0	17.0	78.0	1.0
57.0	15.0	13.0	11.0
24.0	24.0	24.0	24.0
1.0	1.0	1.0	93.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14359
#Short = 1hcq_AB
#Long = PROTEIN (ESTROGEN RECEPTOR)
#W = 13
#Organisms = Homo sapiens
#Description = THE CRYSTAL STRUCTURE OF THE ESTROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO DNA: HOW RECEPTORS DISCRIMINATE BETWEEN THEIR RESPONSE ELEMENTS
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
9.0	9.0	11.0	67.0
0.0	96.0	0.0	0.0
67.0	9.0	11.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	11.0	9.0	67.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14360
#Short = 1hcq_E
#Long = PROTEIN (ESTROGEN RECEPTOR)
#W = 5
#Organisms = Homo sapiens
#Description = THE CRYSTAL STRUCTURE OF THE ESTROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO DNA: HOW RECEPTORS DISCRIMINATE BETWEEN THEIR RESPONSE ELEMENTS
27.0	13.0	15.0	41.0
0.0	0.0	96.0	0.0
54.0	13.0	27.0	2.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14361
#Short = 1hcq_EF
#Long = PROTEIN (ESTROGEN RECEPTOR)
#W = 13
#Organisms = Homo sapiens
#Description = THE CRYSTAL STRUCTURE OF THE ESTROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO DNA: HOW RECEPTORS DISCRIMINATE BETWEEN THEIR RESPONSE ELEMENTS
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
8.0	11.0	8.0	69.0
0.0	96.0	0.0	0.0
69.0	8.0	8.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	11.0	8.0	69.0
0.0	0.0	96.0	0.0
87.0	1.0	8.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14362
#Short = 1hdd_CD
#Long = PROTEIN (ENGRAILED HOMEODOMAIN)
#W = 12
#Organisms = Drosophila melanogaster
#Description = CRYSTAL STRUCTURE OF AN ENGRAILED HOMEODOMAIN-DNA COMPLEX AT 2.8 ANGSTROMS RESOLUTION: A FRAMEWORK FOR UNDERSTANDING HOMEODOMAIN-DNA INTERACTIONS
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
7.0	0.0	8.0	81.0
24.0	24.0	24.0	24.0
68.0	0.0	14.0	14.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
7.0	9.0	7.0	73.0
24.0	24.0	24.0	24.0
59.0	23.0	7.0	7.0

#ID = F3D14363
#Short = 1hf0_AB
#Long = OCTAMER-BINDING TRANSCRIPTION FACTOR 1
#W = 17
#Organisms = Homo sapiens
#Description = Crystal structure of the DNA-binding domain of Oct-1 bound to DNA as a dimer
0.0	80.0	0.0	16.0
16.0	3.0	74.0	3.0
0.0	0.0	0.0	96.0
6.0	6.0	8.0	76.0
3.0	1.0	0.0	92.0
0.0	0.0	96.0	0.0
73.0	3.0	17.0	3.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
4.0	3.0	80.0	9.0
11.0	6.0	73.0	6.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	3.0	1.0	92.0
16.0	0.0	80.0	0.0

#ID = F3D14364
#Short = 1hf0_B
#Long = OCTAMER-BINDING TRANSCRIPTION FACTOR 1
#W = 9
#Organisms = Homo sapiens
#Description = Crystal structure of the DNA-binding domain of Oct-1 bound to DNA as a dimer
0.0	88.0	0.0	8.0
24.0	8.0	56.0	8.0
0.0	0.0	0.0	96.0
16.0	8.0	16.0	56.0
8.0	0.0	0.0	88.0
0.0	0.0	96.0	0.0
88.0	0.0	8.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14365
#Short = 1hjb_ABC
#Long = CCAAT/ENHANCER BINDING PROTEIN BETA
#W = 19
#Organisms = Homo sapiens,Mus musculus
#Description = CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP DIMERIC BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
0.0	69.0	4.0	23.0
68.0	14.0	0.0	14.0
52.0	17.0	14.0	13.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
90.0	2.0	2.0	2.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	4.0	2.0	90.0
0.0	0.0	0.0	96.0
0.0	5.0	7.0	84.0
0.0	2.0	94.0	0.0
0.0	0.0	96.0	0.0
93.0	2.0	0.0	1.0
93.0	0.0	2.0	1.0
96.0	0.0	0.0	0.0

#ID = F3D14366
#Short = 1hjb_DEF
#Long = CCAAT/ENHANCER BINDING PROTEIN BETA
#W = 18
#Organisms = Homo sapiens,Mus musculus
#Description = CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP DIMERIC BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
85.0	3.0	2.0	6.0
78.0	6.0	6.0	6.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
89.0	2.0	2.0	3.0
0.0	96.0	0.0	0.0
89.0	3.0	2.0	2.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	19.0	3.0	74.0
2.0	2.0	2.0	90.0
2.0	2.0	89.0	3.0
0.0	0.0	96.0	0.0
74.0	8.0	6.0	8.0
72.0	20.0	2.0	2.0
96.0	0.0	0.0	0.0

#ID = F3D14367
#Short = 1hjc_D
#Long = RUNT-RELATED TRANSCRIPTION FACTOR 1
#W = 8
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
6.0	78.0	0.0	12.0
64.0	12.0	14.0	6.0
51.0	14.0	19.0	12.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
83.0	0.0	7.0	6.0

#ID = F3D14368
#Short = 1hlo_AB
#Long = PROTEIN (TRANSCRIPTION FACTOR MAX)
#W = 8
#Organisms = Homo sapiens
#Description = THE CRYSTAL STRUCTURE OF AN INTACT HUMAN MAX-DNA COMPLEX: NEW INSIGHTS INTO MECHANISMS OF TRANSCRIPTIONAL CONTROL
19.0	39.0	19.0	19.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	1.0	19.0	76.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14369
#Short = 1hlz_AB
#Long = ORPHAN NUCLEAR RECEPTOR NR1D1
#W = 17
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA-BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT
0.0	4.0	5.0	87.0
0.0	0.0	96.0	0.0
68.0	8.0	12.0	8.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
12.0	4.0	12.0	68.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	4.0	4.0	88.0
0.0	0.0	96.0	0.0
84.0	4.0	4.0	4.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
76.0	8.0	4.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	4.0	0.0	91.0

#ID = F3D14370
#Short = 1hlz_B
#Long = ORPHAN NUCLEAR RECEPTOR NR1D1
#W = 10
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA-BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
13.0	13.0	16.0	54.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
13.0	16.0	13.0	54.0

#ID = F3D14371
#Short = 1hry_A
#Long = HUMAN SRY
#W = 6
#Organisms = Homo sapiens
#Description = THE 3D STRUCTURE OF THE HUMAN SRY-DNA COMPLEX SOLVED BY MULTID-DIMENSIONAL HETERONUCLEAR-EDITED AND-FILTERED NMR
13.0	16.0	54.0	13.0
13.0	16.0	13.0	54.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14372
#Short = 1hrz_A
#Long = HUMAN SRY
#W = 6
#Organisms = Homo sapiens
#Description = THE 3D STRUCTURE OF THE HUMAN SRY-DNA COMPLEX SOLVED BY MULTI-DIMENSIONAL HETERONUCLEAR-EDITED AND-FILTERED NMR
13.0	13.0	57.0	13.0
13.0	13.0	16.0	54.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14373
#Short = 1hw2_AB
#Long = FATTY ACID METABOLISM REGULATOR PROTEIN
#W = 11
#Organisms = Escherichia coli (strain K12)
#Description = FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA COLI
4.0	4.0	2.0	86.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
4.0	4.0	9.0	79.0
9.0	67.0	9.0	11.0
0.0	96.0	0.0	0.0
7.0	4.0	81.0	4.0
81.0	4.0	4.0	7.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
76.0	9.0	4.0	7.0

#ID = F3D14374
#Short = 1hwt_CD
#Long = PROTEIN (HEME ACTIVATOR PROTEIN)
#W = 12
#Organisms = Saccharomyces cerevisiae
#Description = STRUCTURE OF A HAP1/DNA COMPLEX REVEALS DRAMATICALLY ASYMMETRIC DNA BINDING BY A HOMODIMERIC PROTEIN
0.0	85.0	10.0	1.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
21.0	12.0	10.0	53.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
10.0	55.0	10.0	21.0

#ID = F3D14375
#Short = 1hwt_GH
#Long = PROTEIN (HEME ACTIVATOR PROTEIN)
#W = 12
#Organisms = Saccharomyces cerevisiae
#Description = STRUCTURE OF A HAP1/DNA COMPLEX REVEALS DRAMATICALLY ASYMMETRIC DNA BINDING BY A HOMODIMERIC PROTEIN
15.0	0.0	81.0	0.0
0.0	96.0	0.0	0.0
7.0	9.0	73.0	7.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
61.0	14.0	7.0	14.0
14.0	14.0	7.0	61.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14376
#Short = 1ic8_AB
#Long = HEPATOCYTE NUCLEAR FACTOR 1-ALPHA
#W = 19
#Organisms = Homo sapiens
#Description = HEPATOCYTE NUCLEAR FACTOR 1A BOUND TO DNA : MODY3 GENE PRODUCT
9.0	69.0	9.0	9.0
24.0	24.0	24.0	24.0
9.0	9.0	69.0	9.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
67.0	11.0	9.0	9.0

#ID = F3D14377
#Short = 1ic8_B
#Long = HEPATOCYTE NUCLEAR FACTOR 1-ALPHA
#W = 13
#Organisms = Homo sapiens
#Description = HEPATOCYTE NUCLEAR FACTOR 1A BOUND TO DNA : MODY3 GENE PRODUCT
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
3.0	64.0	0.0	29.0
10.0	7.0	60.0	19.0
60.0	9.0	17.0	10.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	7.0	8.0	78.0
92.0	1.0	0.0	3.0
0.0	0.0	0.0	96.0
1.0	14.0	17.0	64.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14378
#Short = 1if1_AB
#Long = PROTEIN (INTERFERON REGULATORY FACTOR 1)
#W = 14
#Organisms = Mus musculus
#Description = INTERFERON REGULATORY FACTOR 1 (IRF-1) COMPLEX WITH DNA
0.0	3.0	9.0	84.0
0.0	0.0	96.0	0.0
3.0	1.0	92.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
93.0	0.0	3.0	0.0
11.0	65.0	13.0	7.0
11.0	7.0	21.0	57.0
0.0	0.0	0.0	96.0
20.0	7.0	0.0	69.0
0.0	96.0	0.0	0.0
76.0	7.0	10.0	3.0

#ID = F3D14379
#Short = 1if1_B
#Long = PROTEIN (INTERFERON REGULATORY FACTOR 1)
#W = 6
#Organisms = Mus musculus
#Description = INTERFERON REGULATORY FACTOR 1 (IRF-1) COMPLEX WITH DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
54.0	4.0	22.0	16.0
83.0	4.0	5.0	4.0
48.0	20.0	12.0	16.0
4.0	4.0	84.0	4.0

#ID = F3D14380
#Short = 1ig7_A
#Long = Homeotic protein Msx-1
#W = 7
#Organisms = Mus musculus
#Description = Msx-1 Homeodomain/DNA Complex Structure
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
64.0	0.0	16.0	16.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
16.0	16.0	48.0	16.0

#ID = F3D14381
#Short = 1imh_C
#Long = NUCLEAR FACTOR OF ACTIVATED T CELLS 5
#W = 5
#Organisms = Homo sapiens
#Description = TonEBP/DNA COMPLEX
12.0	10.0	10.0	64.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
76.0	0.0	10.0	10.0
66.0	10.0	10.0	10.0

#ID = F3D14382
#Short = 1imh_CD
#Long = NUCLEAR FACTOR OF ACTIVATED T CELLS 5
#W = 11
#Organisms = Homo sapiens
#Description = TonEBP/DNA COMPLEX
12.0	10.0	10.0	64.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
74.0	2.0	10.0	10.0
64.0	10.0	12.0	10.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0

#ID = F3D14383
#Short = 1io4_ABC
#Long = CAAT/ENHANCER BINDING PROTEIN BETA
#W = 17
#Organisms = Homo sapiens,Mus musculus
#Description = CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
75.0	5.0	6.0	10.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
91.0	0.0	0.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	10.0	10.0	71.0
0.0	0.0	0.0	96.0
5.0	6.0	5.0	80.0
6.0	5.0	80.0	5.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
70.0	5.0	20.0	1.0
96.0	0.0	0.0	0.0

#ID = F3D14384
#Short = 1io4_B
#Long = CAAT/ENHANCER BINDING PROTEIN BETA
#W = 6
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
19.0	19.0	38.0	20.0
77.0	0.0	19.0	0.0

#ID = F3D14385
#Short = 1j46_A
#Long = SEX-DETERMINING REGION Y PROTEIN
#W = 7
#Organisms = Homo sapiens
#Description = 3D Solution NMR Structure of the Wild Type HMG-BOX Domain of the Human Male Sex Determining Factor Sry Complexed to DNA
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
7.0	7.0	7.0	75.0
7.0	7.0	9.0	73.0
7.0	7.0	73.0	9.0
0.0	0.0	0.0	96.0
7.0	7.0	73.0	9.0

#ID = F3D14386
#Short = 1j47_A
#Long = SEX-DETERMINING REGION Y PROTEIN
#W = 6
#Organisms = Homo sapiens
#Description = 3D Solution NMR Structure of the M9I Mutant of the HMG-Box Domain of the Human Male Sex Determining Factor SRY Complexed to DNA
1.0	0.0	89.0	6.0
0.0	0.0	6.0	90.0
6.0	8.0	6.0	76.0
6.0	8.0	6.0	76.0
6.0	6.0	78.0	6.0
8.0	6.0	6.0	76.0

#ID = F3D14387
#Short = 1j5n_A
#Long = Nonhistone chromosomal protein 6A
#W = 7
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Solution Structure of the Non-Sequence-Specific HMGB protein NHP6A in complex with SRY DNA
96.0	0.0	0.0	0.0
76.0	0.0	19.0	1.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
19.0	38.0	20.0	19.0

#ID = F3D14388
#Short = 1je8_AB
#Long = Nitrate/Nitrite Response Regulator Protein NARL
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = Two-Component response regulator NarL/DNA Complex: DNA Bending Found in a High Affinity Site
0.0	0.0	0.0	96.0
61.0	8.0	17.0	10.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
19.0	8.0	61.0	8.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
8.0	8.0	8.0	72.0
96.0	0.0	0.0	0.0

#ID = F3D14389
#Short = 1je8_EF
#Long = Nitrate/Nitrite Response Regulator Protein NARL
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = Two-Component response regulator NarL/DNA Complex: DNA Bending Found in a High Affinity Site
0.0	0.0	0.0	96.0
67.0	9.0	9.0	11.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
69.0	9.0	9.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
9.0	11.0	9.0	67.0
96.0	0.0	0.0	0.0

#ID = F3D14390
#Short = 1jft_A
#Long = PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = PURINE REPRESSOR MUTANT-HYPOXANTHINE-PURF OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
9.0	67.0	9.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
67.0	9.0	9.0	11.0
0.0	96.0	0.0	0.0
9.0	9.0	67.0	11.0

#ID = F3D14391
#Short = 1jgg_AB
#Long = Segmentation Protein Even-Skipped
#W = 10
#Organisms = Drosophila melanogaster
#Description = Even-skipped Homeodomain Complexed to AT-rich DNA
64.0	19.0	9.0	4.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
4.0	24.0	54.0	14.0
69.0	9.0	4.0	14.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
38.0	0.0	58.0	0.0

#ID = F3D14392
#Short = 1jgg_B
#Long = Segmentation Protein Even-Skipped
#W = 4
#Organisms = Drosophila melanogaster
#Description = Even-skipped Homeodomain Complexed to AT-rich DNA
93.0	3.0	0.0	0.0
1.0	0.0	1.0	94.0
6.0	11.0	4.0	75.0
41.0	7.0	41.0	7.0

#ID = F3D14393
#Short = 1jh9_A
#Long = PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = STRUCTURE OF THE PURR-GUANINE-PURF OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
54.0	13.0	13.0	16.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
13.0	13.0	57.0	13.0

#ID = F3D14394
#Short = 1jj4_AB
#Long = Regulatory protein E2
#W = 16
#Organisms = Alphapapillomavirus 7,Human papillomavirus type 18
#Description = Human papillomavirus type 18 E2 DNA-binding domain bound to its DNA target
8.0	76.0	6.0	6.0
61.0	6.0	23.0	6.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	6.0	89.0	1.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
16.0	9.0	9.0	62.0
24.0	24.0	24.0	24.0
0.0	89.0	0.0	7.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
6.0	6.0	3.0	81.0
6.0	6.0	78.0	6.0

#ID = F3D14395
#Short = 1jj4_B
#Long = Regulatory protein E2
#W = 6
#Organisms = Alphapapillomavirus 7,Human papillomavirus type 18
#Description = Human papillomavirus type 18 E2 DNA-binding domain bound to its DNA target
8.0	69.0	11.0	8.0
0.0	0.0	96.0	0.0
0.0	1.0	87.0	8.0
0.0	0.0	0.0	96.0
8.0	8.0	11.0	69.0
8.0	8.0	72.0	8.0

#ID = F3D14396
#Short = 1jk1_A
#Long = ZIF268
#W = 10
#Organisms = Mus musculus
#Description = Zif268 D20A Mutant Bound to WT DNA Site
12.0	64.0	10.0	10.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
66.0	10.0	10.0	10.0
0.0	96.0	0.0	0.0
10.0	10.0	74.0	2.0
0.0	96.0	0.0	0.0

#ID = F3D14397
#Short = 1jk2_A
#Long = ZIF268
#W = 8
#Organisms = Mus musculus
#Description = Zif268 D20A mutant bound to the GCT DNA site
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
48.0	16.0	16.0	16.0
0.0	96.0	0.0	0.0
16.0	0.0	64.0	16.0
0.0	96.0	0.0	0.0

#ID = F3D14398
#Short = 1jt0_ABCD
#Long = HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN QACA 5'R
#W = 22
#Organisms = Staphylococcus aureus
#Description = Crystal structure of a cooperative QacR-DNA complex
90.0	1.0	1.0	4.0
0.0	1.0	0.0	95.0
59.0	13.0	11.0	13.0
17.0	15.0	49.0	15.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
92.0	1.0	3.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
11.0	65.0	9.0	11.0
24.0	24.0	24.0	24.0
90.0	4.0	1.0	1.0
1.0	1.0	1.0	93.0

#ID = F3D14399
#Short = 1jt0_C
#Long = HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN QACA 5'R
#W = 7
#Organisms = Staphylococcus aureus
#Description = Crystal structure of a cooperative QacR-DNA complex
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
69.0	8.0	11.0	8.0
8.0	8.0	69.0	11.0
87.0	0.0	8.0	1.0
0.0	96.0	0.0	0.0
8.0	69.0	11.0	8.0

#ID = F3D14400
#Short = 1k61_ABCD
#Long = Mating-type protein alpha-2
#W = 18
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = MATALPHA2 HOMEODOMAIN BOUND TO DNA
0.0	0.0	96.0	0.0
1.0	91.0	0.0	4.0
4.0	9.0	11.0	72.0
6.0	0.0	4.0	86.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
79.0	4.0	4.0	9.0
72.0	9.0	11.0	4.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
84.0	4.0	4.0	4.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
91.0	0.0	5.0	0.0

#ID = F3D14401
#Short = 1k61_B
#Long = Mating-type protein alpha-2
#W = 13
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = MATALPHA2 HOMEODOMAIN BOUND TO DNA
12.0	8.0	12.0	64.0
83.0	0.0	6.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
83.0	1.0	6.0	6.0
70.0	12.0	8.0	6.0
24.0	24.0	24.0	24.0
1.0	6.0	0.0	89.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
89.0	0.0	7.0	0.0

#ID = F3D14402
#Short = 1k6o_ABC
#Long = ETS-domain protein ELK-4
#W = 18
#Organisms = Homo sapiens
#Description = Crystal Structure of a Ternary SAP-1/SRF/c-fos SRE DNA Complex
86.0	0.0	1.0	9.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
17.0	17.0	3.0	59.0
24.0	24.0	24.0	24.0
7.0	0.0	1.0	88.0
0.0	96.0	0.0	0.0
0.0	86.0	0.0	10.0
73.0	5.0	17.0	1.0
7.0	0.0	1.0	88.0
94.0	0.0	1.0	1.0
24.0	24.0	24.0	24.0
1.0	3.0	0.0	92.0
71.0	9.0	9.0	7.0
5.0	0.0	90.0	1.0
4.0	1.0	9.0	82.0
96.0	0.0	0.0	0.0

#ID = F3D14403
#Short = 1k78_A
#Long = Paired Box Protein Pax5
#W = 16
#Organisms = Homo sapiens
#Description = Pax5(1-149)+Ets-1(331-440)+DNA
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
72.0	6.0	12.0	6.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
64.0	6.0	7.0	19.0
24.0	24.0	24.0	24.0
8.0	6.0	6.0	76.0
6.0	6.0	70.0	14.0
0.0	0.0	96.0	0.0

#ID = F3D14404
#Short = 1k78_EF
#Long = Paired Box Protein Pax5
#W = 19
#Organisms = Homo sapiens,Mus musculus
#Description = Pax5(1-149)+Ets-1(331-440)+DNA
0.0	83.0	1.0	12.0
12.0	57.0	15.0	12.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	51.0	25.0	14.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	8.0	76.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14405
#Short = 1k79_D
#Long = C-ets-1 protein
#W = 8
#Organisms = Mus musculus
#Description = Ets-1(331-440)+GGAA duplex
6.0	75.0	9.0	6.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
6.0	9.0	6.0	75.0
7.0	0.0	0.0	89.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
6.0	6.0	75.0	9.0

#ID = F3D14406
#Short = 1k7a_D
#Long = C-ets-1 Protein
#W = 8
#Organisms = Mus musculus
#Description = Ets-1(331-440)+GGAG duplex
9.0	73.0	7.0	7.0
24.0	24.0	24.0	24.0
9.0	7.0	7.0	73.0
9.0	73.0	7.0	7.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	9.0	73.0	7.0

#ID = F3D14407
#Short = 1kb2_AB
#Long = Vitamin D3 Receptor
#W = 14
#Organisms = Homo sapiens
#Description = Crystal Structure of VDR DNA-binding Domain Bound to Mouse Osteopontin (SPP) Response Element
12.0	2.0	4.0	78.0
24.0	24.0	24.0	24.0
2.0	93.0	0.0	1.0
77.0	0.0	19.0	0.0
0.0	96.0	0.0	0.0
2.0	86.0	4.0	4.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	2.0	2.0	88.0
4.0	12.0	61.0	19.0
53.0	9.0	22.0	12.0
94.0	2.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14408
#Short = 1kb2_B
#Long = Vitamin D3 Receptor
#W = 5
#Organisms = Homo sapiens
#Description = Crystal Structure of VDR DNA-binding Domain Bound to Mouse Osteopontin (SPP) Response Element
0.0	0.0	0.0	96.0
8.0	19.0	61.0	8.0
69.0	8.0	8.0	11.0
96.0	0.0	0.0	0.0
8.0	72.0	8.0	8.0

#ID = F3D14409
#Short = 1kb4_AB
#Long = Vitamin D3 Receptor
#W = 13
#Organisms = Homo sapiens
#Description = Crystal Structure of VDR DNA-binding Domain Bound to a Canonical Direct Repeat with Three Base Pair Spacer (DR3) Response Element
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
8.0	52.0	10.0	26.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	0.0	17.0	71.0
8.0	8.0	61.0	19.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14410
#Short = 1kb4_B
#Long = Vitamin D3 Receptor
#W = 5
#Organisms = Homo sapiens
#Description = Crystal Structure of VDR DNA-binding Domain Bound to a Canonical Direct Repeat with Three Base Pair Spacer (DR3) Response Element
8.0	8.0	8.0	72.0
11.0	8.0	69.0	8.0
61.0	10.0	8.0	17.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14411
#Short = 1kb6_AB
#Long = Vitamin D3 Receptor
#W = 15
#Organisms = Homo sapiens
#Description = Crystal Structure of VDR DNA-binding Domain Bound to Rat Osteocalcin (OC) Response Element
14.0	5.0	5.0	72.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
5.0	63.0	5.0	23.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	22.0	19.0	46.0
24.0	24.0	24.0	24.0
49.0	7.0	21.0	19.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	92.0	1.0	3.0

#ID = F3D14412
#Short = 1kb6_B
#Long = Vitamin D3 Receptor
#W = 6
#Organisms = Homo sapiens
#Description = Crystal Structure of VDR DNA-binding Domain Bound to Rat Osteocalcin (OC) Response Element
0.0	0.0	0.0	96.0
2.0	9.0	76.0	9.0
11.0	9.0	19.0	57.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
9.0	11.0	19.0	57.0

#ID = F3D14413
#Short = 1ku7_A
#Long = sigma factor sigA
#W = 7
#Organisms = Thermus aquaticus
#Description = Crystal Structure of Thermus aquatics RNA Polymerase SigmaA Subunit Region 4 Bound to-35 Element DNA
13.0	6.0	9.0	68.0
0.0	0.0	96.0	0.0
6.0	9.0	6.0	75.0
0.0	96.0	0.0	0.0
68.0	9.0	13.0	6.0
96.0	0.0	0.0	0.0
9.0	6.0	75.0	6.0

#ID = F3D14414
#Short = 1l1m_AB
#Long = Lactose operon repressor
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1
3.0	5.0	3.0	85.0
7.0	7.0	8.0	74.0
10.0	12.0	64.0	10.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
3.0	90.0	0.0	3.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
8.0	74.0	7.0	7.0
74.0	7.0	8.0	7.0
85.0	5.0	3.0	3.0

#ID = F3D14415
#Short = 1l1m_B
#Long = Lactose operon repressor
#W = 10
#Organisms = Escherichia coli (strain K12)
#Description = SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1
0.0	0.0	0.0	96.0
9.0	9.0	11.0	67.0
9.0	9.0	67.0	11.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
9.0	69.0	9.0	9.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14416
#Short = 1l3l_A
#Long = Transcriptional activator protein traR
#W = 6
#Organisms = Agrobacterium tumefaciens,Rhizobium radiobacter (Agrobacterium tumefaciens)
#Description = Crystal structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA
19.0	11.0	9.0	57.0
9.0	11.0	57.0	19.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
76.0	0.0	9.0	11.0

#ID = F3D14417
#Short = 1l3l_AC
#Long = Transcriptional activator protein traR
#W = 15
#Organisms = Agrobacterium tumefaciens,Rhizobium radiobacter (Agrobacterium tumefaciens)
#Description = Crystal structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA
10.0	5.0	16.0	65.0
5.0	10.0	49.0	32.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
81.0	0.0	10.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	0.0	91.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
22.0	64.0	0.0	10.0

#ID = F3D14418
#Short = 1l3l_BD
#Long = Transcriptional activator protein traR
#W = 15
#Organisms = Agrobacterium tumefaciens,Rhizobium radiobacter (Agrobacterium tumefaciens)
#Description = Crystal structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA
5.0	7.0	11.0	73.0
5.0	0.0	63.0	28.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
79.0	5.0	7.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	5.0	5.0	73.0
6.0	0.0	90.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
1.0	84.0	0.0	11.0

#ID = F3D14419
#Short = 1lat_A
#Long = GLUCOCORTICOID RECEPTOR
#W = 6
#Organisms = Rattus norvegicus
#Description = GLUCOCORTICOID RECEPTOR MUTANT/DNA COMPLEX
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
12.0	12.0	24.0	48.0
0.0	96.0	0.0	0.0
12.0	48.0	12.0	24.0

#ID = F3D14420
#Short = 1lat_AB
#Long = GLUCOCORTICOID RECEPTOR
#W = 11
#Organisms = Rattus norvegicus
#Description = GLUCOCORTICOID RECEPTOR MUTANT/DNA COMPLEX
0.0	0.0	96.0	0.0
76.0	0.0	9.0	11.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
9.0	9.0	21.0	57.0
0.0	96.0	0.0	0.0
11.0	67.0	9.0	9.0

#ID = F3D14421
#Short = 1lb2_ABE
#Long = CATABOLITE GENE ACTIVATOR PROTEIN
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Structure of the E. coli alpha C-terminal domain of RNA polymerase in complex with CAP and DNA
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
92.0	4.0	0.0	0.0
0.0	96.0	0.0	0.0
82.0	8.0	3.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	22.0	9.0	52.0
54.0	13.0	16.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
59.0	3.0	5.0	29.0
93.0	3.0	0.0	0.0

#ID = F3D14422
#Short = 1lcc_A
#Long = Lac Repressor
#W = 9
#Organisms = Escherichia coli (strain K12)
#Description = STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE-PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
5.0	73.0	7.0	11.0
5.0	5.0	79.0	7.0
5.0	81.0	5.0	5.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
90.0	0.0	5.0	1.0
0.0	96.0	0.0	0.0
73.0	11.0	7.0	5.0
84.0	5.0	7.0	0.0

#ID = F3D14423
#Short = 1lcd_A
#Long = Lac Repressor
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE-PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
9.0	69.0	9.0	9.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
9.0	67.0	11.0	9.0
24.0	24.0	24.0	24.0
67.0	9.0	11.0	9.0

#ID = F3D14424
#Short = 1le5_AB
#Long = Nuclear factor NF-kappa-B p65 subunit
#W = 11
#Organisms = Mus musculus
#Description = Crystal structure of a NF-kB heterodimer bound to an IFNb-kB
7.0	5.0	5.0	79.0
5.0	5.0	81.0	5.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
81.0	5.0	5.0	5.0
5.0	7.0	5.0	79.0
0.0	0.0	0.0	96.0
2.0	5.0	5.0	84.0
0.0	96.0	0.0	0.0
5.0	84.0	0.0	7.0
0.0	96.0	0.0	0.0

#ID = F3D14425
#Short = 1le5_E
#Long = Nuclear factor NF-kappa-B p65 subunit
#W = 4
#Organisms = Mus musculus
#Description = Crystal structure of a NF-kB heterodimer bound to an IFNb-kB
0.0	0.0	96.0	0.0
1.0	1.0	93.0	1.0
71.0	10.0	5.0	10.0
40.0	19.0	17.0	20.0

#ID = F3D14426
#Short = 1le5_EF
#Long = Nuclear factor NF-kappa-B p65 subunit
#W = 10
#Organisms = Mus musculus
#Description = Crystal structure of a NF-kB heterodimer bound to an IFNb-kB
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
54.0	13.0	16.0	13.0
24.0	24.0	24.0	24.0
13.0	13.0	16.0	54.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14427
#Short = 1le8_A
#Long = MATING-TYPE PROTEIN A-1
#W = 8
#Organisms = Saccharomyces cerevisiae
#Description = Crystal Structure of the MATa1/MATalpha2-3A Heterodimer Bound to DNA Complex
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
7.0	7.0	73.0	9.0
7.0	9.0	7.0	73.0
73.0	9.0	7.0	7.0
73.0	9.0	7.0	7.0

#ID = F3D14428
#Short = 1le8_AB
#Long = MATING-TYPE PROTEIN A-1
#W = 16
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Crystal Structure of the MATa1/MATalpha2-3A Heterodimer Bound to DNA Complex
6.0	4.0	4.0	82.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
4.0	4.0	82.0	6.0
13.0	4.0	4.0	75.0
73.0	10.0	4.0	9.0
82.0	4.0	6.0	4.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
6.0	82.0	4.0	4.0

#ID = F3D14429
#Short = 1le8_B
#Long = Mating-type protein alpha-2
#W = 6
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Crystal Structure of the MATa1/MATalpha2-3A Heterodimer Bound to DNA Complex
10.0	0.0	8.0	78.0
17.0	26.0	8.0	45.0
24.0	24.0	24.0	24.0
0.0	0.0	9.0	87.0
87.0	8.0	0.0	1.0
0.0	96.0	0.0	0.0

#ID = F3D14430
#Short = 1le9_AB
#Long = NUCLEAR FACTOR NF-KAPPA-B P65 SUBUNIT
#W = 10
#Organisms = Mus musculus
#Description = Crystal structure of a NF-kB heterodimer bound to the Ig/HIV-kB siti
51.0	12.0	12.0	21.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
57.0	12.0	15.0	12.0
57.0	8.0	19.0	12.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14431
#Short = 1le9_EF
#Long = NUCLEAR FACTOR NF-KAPPA-B P65 SUBUNIT
#W = 7
#Organisms = Mus musculus
#Description = Crystal structure of a NF-kB heterodimer bound to the Ig/HIV-kB siti
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
69.0	9.0	9.0	9.0
9.0	11.0	67.0	9.0
9.0	9.0	11.0	67.0
0.0	96.0	0.0	0.0

#ID = F3D14432
#Short = 1lfu_P
#Long = homeobox protein PBX1
#W = 6
#Organisms = Mus musculus
#Description = NMR Solution Stucture of the Extended PBX Homeodomain Bound to DNA
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
13.0	13.0	16.0	54.0
13.0	13.0	13.0	57.0

#ID = F3D14433
#Short = 1lli_AB
#Long = PROTEIN (LAMBDA REPRESSOR)
#W = 17
#Organisms = Enterobacteria phage lambda
#Description = THE CRYSTAL STRUCTURE OF A MUTANT PROTEIN WITH ALTERED BUT IMPROVED HYDROPHOBIC CORE PACKING
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
66.0	10.0	16.0	4.0
52.0	44.0	0.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
6.0	48.0	20.0	22.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
8.0	16.0	12.0	60.0
0.0	0.0	96.0	0.0
78.0	4.0	8.0	6.0
0.0	0.0	0.0	96.0
86.0	2.0	4.0	4.0

#ID = F3D14434
#Short = 1lli_B
#Long = PROTEIN (LAMBDA REPRESSOR)
#W = 9
#Organisms = Enterobacteria phage lambda
#Description = THE CRYSTAL STRUCTURE OF A MUTANT PROTEIN WITH ALTERED BUT IMPROVED HYDROPHOBIC CORE PACKING
0.0	0.0	96.0	0.0
8.0	48.0	27.0	13.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
6.0	13.0	9.0	68.0
0.0	0.0	96.0	0.0
54.0	6.0	23.0	13.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14435
#Short = 1llm_CD
#Long = chimera of Zif23-GCN4
#W = 12
#Organisms = Saccharomyces cerevisiae (Mus musculus)
#Description = Crystal Structure of a Zif23-GCN4 Chimera Bound to DNA
13.0	54.0	13.0	16.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
13.0	13.0	16.0	54.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14436
#Short = 1llm_D
#Long = chimera of Zif23-GCN4
#W = 7
#Organisms = Saccharomyces cerevisiae (Mus musculus)
#Description = Crystal Structure of a Zif23-GCN4 Chimera Bound to DNA
7.0	9.0	72.0	8.0
3.0	90.0	1.0	2.0
0.0	0.0	96.0	0.0
1.0	1.0	37.0	57.0
1.0	2.0	88.0	5.0
2.0	2.0	90.0	2.0
8.0	8.0	73.0	7.0

#ID = F3D14437
#Short = 1lmb_34
#Long = PROTEIN (LAMBDA REPRESSOR)
#W = 17
#Organisms = Enterobacteria phage lambda
#Description = REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR-OPERATOR COMPLEX
5.0	6.0	5.0	80.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
1.0	90.0	0.0	5.0
24.0	24.0	24.0	24.0
86.0	10.0	0.0	0.0
5.0	5.0	5.0	81.0
24.0	24.0	24.0	24.0
0.0	0.0	90.0	6.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
10.0	5.0	11.0	70.0
0.0	0.0	96.0	0.0
70.0	10.0	6.0	10.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14438
#Short = 1lmb_4
#Long = PROTEIN (LAMBDA REPRESSOR)
#W = 9
#Organisms = Enterobacteria phage lambda
#Description = REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR-OPERATOR COMPLEX
0.0	0.0	86.0	10.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
19.0	20.0	9.0	48.0
0.0	0.0	96.0	0.0
57.0	19.0	19.0	1.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14439
#Short = 1lo1_A
#Long = Steroid hormone receptor ERR2
#W = 10
#Organisms = Homo sapiens
#Description = ESTROGEN RELATED RECEPTOR 2 DNA BINDING DOMAIN IN COMPLEX WITH DNA
13.0	13.0	13.0	57.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
13.0	16.0	54.0	13.0

#ID = F3D14440
#Short = 1lq1_AB
#Long = Stage 0 sporulation protein A
#W = 12
#Organisms = Bacillus subtilis,strain 168
#Description = DNA Complexed Structure of the Key Transcription Factor Initiating Development in Sporulation Bacteria
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
67.0	9.0	9.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
67.0	9.0	9.0	11.0
0.0	96.0	0.0	0.0
67.0	9.0	11.0	9.0

#ID = F3D14441
#Short = 1lq1_D
#Long = Stage 0 sporulation protein A
#W = 5
#Organisms = Bacillus subtilis,strain 168
#Description = DNA Complexed Structure of the Key Transcription Factor Initiating Development in Sporulation Bacteria
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
54.0	13.0	16.0	13.0
0.0	96.0	0.0	0.0
54.0	13.0	16.0	13.0

#ID = F3D14442
#Short = 1mdm_AB
#Long = PAIRED BOX PROTEIN PAX-5
#W = 19
#Organisms = Homo sapiens,Mus musculus
#Description = INHIBITED FRAGMENT OF ETS-1 AND PAIRED DOMAIN OF PAX5 BOUND TO DNA
0.0	91.0	0.0	5.0
10.0	74.0	5.0	7.0
86.0	0.0	5.0	5.0
24.0	24.0	24.0	24.0
10.0	12.0	64.0	10.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	80.0	11.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	5.0	5.0	81.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14443
#Short = 1mdy_AB
#Long = PROTEIN (MYOD BHLH DOMAIN)
#W = 6
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF MYOD BHLH DOMAIN BOUND TO DNA: PERSPECTIVES ON DNA RECOGNITION AND IMPLICATIONS FOR TRANSCRIPTIONAL ACTIVATION
0.0	96.0	0.0	0.0
54.0	13.0	13.0	16.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	13.0	13.0	57.0
0.0	0.0	96.0	0.0

#ID = F3D14444
#Short = 1mey_C
#Long = CONSENSUS ZINC FINGER
#W = 10
#Description = CRYSTAL STRUCTURE OF A DESIGNED ZINC FINGER PROTEIN BOUND TO DNA
1.0	0.0	95.0	0.0
36.0	4.0	35.0	21.0
5.0	6.0	80.0	5.0
3.0	3.0	88.0	2.0
2.0	93.0	0.0	1.0
92.0	1.0	2.0	1.0
0.0	0.0	96.0	0.0
95.0	1.0	0.0	0.0
83.0	4.0	6.0	3.0
6.0	56.0	7.0	27.0

#ID = F3D14445
#Short = 1mey_CF
#Long = CONSENSUS ZINC FINGER
#W = 23
#Description = CRYSTAL STRUCTURE OF A DESIGNED ZINC FINGER PROTEIN BOUND TO DNA
0.0	0.0	96.0	0.0
4.0	12.0	76.0	4.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	91.0	0.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	7.0	9.0	76.0
4.0	7.0	81.0	4.0
69.0	4.0	19.0	4.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	92.0	4.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	81.0	4.0	11.0

#ID = F3D14446
#Short = 1mhd_AB
#Long = SMAD3
#W = 10
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF A SMAD MH1 DOMAIN BOUND TO DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
13.0	16.0	11.0	56.0
2.0	73.0	16.0	5.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
1.0	0.0	11.0	84.0
58.0	16.0	11.0	11.0
0.0	96.0	0.0	0.0
5.0	7.0	0.0	84.0

#ID = F3D14447
#Short = 1mj2_ABCD
#Long = PROTEIN (METHIONINE REPRESSOR)
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO A CONSENSUS OPERATOR SEQUENCE
92.0	0.0	3.0	1.0
0.0	0.0	96.0	0.0
74.0	7.0	7.0	8.0
1.0	90.0	0.0	5.0
1.0	1.0	93.0	1.0
0.0	1.0	0.0	95.0
0.0	96.0	0.0	0.0
0.0	51.0	1.0	44.0
81.0	7.0	1.0	7.0
0.0	0.0	96.0	0.0
88.0	0.0	8.0	0.0
24.0	24.0	24.0	24.0
1.0	3.0	92.0	0.0
76.0	6.0	5.0	9.0
0.0	96.0	0.0	0.0
3.0	48.0	1.0	44.0

#ID = F3D14448
#Short = 1mj2_B
#Long = PROTEIN (METHIONINE REPRESSOR)
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO A CONSENSUS OPERATOR SEQUENCE
44.0	9.0	29.0	14.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
22.0	14.0	51.0	9.0
1.0	22.0	0.0	73.0

#ID = F3D14449
#Short = 1mjm_AB
#Long = METHIONINE REPRESSOR
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = METHIONINE APOREPRESSOR MUTANT (Q44K) COMPLEXED TO HALF OF THE CONSENSUS OPERATOR SEQUENCE
6.0	6.0	78.0	6.0
0.0	0.0	96.0	0.0
72.0	6.0	12.0	6.0
6.0	78.0	6.0	6.0
12.0	6.0	72.0	6.0
6.0	6.0	6.0	78.0
0.0	96.0	0.0	0.0

#ID = F3D14450
#Short = 1mjm_B
#Long = METHIONINE REPRESSOR
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = METHIONINE APOREPRESSOR MUTANT (Q44K) COMPLEXED TO HALF OF THE CONSENSUS OPERATOR SEQUENCE
19.0	8.0	61.0	8.0
96.0	0.0	0.0	0.0
10.0	61.0	8.0	17.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
8.0	8.0	11.0	69.0

#ID = F3D14451
#Short = 1mjo_ABCD
#Long = METHIONINE REPRESSOR
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = METHIONINE HOLOREPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO THE MINIMAL MET CONSENSUS OPERATOR WITH THE CENTRAL TA STEP MUTATED TO AT
21.0	0.0	74.0	1.0
0.0	0.0	96.0	0.0
94.0	0.0	2.0	0.0
1.0	83.0	1.0	11.0
13.0	1.0	79.0	3.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
53.0	13.0	19.0	11.0
0.0	1.0	3.0	92.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
1.0	94.0	0.0	1.0
3.0	1.0	91.0	1.0
63.0	0.0	0.0	33.0
0.0	96.0	0.0	0.0
21.0	0.0	1.0	74.0

#ID = F3D14452
#Short = 1mjo_D
#Long = METHIONINE REPRESSOR
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = METHIONINE HOLOREPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO THE MINIMAL MET CONSENSUS OPERATOR WITH THE CENTRAL TA STEP MUTATED TO AT
9.0	11.0	67.0	9.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	69.0	9.0	9.0
9.0	9.0	9.0	69.0

#ID = F3D14453
#Short = 1mjp_AB
#Long = METHIONINE REPRESSOR
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = METHIONINE APOREPRESSOR MUTANT (Q44K) COMPLEXED TO THE MINIMAL MET CONSENSUS OPERATOR
36.0	6.0	48.0	6.0
18.0	12.0	66.0	0.0
84.0	6.0	6.0	0.0
0.0	96.0	0.0	0.0
30.0	18.0	42.0	6.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0

#ID = F3D14454
#Short = 1mjq_A
#Long = METHIONINE REPRESSOR
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO AN ALTERED MET CONSENSUS OPERATOR SEQUENCE
67.0	9.0	11.0	9.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
69.0	9.0	9.0	9.0
20.0	9.0	0.0	67.0

#ID = F3D14455
#Short = 1mjq_ABCD
#Long = METHIONINE REPRESSOR
#W = 15
#Organisms = Escherichia coli (strain K12)
#Description = METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO AN ALTERED MET CONSENSUS OPERATOR SEQUENCE
82.0	6.0	2.0	6.0
0.0	0.0	96.0	0.0
26.0	6.0	2.0	62.0
0.0	3.0	0.0	93.0
64.0	11.0	4.0	17.0
0.0	4.0	1.0	91.0
0.0	96.0	0.0	0.0
1.0	51.0	2.0	42.0
84.0	2.0	4.0	6.0
0.0	0.0	96.0	0.0
89.0	0.0	6.0	1.0
8.0	13.0	6.0	69.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0

#ID = F3D14456
#Short = 1mjq_GHIJ
#Long = METHIONINE REPRESSOR
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO AN ALTERED MET CONSENSUS OPERATOR SEQUENCE
73.0	0.0	6.0	17.0
0.0	0.0	96.0	0.0
17.0	2.0	0.0	77.0
0.0	0.0	0.0	96.0
41.0	11.0	24.0	20.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
71.0	2.0	0.0	23.0
73.0	1.0	20.0	2.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
11.0	11.0	11.0	63.0
91.0	0.0	5.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14457
#Short = 1mnm_A
#Long = PROTEIN (MCM1 TRANSCRIPTIONAL REGULATOR)
#W = 4
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = YEAST MATALPHA2/MCM1/DNA TERNARY TRANSCRIPTION COMPLEX CRYSTAL STRUCTURE
0.0	0.0	0.0	96.0
54.0	16.0	13.0	13.0
0.0	0.0	96.0	0.0
13.0	16.0	54.0	13.0

#ID = F3D14458
#Short = 1n6j_AB
#Long = Myocyte-specific enhancer factor 2B
#W = 9
#Organisms = Homo sapiens
#Description = Structural basis of sequence-specific recruitment of histone deacetylases by Myocyte Enhancer Factor-2
7.0	8.0	2.0	79.0
57.0	12.0	15.0	12.0
27.0	22.0	19.0	28.0
27.0	21.0	21.0	27.0
25.0	22.0	23.0	26.0
33.0	22.0	24.0	17.0
10.0	15.0	9.0	62.0
68.0	6.0	12.0	10.0
14.0	14.0	54.0	14.0

#ID = F3D14459
#Short = 1nfk_A
#Long = PROTEIN (NUCLEAR FACTOR KAPPA-B (NF-KB))
#W = 4
#Organisms = Mus musculus
#Description = STRUCTURE OF THE NUCLEAR FACTOR KAPPA-B (NF-KB) P50 HOMODIMER
0.0	0.0	96.0	0.0
0.0	1.0	95.0	0.0
17.0	4.0	72.0	3.0
55.0	32.0	3.0	6.0

#ID = F3D14460
#Short = 1nfk_AB
#Long = PROTEIN (NUCLEAR FACTOR KAPPA-B (NF-KB))
#W = 10
#Organisms = Mus musculus
#Description = STRUCTURE OF THE NUCLEAR FACTOR KAPPA-B (NF-KB) P50 HOMODIMER
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
88.0	8.0	0.0	0.0
56.0	8.0	16.0	16.0
16.0	0.0	16.0	64.0
8.0	8.0	0.0	80.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14461
#Short = 1ngm_E
#Long = Transcription initiation factor TFIID
#W = 7
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Crystal structure of a yeast Brf1-TBP-DNA ternary complex
0.0	0.0	0.0	96.0
16.0	13.0	13.0	54.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
54.0	16.0	13.0	13.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14462
#Short = 1nh2_AC
#Long = Transcription initiation factor TFIID
#W = 8
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Crystal structure of a yeast TFIIA/TBP/DNA complex
13.0	13.0	57.0	13.0
0.0	0.0	0.0	96.0
16.0	13.0	13.0	54.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14463
#Short = 1nk2_P
#Long = HOMEOBOX PROTEIN VND
#W = 5
#Organisms = Drosophila melanogaster
#Description = VND/NK-2 HOMEODOMAIN/DNA COMPLEX, NMR, 20 STRUCTURES
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
13.0	54.0	13.0	16.0
54.0	13.0	13.0	16.0
96.0	0.0	0.0	0.0

#ID = F3D14464
#Short = 1nkp_A
#Long = Myc proto-oncogene protein
#W = 5
#Organisms = Homo sapiens
#Description = Crystal structure of Myc-Max recognizing DNA
13.0	13.0	54.0	16.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
16.0	13.0	54.0	13.0

#ID = F3D14465
#Short = 1nkp_AB
#Long = Myc proto-oncogene protein
#W = 9
#Organisms = Homo sapiens
#Description = Crystal structure of Myc-Max recognizing DNA
9.0	11.0	67.0	9.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
11.0	67.0	9.0	9.0
9.0	9.0	11.0	67.0

#ID = F3D14466
#Short = 1nkp_DE
#Long = Myc proto-oncogene protein
#W = 7
#Organisms = Homo sapiens
#Description = Crystal structure of Myc-Max recognizing DNA
19.0	20.0	38.0	19.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	20.0	0.0	76.0
0.0	0.0	96.0	0.0

#ID = F3D14467
#Short = 1nkp_E
#Long = Max protein
#W = 5
#Organisms = Homo sapiens
#Description = Crystal structure of Myc-Max recognizing DNA
13.0	16.0	54.0	13.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
13.0	13.0	54.0	16.0

#ID = F3D14468
#Short = 1nlw_AB
#Long = MAD PROTEIN
#W = 9
#Organisms = Homo sapiens
#Description = Crystal structure of Mad-Max recognizing DNA
7.0	7.0	75.0	7.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	7.0	73.0	9.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
7.0	73.0	7.0	9.0
75.0	7.0	7.0	7.0

#ID = F3D14469
#Short = 1nvp_AC
#Long = TATA box binding protein
#W = 12
#Organisms = Homo sapiens
#Description = HUMAN TFIIA/TBP/DNA COMPLEX
3.0	75.0	15.0	3.0
0.0	0.0	0.0	96.0
3.0	7.0	10.0	76.0
3.0	6.0	3.0	84.0
0.0	0.0	0.0	96.0
84.0	3.0	6.0	3.0
0.0	0.0	0.0	96.0
84.0	3.0	3.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	84.0	6.0	3.0
10.0	80.0	3.0	3.0

#ID = F3D14470
#Short = 1nwq_AC
#Long = CCAAT/enhancer binding protein alpha
#W = 8
#Organisms = Rattus norvegicus
#Description = CRYSTAL STRUCTURE OF C/EBPALPHA-DNA COMPLEX
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	9.0	86.0	1.0
9.0	67.0	9.0	11.0
76.0	11.0	0.0	9.0
67.0	9.0	11.0	9.0

#ID = F3D14471
#Short = 1nwq_C
#Long = CCAAT/enhancer binding protein alpha
#W = 4
#Organisms = Rattus norvegicus
#Description = CRYSTAL STRUCTURE OF C/EBPALPHA-DNA COMPLEX
7.0	6.0	6.0	77.0
3.0	10.0	0.0	83.0
5.0	5.0	77.0	9.0
5.0	80.0	7.0	4.0

#ID = F3D14472
#Short = 1o3q_A
#Long = CATABOLITE GENE ACTIVATOR PROTEIN
#W = 5
#Organisms = Escherichia coli (strain K12)
#Description = PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
0.0	0.0	0.0	96.0
11.0	67.0	9.0	9.0
67.0	9.0	9.0	11.0
0.0	96.0	0.0	0.0
67.0	9.0	9.0	11.0

#ID = F3D14473
#Short = 1o3r_A
#Long = CATABOLITE GENE ACTIVATOR PROTEIN
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
9.0	9.0	69.0	9.0
0.0	96.0	0.0	0.0
67.0	9.0	9.0	11.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
9.0	11.0	9.0	67.0

#ID = F3D14474
#Short = 1o3t_B
#Long = CATABOLITE GENE ACTIVATOR PROTEIN
#W = 5
#Organisms = Escherichia coli (strain K12)
#Description = PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
16.0	54.0	13.0	13.0
0.0	0.0	96.0	0.0
54.0	13.0	13.0	16.0

#ID = F3D14475
#Short = 1o4x_AB
#Long = transcription factor Oct-1
#W = 16
#Organisms = Homo sapiens
#Description = TERNARY COMPLEX OF THE DNA BINDING DOMAINS OF THE OCT1 AND SOX2 TRANSCRIPTION FACTORS WITH A 19MER OLIGONUCLEOTIDE FROM THE HOXB1 REGULATORY ELEMENT
0.0	96.0	0.0	0.0
89.0	1.0	6.0	0.0
0.0	0.0	0.0	96.0
9.0	6.0	6.0	75.0
24.0	24.0	24.0	24.0
6.0	6.0	78.0	6.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
9.0	6.0	6.0	75.0
6.0	9.0	75.0	6.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14476
#Short = 1o4x_B
#Long = Transcription factor SOX-2
#W = 6
#Organisms = Homo sapiens
#Description = TERNARY COMPLEX OF THE DNA BINDING DOMAINS OF THE OCT1 AND SOX2 TRANSCRIPTION FACTORS WITH A 19MER OLIGONUCLEOTIDE FROM THE HOXB1 REGULATORY ELEMENT
55.0	21.0	10.0	10.0
10.0	66.0	10.0	10.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	11.0	85.0	0.0

#ID = F3D14477
#Short = 1oct_C
#Long = PROTEIN (OCT-1 POU DOMAIN)
#W = 9
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF THE OCT-1 POU DOMAIN BOUND TO AN OCTAMER SITE: DNA RECOGNITION WITH TETHERED DNA-BINDING MODULES
14.0	4.0	9.0	69.0
96.0	0.0	0.0	0.0
0.0	14.0	4.0	78.0
5.0	0.0	91.0	0.0
0.0	96.0	0.0	0.0
91.0	0.0	1.0	4.0
55.0	9.0	4.0	28.0
28.0	60.0	4.0	4.0
0.0	0.0	0.0	96.0

#ID = F3D14478
#Short = 1odh_A
#Long = MGCM1
#W = 5
#Organisms = Mus musculus
#Description = STRUCTURE OF THE GCM DOMAIN BOUND TO DNA
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
13.0	13.0	54.0	16.0
13.0	57.0	13.0	13.0

#ID = F3D14479
#Short = 1osl_AB
#Long = Lactose operon repressor
#W = 14
#Organisms = Escherichia coli (strain K12)
#Description = Solution structure of a dimeric lactose DNA-binding domain complexed to a nonspecific DNA sequence
84.0	3.0	3.0	6.0
3.0	6.0	3.0	84.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	3.0	93.0	0.0
84.0	3.0	6.0	3.0
6.0	3.0	3.0	84.0
87.0	3.0	3.0	3.0
3.0	6.0	3.0	84.0
6.0	84.0	3.0	3.0
1.0	3.0	0.0	92.0
0.0	1.0	3.0	92.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14480
#Short = 1osl_B
#Long = Lactose operon repressor
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = Solution structure of a dimeric lactose DNA-binding domain complexed to a nonspecific DNA sequence
83.0	4.0	5.0	4.0
4.0	4.0	5.0	83.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
56.0	4.0	16.0	20.0
24.0	24.0	24.0	24.0
45.0	20.0	19.0	12.0

#ID = F3D14481
#Short = 1ozj_AB
#Long = SMAD 3
#W = 9
#Organisms = Homo sapiens
#Description = Crystal structure of Smad3-MH1 bound to DNA at 2.4 A resolution
0.0	10.0	12.0	74.0
0.0	0.0	96.0	0.0
12.0	10.0	10.0	64.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
64.0	10.0	10.0	12.0
0.0	96.0	0.0	0.0

#ID = F3D14482
#Short = 1p47_AB
#Long = Early growth response protein 1
#W = 20
#Organisms = Mus musculus
#Description = Crystal Structure of tandem Zif268 molecules complexed to DNA
84.0	4.0	4.0	4.0
0.0	96.0	0.0	0.0
4.0	4.0	84.0	4.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
86.0	6.0	0.0	4.0
0.0	96.0	0.0	0.0
4.0	6.0	82.0	4.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
4.0	4.0	88.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
84.0	4.0	4.0	4.0
0.0	96.0	0.0	0.0
4.0	1.0	91.0	0.0
0.0	96.0	0.0	0.0
4.0	82.0	4.0	6.0

#ID = F3D14483
#Short = 1par_ABCD
#Long = PROTEIN (ARC REPRESSOR)
#W = 20
#Organisms = Enterobacteria phage P22
#Description = DNA RECOGNITION BY BETA-SHEETS IN THE ARC REPRESSOR-OPERATOR CRYSTAL STRUCTURE
81.0	3.0	9.0	3.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
12.0	3.0	4.0	77.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
92.0	0.0	4.0	0.0
61.0	11.0	6.0	18.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	4.0	3.0	86.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
9.0	68.0	9.0	10.0
6.0	68.0	3.0	19.0
96.0	0.0	0.0	0.0

#ID = F3D14484
#Short = 1par_B
#Long = PROTEIN (ARC REPRESSOR)
#W = 5
#Organisms = Enterobacteria phage P22
#Description = DNA RECOGNITION BY BETA-SHEETS IN THE ARC REPRESSOR-OPERATOR CRYSTAL STRUCTURE
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
13.0	16.0	13.0	54.0
54.0	13.0	16.0	13.0

#ID = F3D14485
#Short = 1pdn_C
#Long = PROTEIN (PRD PAIRED)
#W = 7
#Organisms = Drosophila melanogaster
#Description = CRYSTAL STRUCTURE OF A PAIRED DOMAIN-DNA COMPLEX AT 2.5 ANGSTROMS RESOLUTION REVEALS STRUCTURAL BASIS FOR PAX DEVELOPMENTAL MUTATIONS
0.0	96.0	0.0	0.0
8.0	0.0	87.0	1.0
11.0	8.0	8.0	69.0
24.0	24.0	24.0	24.0
72.0	8.0	8.0	8.0
24.0	24.0	24.0	24.0
8.0	8.0	69.0	11.0

#ID = F3D14486
#Short = 1per_L
#Long = PROTEIN (434 REPRESSOR)
#W = 5
#Organisms = Enterobacteria phage lambda,Phage 434
#Description = THE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON-CONSENSUS HALF-SITES
0.0	0.0	0.0	96.0
13.0	15.0	0.0	68.0
0.0	0.0	96.0	0.0
0.0	13.0	1.0	82.0
54.0	13.0	16.0	13.0

#ID = F3D14487
#Short = 1per_LR
#Long = PROTEIN (434 REPRESSOR)
#W = 16
#Organisms = Enterobacteria phage lambda,Phage 434
#Description = THE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON-CONSENSUS HALF-SITES
16.0	15.0	13.0	52.0
86.0	3.0	3.0	4.0
4.0	81.0	4.0	7.0
58.0	14.0	14.0	10.0
21.0	25.0	28.0	22.0
23.0	24.0	25.0	24.0
20.0	21.0	27.0	28.0
22.0	21.0	22.0	31.0
24.0	21.0	24.0	27.0
24.0	21.0	23.0	28.0
20.0	33.0	21.0	22.0
9.0	8.0	9.0	70.0
15.0	21.0	3.0	57.0
2.0	2.0	90.0	2.0
4.0	19.0	3.0	70.0
52.0	13.0	16.0	15.0

#ID = F3D14488
#Short = 1pnr_A
#Long = PROTEIN (PURINE REPRESSOR)
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = PURINE REPRESSOR-HYPOXANTHINE-PURF-OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
54.0	13.0	16.0	13.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
13.0	13.0	57.0	13.0

#ID = F3D14489
#Short = 1pue_E
#Long = PROTEIN (TRANSCRIPTION FACTOR PU.1 (TF PU.1))
#W = 5
#Organisms = Mus musculus
#Description = PU.1 ETS DOMAIN-DNA COMPLEX
0.0	12.0	72.0	12.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
84.0	0.0	12.0	0.0
48.0	24.0	12.0	12.0

#ID = F3D14490
#Short = 1puf_A
#Long = Homeobox protein Hox-A9
#W = 7
#Organisms = Mus musculus
#Description = Crystal Structure of HoxA9 and Pbx1 homeodomains bound to DNA
0.0	9.0	11.0	76.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
57.0	19.0	9.0	11.0
19.0	57.0	9.0	11.0

#ID = F3D14491
#Short = 1puf_AB
#Long = Homeobox protein Hox-A9
#W = 12
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal Structure of HoxA9 and Pbx1 homeodomains bound to DNA
75.0	5.0	10.0	6.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
11.0	5.0	0.0	80.0
25.0	5.0	0.0	66.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
55.0	10.0	11.0	20.0
10.0	80.0	5.0	1.0

#ID = F3D14492
#Short = 1puf_B
#Long = Pre-B-cell leukemia transcription factor-1
#W = 6
#Organisms = Homo sapiens
#Description = Crystal Structure of HoxA9 and Pbx1 homeodomains bound to DNA
57.0	9.0	19.0	11.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	9.0	9.0	78.0
57.0	21.0	9.0	9.0

#ID = F3D14493
#Short = 1pzu_B
#Long = Nuclear factor of activated T-cells, cytoplasmic 2
#W = 5
#Organisms = Homo sapiens
#Description = An asymmetric NFAT1-RHR homodimer on a pseudo-palindromic, Kappa-B site
13.0	13.0	13.0	57.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
54.0	13.0	16.0	13.0

#ID = F3D14494
#Short = 1pzu_BHIM
#Long = Nuclear factor of activated T-cells, cytoplasmic 2
#W = 27
#Organisms = Homo sapiens
#Description = An asymmetric NFAT1-RHR homodimer on a pseudo-palindromic, Kappa-B site
6.0	4.0	4.0	82.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
4.0	4.0	6.0	82.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	4.0	4.0	82.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
78.0	10.0	4.0	4.0
24.0	24.0	24.0	24.0
0.0	4.0	4.0	88.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	4.0	4.0	82.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
78.0	10.0	4.0	4.0

#ID = F3D14495
#Short = 1qn3_B
#Long = TRANSCRIPTION INITIATION FACTOR TFIID-1
#W = 8
#Organisms = Arabidopsis thaliana
#Description = CRYSTAL STRUCTURE OF THE C(-25) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
7.0	66.0	14.0	9.0
1.0	0.0	88.0	7.0
9.0	7.0	7.0	73.0
1.0	0.0	7.0	88.0
0.0	0.0	0.0	96.0
89.0	0.0	7.0	0.0
0.0	0.0	0.0	96.0
81.0	0.0	8.0	7.0

#ID = F3D14496
#Short = 1qn4_B
#Long = TRANSCRIPTION INITIATION FACTOR TFIID-1
#W = 8
#Organisms = Arabidopsis thaliana
#Description = CRYSTAL STRUCTURE OF THE T(-24) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
54.0	13.0	16.0	13.0
0.0	0.0	0.0	96.0
16.0	13.0	13.0	54.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14497
#Short = 1qn6_B
#Long = TRANSCRIPTION INITIATION FACTOR TFIID-1
#W = 8
#Organisms = Arabidopsis thaliana
#Description = CRYSTAL STRUCTURE OF THE T(-26) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
7.0	73.0	9.0	7.0
0.0	0.0	0.0	96.0
81.0	1.0	7.0	7.0
0.0	7.0	7.0	82.0
0.0	0.0	0.0	96.0
89.0	0.0	7.0	0.0
0.0	7.0	1.0	88.0
73.0	9.0	7.0	7.0

#ID = F3D14498
#Short = 1qn7_B
#Long = TRANSCRIPTION INITIATION FACTOR TFIID-1
#W = 8
#Organisms = Arabidopsis thaliana
#Description = CRYSTAL STRUCTURE OF THE T(-27) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
12.0	64.0	10.0	10.0
0.0	0.0	0.0	96.0
10.0	0.0	10.0	76.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
85.0	0.0	11.0	0.0
0.0	0.0	0.0	96.0
76.0	10.0	10.0	0.0

#ID = F3D14499
#Short = 1qn8_B
#Long = TRANSCRIPTION INITIATION FACTOR TFIID-1
#W = 8
#Organisms = Arabidopsis thaliana
#Description = CRYSTAL STRUCTURE OF THE T(-28) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
9.0	69.0	9.0	9.0
0.0	0.0	0.0	96.0
9.0	9.0	11.0	67.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
67.0	11.0	9.0	9.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14500
#Short = 1qn9_B
#Long = TRANSCRIPTION INITIATION FACTOR TFIID-1
#W = 8
#Organisms = Arabidopsis thaliana
#Description = CRYSTAL STRUCTURE OF THE C(-29) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
8.0	72.0	8.0	8.0
0.0	0.0	0.0	96.0
10.0	17.0	8.0	61.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
8.0	0.0	88.0	0.0
0.0	0.0	0.0	96.0
78.0	8.0	10.0	0.0

#ID = F3D14501
#Short = 1qna_B
#Long = TRANSCRIPTION INITIATION FACTOR TFIID-1
#W = 8
#Organisms = Arabidopsis thaliana
#Description = CRYSTAL STRUCTURE OF THE T(-30) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
11.0	69.0	8.0	8.0
0.0	0.0	0.0	96.0
8.0	8.0	8.0	72.0
2.0	8.0	8.0	78.0
0.0	0.0	0.0	96.0
87.0	0.0	0.0	9.0
96.0	0.0	0.0	0.0
87.0	1.0	8.0	0.0

#ID = F3D14502
#Short = 1qnb_B
#Long = TRANSCRIPTION INITIATION FACTOR TFIID-1
#W = 7
#Organisms = Arabidopsis thaliana
#Description = CRYSTAL STRUCTURE OF THE T(-25) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
96.0	0.0	0.0	0.0
16.0	13.0	13.0	54.0
0.0	1.0	13.0	82.0
0.0	0.0	0.0	96.0
82.0	1.0	13.0	0.0
0.0	0.0	0.0	96.0
83.0	0.0	13.0	0.0

#ID = F3D14503
#Short = 1qnc_B
#Long = TRANSCRIPTION INITIATION FACTOR TFIID-1
#W = 8
#Organisms = Arabidopsis thaliana
#Description = CRYSTAL STRUCTURE OF THE A(-31) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
0.0	74.0	12.0	10.0
0.0	0.0	0.0	96.0
12.0	21.0	10.0	53.0
0.0	12.0	10.0	74.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0

#ID = F3D14504
#Short = 1qne_B
#Long = TRANSCRIPTION INITIATION FACTOR TFIID-1
#W = 8
#Organisms = Arabidopsis thaliana
#Description = CRYSTAL STRUCTURE OF THE ADENOVIRUS MAJOR LATE PROMOTER TATA BOX BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2).
13.0	54.0	13.0	16.0
0.0	0.0	0.0	96.0
16.0	13.0	13.0	54.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14505
#Short = 1qp0_A
#Long = PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR)
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = PURINE REPRESSOR-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
54.0	13.0	13.0	16.0
24.0	24.0	24.0	24.0
13.0	54.0	13.0	16.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14506
#Short = 1qp4_A
#Long = PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR)
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = PURINE REPRESSOR-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
9.0	67.0	9.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	9.0	9.0	69.0
0.0	96.0	0.0	0.0
9.0	9.0	69.0	9.0

#ID = F3D14507
#Short = 1qp7_A
#Long = PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR)
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
54.0	13.0	16.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
16.0	13.0	54.0	13.0

#ID = F3D14508
#Short = 1qp9_AB
#Long = CYP1(HAP1-PC7) ACTIVATORY PROTEIN
#W = 18
#Organisms = Saccharomyces cerevisiae
#Description = STRUCTURE OF HAP1-PC7 COMPLEXED TO THE UAS OF CYC7
0.0	90.0	5.0	1.0
0.0	5.0	1.0	90.0
80.0	5.0	0.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	19.0	67.0	5.0
0.0	96.0	0.0	0.0
0.0	0.0	90.0	6.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
11.0	5.0	73.0	7.0
5.0	86.0	5.0	0.0
0.0	6.0	90.0	0.0

#ID = F3D14509
#Short = 1qp9_B
#Long = CYP1(HAP1-PC7) ACTIVATORY PROTEIN
#W = 9
#Organisms = Saccharomyces cerevisiae
#Description = STRUCTURE OF HAP1-PC7 COMPLEXED TO THE UAS OF CYC7
72.0	8.0	8.0	8.0
11.0	8.0	8.0	69.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
11.0	8.0	69.0	8.0
0.0	96.0	0.0	0.0
0.0	8.0	88.0	0.0

#ID = F3D14510
#Short = 1qp9_CD
#Long = CYP1(HAP1-PC7) ACTIVATORY PROTEIN
#W = 12
#Organisms = Saccharomyces cerevisiae
#Description = STRUCTURE OF HAP1-PC7 COMPLEXED TO THE UAS OF CYC7
11.0	5.0	73.0	7.0
0.0	96.0	0.0	0.0
0.0	5.0	86.0	5.0
79.0	5.0	5.0	7.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
73.0	5.0	13.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	6.0	90.0	0.0
0.0	96.0	0.0	0.0
5.0	5.0	81.0	5.0

#ID = F3D14511
#Short = 1qpi_A
#Long = PROTEIN (TETRACYCLINE REPRESSOR)
#W = 4
#Organisms = Escherichia coli
#Description = CRYSTAL STRUCTURE OF TETRACYCLINE REPRESSOR/OPERATOR COMPLEX
0.0	96.0	0.0	0.0
13.0	57.0	13.0	13.0
0.0	0.0	0.0	96.0
54.0	13.0	16.0	13.0

#ID = F3D14512
#Short = 1qqb_A
#Long = PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
13.0	57.0	13.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
13.0	16.0	54.0	13.0

#ID = F3D14513
#Short = 1qrv_A
#Long = HIGH MOBILITY GROUP PROTEIN D
#W = 6
#Organisms = Drosophila melanogaster
#Description = CRYSTAL STRUCTURE OF THE COMPLEX OF HMG-D AND DNA
19.0	19.0	39.0	19.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	76.0	0.0	20.0

#ID = F3D14514
#Short = 1qrv_AB
#Long = HIGH MOBILITY GROUP PROTEIN D
#W = 6
#Organisms = Drosophila melanogaster
#Description = CRYSTAL STRUCTURE OF THE COMPLEX OF HMG-D AND DNA
9.0	14.0	6.0	67.0
76.0	0.0	1.0	19.0
7.0	5.0	4.0	80.0
20.0	43.0	18.0	15.0
24.0	24.0	24.0	24.0
3.0	89.0	3.0	1.0

#ID = F3D14515
#Short = 1r0n_AB
#Long = Retinoic acid receptor RXR-alpha
#W = 11
#Organisms = Homo sapiens,Drosophila melanogaster
#Description = Crystal Structure of Heterodimeric Ecdsyone receptor DNA binding complex
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
64.0	16.0	16.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
48.0	16.0	16.0	16.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14516
#Short = 1r0n_B
#Long = Ecdysone receptor
#W = 5
#Organisms = Drosophila melanogaster
#Description = Crystal Structure of Heterodimeric Ecdsyone receptor DNA binding complex
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
16.0	13.0	13.0	54.0
16.0	54.0	13.0	13.0
96.0	0.0	0.0	0.0

#ID = F3D14517
#Short = 1r0o_AB
#Long = Ultraspiracle protein
#W = 10
#Organisms = Drosophila melanogaster
#Description = Crystal Structure of the Heterodimeric Ecdysone Receptor DNA-binding Complex
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
8.0	8.0	11.0	69.0
0.0	96.0	0.0	0.0
69.0	11.0	8.0	8.0
24.0	24.0	24.0	24.0
11.0	8.0	8.0	69.0
0.0	0.0	96.0	0.0
87.0	1.0	8.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14518
#Short = 1r0o_B
#Long = Ecdysone receptor
#W = 5
#Organisms = Drosophila melanogaster
#Description = Crystal Structure of the Heterodimeric Ecdysone Receptor DNA-binding Complex
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
16.0	13.0	13.0	54.0
13.0	54.0	16.0	13.0
96.0	0.0	0.0	0.0

#ID = F3D14519
#Short = 1r4i_AB
#Long = Androgen receptor
#W = 12
#Organisms = Rattus norvegicus
#Description = Crystal Structure of Androgen Receptor DNA-Binding Domain Bound to a Direct Repeat Response Element
17.0	14.0	14.0	51.0
7.0	0.0	82.0	7.0
24.0	24.0	24.0	24.0
81.0	0.0	8.0	7.0
0.0	96.0	0.0	0.0
14.0	14.0	7.0	61.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14520
#Short = 1r4o_AB
#Long = Glucocorticoid receptor
#W = 5
#Organisms = Rattus norvegicus
#Description = Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
13.0	13.0	13.0	57.0
24.0	24.0	24.0	24.0
16.0	54.0	13.0	13.0

#ID = F3D14521
#Short = 1r4r_AB
#Long = Glucocorticoid receptor
#W = 11
#Organisms = Rattus norvegicus
#Description = Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA
67.0	9.0	11.0	9.0
0.0	96.0	0.0	0.0
67.0	11.0	9.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
9.0	67.0	9.0	11.0

#ID = F3D14522
#Short = 1r8d_B
#Long = transcription activator MtaN
#W = 9
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal Structure of MtaN Bound to DNA
13.0	57.0	13.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	16.0	13.0	54.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14523
#Short = 1ram_AB
#Long = PROTEIN (TRANSCRIPTION FACTOR NF-KB P65)
#W = 8
#Organisms = Mus musculus
#Description = A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER
9.0	11.0	0.0	76.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
11.0	19.0	9.0	57.0
19.0	9.0	9.0	59.0

#ID = F3D14524
#Short = 1rcs_AB
#Long = TRP REPRESSOR
#W = 18
#Organisms = Escherichia coli (strain K12)
#Description = NMR STUDY OF TRP REPRESSOR-OPERATOR DNA COMPLEX
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
87.0	0.0	9.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
11.0	9.0	67.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	67.0	9.0	11.0
4.0	4.0	4.0	84.0
57.0	9.0	14.0	16.0
0.0	0.0	96.0	0.0
0.0	5.0	0.0	91.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14525
#Short = 1rcs_B
#Long = TRP REPRESSOR
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = NMR STUDY OF TRP REPRESSOR-OPERATOR DNA COMPLEX
8.0	56.0	16.0	16.0
8.0	8.0	8.0	72.0
56.0	16.0	16.0	8.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14526
#Short = 1rio_A
#Long = Repressor protein CI
#W = 9
#Organisms = Enterobacteria phage lambda
#Description = Structure of bacteriophage lambda cI-NTD in complex with sigma-region4 of Thermus aquaticus bound to DNA
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
9.0	9.0	11.0	67.0
9.0	11.0	67.0	9.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
67.0	9.0	11.0	9.0

#ID = F3D14527
#Short = 1rio_ABH
#Long = Repressor protein CI
#W = 21
#Organisms = Enterobacteria phage lambda,Thermus aquaticus
#Description = Structure of bacteriophage lambda cI-NTD in complex with sigma-region4 of Thermus aquaticus bound to DNA
11.0	8.0	5.0	72.0
0.0	0.0	96.0	0.0
2.0	2.0	8.0	84.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
1.0	2.0	93.0	0.0
0.0	23.0	4.0	69.0
66.0	14.0	8.0	8.0
0.0	96.0	0.0	0.0
0.0	5.0	2.0	89.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
2.0	5.0	8.0	81.0
3.0	0.0	93.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
84.0	5.0	2.0	5.0

#ID = F3D14528
#Short = 1rio_H
#Long = sigma factor SigA
#W = 7
#Organisms = Thermus aquaticus
#Description = Structure of bacteriophage lambda cI-NTD in complex with sigma-region4 of Thermus aquaticus bound to DNA
13.0	13.0	16.0	54.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
16.0	13.0	54.0	13.0

#ID = F3D14529
#Short = 1rm1_A
#Long = TATA-box binding protein
#W = 8
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
54.0	13.0	16.0	13.0
96.0	0.0	0.0	0.0
13.0	54.0	16.0	13.0

#ID = F3D14530
#Short = 1rm1_AC
#Long = TATA-box binding protein
#W = 8
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
54.0	16.0	13.0	13.0
96.0	0.0	0.0	0.0
13.0	57.0	13.0	13.0

#ID = F3D14531
#Short = 1rpe_LR
#Long = PROTEIN (434 REPRESSOR)
#W = 16
#Organisms = Enterobacteria phage lambda,Phage 434
#Description = THE PHAGE 434 OR2/R1-69 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
92.0	4.0	0.0	0.0
96.0	0.0	0.0	0.0
48.0	32.0	4.0	12.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
4.0	20.0	64.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
68.0	4.0	16.0	8.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
8.0	4.0	84.0	0.0
0.0	0.0	0.0	96.0
88.0	4.0	0.0	4.0

#ID = F3D14532
#Short = 1run_B
#Long = PROTEIN (CATABOLITE GENE ACTIVATOR PROTEIN (CAP))
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
13.0	54.0	16.0	13.0
54.0	13.0	16.0	13.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14533
#Short = 1ruo_B
#Long = PROTEIN (CATABOLITE GENE ACTIVATOR PROTEIN (CAP))
#W = 5
#Organisms = Escherichia coli (strain K12)
#Description = CATABOLITE GENE ACTIVATOR PROTEIN (CAP) MUTANT/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
57.0	13.0	13.0	13.0
13.0	54.0	16.0	13.0
96.0	0.0	0.0	0.0

#ID = F3D14534
#Short = 1rzr_AD
#Long = Glucose-resistance amylase regulator
#W = 14
#Organisms = Bacillus megaterium
#Description = crystal structure of transcriptional regulator-phosphoprotein-DNA complex
2.0	4.0	2.0	88.0
0.0	0.0	96.0	0.0
2.0	17.0	13.0	64.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
2.0	2.0	90.0	2.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
15.0	66.0	13.0	2.0
15.0	2.0	13.0	66.0
24.0	24.0	24.0	24.0
4.0	2.0	2.0	88.0
0.0	96.0	0.0	0.0
88.0	2.0	4.0	2.0

#ID = F3D14535
#Short = 1rzr_C
#Long = Glucose-resistance amylase regulator
#W = 8
#Organisms = Bacillus megaterium
#Description = crystal structure of transcriptional regulator-phosphoprotein-DNA complex
7.0	73.0	9.0	7.0
0.0	0.0	96.0	0.0
7.0	75.0	7.0	7.0
7.0	9.0	7.0	73.0
24.0	24.0	24.0	24.0
75.0	7.0	7.0	7.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14536
#Short = 1rzr_CG
#Long = Glucose-resistance amylase regulator
#W = 14
#Organisms = Bacillus megaterium
#Description = crystal structure of transcriptional regulator-phosphoprotein-DNA complex
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
84.0	4.0	4.0	4.0
82.0	4.0	4.0	6.0
82.0	4.0	6.0	4.0
4.0	4.0	82.0	6.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
4.0	84.0	4.0	4.0
4.0	4.0	4.0	84.0
24.0	24.0	24.0	24.0
82.0	4.0	4.0	6.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14537
#Short = 1s9k_CDE
#Long = Nuclear factor of activated T-cells, cytoplasmic 2
#W = 15
#Organisms = Homo sapiens
#Description = Crystal Structure of Human NFAT1 and Fos-Jun on the IL-2 ARRE1 Site
6.0	0.0	5.0	85.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
60.0	15.0	10.0	11.0
24.0	24.0	24.0	24.0
86.0	5.0	5.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
10.0	16.0	5.0	65.0
6.0	0.0	90.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
10.0	5.0	5.0	76.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14538
#Short = 1sax_A
#Long = Methicillin resistance regulatory protein mecI
#W = 7
#Organisms = Staphylococcus aureus,strain N315
#Description = Three-dimensional structure of s.aureus methicillin-resistance regulating transcriptional repressor meci in complex with 25-bp ds-DNA
19.0	9.0	11.0	57.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
57.0	9.0	19.0	11.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
78.0	9.0	9.0	0.0

#ID = F3D14539
#Short = 1sax_AB
#Long = Methicillin resistance regulatory protein mecI
#W = 15
#Organisms = Staphylococcus aureus,strain N315
#Description = Three-dimensional structure of s.aureus methicillin-resistance regulating transcriptional repressor meci in complex with 25-bp ds-DNA
96.0	0.0	0.0	0.0
8.0	10.0	13.0	65.0
0.0	22.0	0.0	74.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
74.0	10.0	4.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
10.0	8.0	4.0	74.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
74.0	0.0	22.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
80.0	8.0	8.0	0.0

#ID = F3D14540
#Short = 1srs_AB
#Long = PROTEIN (SERUM RESPONSE FACTOR (SRF))
#W = 10
#Organisms = Homo sapiens
#Description = SERUM RESPONSE FACTOR (SRF) CORE COMPLEXED WITH SPECIFIC SRE DNA
49.0	41.0	3.0	3.0
3.0	74.0	0.0	19.0
7.0	3.0	5.0	81.0
96.0	0.0	0.0	0.0
78.0	7.0	6.0	5.0
7.0	21.0	5.0	63.0
3.0	1.0	0.0	92.0
74.0	5.0	8.0	9.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14541
#Short = 1srs_B
#Long = PROTEIN (SERUM RESPONSE FACTOR (SRF))
#W = 6
#Organisms = Homo sapiens
#Description = SERUM RESPONSE FACTOR (SRF) CORE COMPLEXED WITH SPECIFIC SRE DNA
6.0	6.0	9.0	75.0
0.0	0.0	0.0	96.0
75.0	6.0	9.0	6.0
0.0	0.0	96.0	0.0
9.0	6.0	75.0	6.0
13.0	71.0	6.0	6.0

#ID = F3D14542
#Short = 1svc_P
#Long = PROTEIN (NUCLEAR FACTOR KAPPA-B (NF-KB))
#W = 7
#Organisms = Homo sapiens
#Description = NFKB P50 HOMODIMER BOUND TO DNA
13.0	13.0	57.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
13.0	57.0	13.0	13.0

#ID = F3D14543
#Short = 1t2k_ABCD
#Long = Interferon regulatory factor 3
#W = 20
#Organisms = Homo sapiens
#Description = Structure Of The DNA Binding Domains Of IRF3, ATF-2 and Jun Bound To DNA
8.0	9.0	8.0	71.0
0.0	0.0	0.0	96.0
6.0	8.0	11.0	71.0
75.0	15.0	2.0	4.0
69.0	8.0	8.0	11.0
24.0	24.0	24.0	24.0
8.0	4.0	6.0	78.0
0.0	0.0	0.0	96.0
4.0	3.0	2.0	87.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
69.0	8.0	11.0	8.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14544
#Short = 1t2k_D
#Long = Cyclic-AMP-dependent transcription factor ATF-2
#W = 6
#Organisms = Homo sapiens
#Description = Structure Of The DNA Binding Domains Of IRF3, ATF-2 and Jun Bound To DNA
12.0	12.0	12.0	60.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	84.0	0.0	12.0
96.0	0.0	0.0	0.0
60.0	12.0	12.0	12.0

#ID = F3D14545
#Short = 1tf3_A
#Long = TRANSCRIPTION FACTOR IIIA
#W = 11
#Organisms = Xenopus laevis
#Description = TFIIIA FINGER 1-3 BOUND TO DNA, NMR, 22 STRUCTURES
9.0	9.0	54.0	24.0
14.0	9.0	6.0	67.0
1.0	91.0	4.0	0.0
9.0	9.0	4.0	74.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
24.0	67.0	1.0	4.0
0.0	96.0	0.0	0.0

#ID = F3D14546
#Short = 1tf6_A
#Long = PROTEIN (TRANSCRIPTION FACTOR IIIA)
#W = 24
#Organisms = Xenopus laevis
#Description = CO-CRYSTAL STRUCTURE OF XENOPUS TFIIIA ZINC FINGER DOMAIN BOUND TO THE 5S RIBOSOMAL RNA GENE INTERNAL CONTROL REGION
5.0	2.0	84.0	5.0
0.0	0.0	96.0	0.0
8.0	8.0	5.0	75.0
5.0	11.0	2.0	78.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
66.0	20.0	5.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	20.0	10.0	58.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
81.0	5.0	2.0	8.0

#ID = F3D14547
#Short = 1tgh_A
#Long = PROTEIN (TATA BINDING PROTEIN (TBP))
#W = 8
#Organisms = Homo sapiens
#Description = TATA BINDING PROTEIN (TBP)/DNA COMPLEX
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
13.0	13.0	13.0	57.0
57.0	13.0	13.0	13.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14548
#Short = 1tqe_PQ
#Long = Myocyte-specific enhancer factor 2B
#W = 10
#Organisms = Homo sapiens
#Description = Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
13.0	13.0	13.0	57.0
0.0	0.0	0.0	96.0
57.0	13.0	13.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14549
#Short = 1tqe_RS
#Long = Myocyte-specific enhancer factor 2B
#W = 10
#Organisms = Homo sapiens
#Description = Crystal structure of the p300 TAZ2 domain bound to MEF2 on DNA
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
54.0	16.0	13.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	16.0	13.0	54.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14550
#Short = 1tro_AG
#Long = PROTEIN (TRP REPRESSOR)
#W = 9
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTION
8.0	10.0	65.0	13.0
13.0	18.0	13.0	52.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
56.0	8.0	17.0	15.0
13.0	69.0	0.0	14.0

#ID = F3D14551
#Short = 1trr_AB
#Long = PROTEIN (TRP REPRESSOR)
#W = 14
#Organisms = Escherichia coli (strain K12)
#Description = TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEX
88.0	2.0	2.0	4.0
24.0	24.0	24.0	24.0
4.0	86.0	4.0	2.0
0.0	16.0	66.0	14.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
17.0	16.0	12.0	51.0
24.0	24.0	24.0	24.0
4.0	2.0	88.0	2.0
17.0	14.0	2.0	63.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14552
#Short = 1trr_DEGH
#Long = PROTEIN (TRP REPRESSOR)
#W = 28
#Organisms = Escherichia coli (strain K12)
#Description = TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
75.0	9.0	6.0	6.0
3.0	87.0	3.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
3.0	3.0	87.0	3.0
0.0	96.0	0.0	0.0
9.0	9.0	9.0	69.0
87.0	3.0	3.0	3.0
0.0	0.0	93.0	3.0
3.0	87.0	3.0	3.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	3.0	87.0	3.0
6.0	9.0	9.0	72.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14553
#Short = 1u8b_A
#Long = Ada polyprotein
#W = 9
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of the methylated N-ADA/DNA complex
89.0	7.0	0.0	0.0
7.0	0.0	0.0	89.0
27.0	13.0	13.0	43.0
0.0	0.0	0.0	96.0
41.0	15.0	13.0	27.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0

#ID = F3D14554
#Short = 1u8r_ABCD
#Long = Iron-dependent repressor ideR
#W = 17
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions
2.0	2.0	4.0	88.0
9.0	7.0	5.0	75.0
96.0	0.0	0.0	0.0
10.0	5.0	75.0	6.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
10.0	70.0	7.0	9.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
12.0	12.0	58.0	14.0
0.0	0.0	0.0	96.0
10.0	6.0	75.0	5.0
5.0	78.0	6.0	7.0
0.0	0.0	0.0	96.0

#ID = F3D14555
#Short = 1u8r_B
#Long = Iron-dependent repressor ideR
#W = 6
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions
10.0	8.0	0.0	78.0
19.0	17.0	8.0	52.0
96.0	0.0	0.0	0.0
17.0	17.0	45.0	17.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14556
#Short = 1u8r_GHIJ
#Long = Iron-dependent repressor ideR
#W = 17
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions
2.0	2.0	4.0	88.0
10.0	7.0	12.0	67.0
96.0	0.0	0.0	0.0
11.0	9.0	69.0	7.0
2.0	88.0	4.0	2.0
96.0	0.0	0.0	0.0
7.0	69.0	11.0	9.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
7.0	13.0	67.0	9.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
9.0	69.0	9.0	9.0
0.0	0.0	0.0	96.0

#ID = F3D14557
#Short = 1ubd_C
#Long = PROTEIN (YY1 ZINC FINGER DOMAIN)
#W = 11
#Organisms = Homo sapiens
#Description = CO-CRYSTAL STRUCTURE OF HUMAN YY1 ZINC FINGER DOMAIN BOUND TO THE ADENO-ASSOCIATED VIRUS P5 INITIATOR ELEMENT
10.0	10.0	23.0	53.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	1.0	21.0	74.0
10.0	10.0	66.0	10.0

#ID = F3D14558
#Short = 1vkx_AB
#Long = PROTEIN (NF-KAPPA B P65 SUBUNIT)
#W = 11
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF THE NFKB P50/P65 HETERODIMER COMPLEXED TO THE IMMUNOGLOBULIN KB DNA
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
64.0	10.0	12.0	10.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	22.0	74.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
53.0	12.0	10.0	21.0

#ID = F3D14559
#Short = 1vol_AB
#Long = PROTEIN (TATA BINDING PROTEIN (TBP))
#W = 8
#Organisms = Arabidopsis thaliana
#Description = TFIIB (HUMAN CORE DOMAIN)/TBP (A.THALIANA)/TATA ELEMENT TERNARY COMPLEX
0.0	68.0	15.0	13.0
0.0	0.0	0.0	96.0
13.0	13.0	13.0	57.0
0.0	1.0	13.0	82.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14560
#Short = 1vol_B
#Long = PROTEIN (TATA BINDING PROTEIN (TBP))
#W = 8
#Organisms = Arabidopsis thaliana
#Description = TFIIB (HUMAN CORE DOMAIN)/TBP (A.THALIANA)/TATA ELEMENT TERNARY COMPLEX
2.0	68.0	13.0	13.0
0.0	0.0	0.0	96.0
16.0	13.0	13.0	54.0
1.0	0.0	13.0	82.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14561
#Short = 1vtn_C
#Long = HNF-3/FORK HEAD DNA-RECOGNITION MOTIF
#W = 9
#Organisms = Homo sapiens
#Description = CO-CRYSTAL STRUCTURE OF THE HNF-3/FORK HEAD DNA-RECOGNITION MOTIF RESEMBLES HISTONE H5
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
57.0	21.0	9.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
11.0	76.0	0.0	9.0
96.0	0.0	0.0	0.0
67.0	9.0	9.0	11.0

#ID = F3D14562
#Short = 1vto_B
#Long = TATA BINDING PROTEIN
#W = 8
#Organisms = Arabidopsis thaliana
#Description = 1.9 A RESOLUTION REFINED STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF TATAAAAG
16.0	54.0	13.0	13.0
0.0	0.0	0.0	96.0
13.0	13.0	13.0	57.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14563
#Short = 1xbr_AB
#Long = PROTEIN (T PROTEIN)
#W = 18
#Organisms = Xenopus laevis
#Description = T DOMAIN FROM XENOPUS LAEVIS BOUND TO DNA
1.0	0.0	1.0	94.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
13.0	67.0	15.0	1.0
24.0	24.0	24.0	24.0
17.0	17.0	13.0	49.0
24.0	24.0	24.0	24.0
19.0	17.0	38.0	22.0
8.0	0.0	88.0	0.0
9.0	7.0	0.0	80.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0

#ID = F3D14564
#Short = 1xpx_A
#Long = Protein prospero
#W = 4
#Organisms = Drosophila melanogaster
#Description = Structural basis of prospero-DNA interaction; implications for transcription regulation in developing cells
16.0	54.0	13.0	13.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
13.0	16.0	54.0	13.0

#ID = F3D14565
#Short = 1xs9_A
#Long = Multiple antibiotic resistance protein marA
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = A MODEL OF THE TERNARY COMPLEX FORMED BETWEEN MARA, THE ALPHA-CTD OF RNA POLYMERASE AND DNA
17.0	8.0	8.0	63.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
63.0	17.0	8.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
69.0	8.0	8.0	11.0
96.0	0.0	0.0	0.0

#ID = F3D14566
#Short = 1ynw_AB
#Long = Vitamin D3 Receptor
#W = 14
#Organisms = Homo sapiens
#Description = Crystal Structure of Vitamin D Receptor and 9-cis Retinoic Acid Receptor DNA-Binding Domains Bound to a DR3 Response Element
0.0	0.0	5.0	91.0
0.0	0.0	96.0	0.0
56.0	18.0	11.0	11.0
0.0	96.0	0.0	0.0
11.0	64.0	5.0	16.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	16.0	16.0	56.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14567
#Short = 1ynw_B
#Long = Retinoic acid receptor RXR-alpha
#W = 5
#Organisms = Homo sapiens
#Description = Crystal Structure of Vitamin D Receptor and 9-cis Retinoic Acid Receptor DNA-Binding Domains Bound to a DR3 Response Element
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
54.0	13.0	13.0	16.0
0.0	96.0	0.0	0.0
13.0	57.0	13.0	13.0

#ID = F3D14568
#Short = 1yo5_C
#Long = SAM pointed domain containing ets transcription fa
#W = 5
#Organisms = Homo sapiens
#Description = Analysis of the 2.0A crystal structure of the protein-DNA complex of human PDEF Ets domain bound to the prostate specific antigen regulatory site
67.0	9.0	11.0	9.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
67.0	11.0	9.0	9.0
67.0	9.0	9.0	11.0

#ID = F3D14569
#Short = 1yrn_AB
#Long = PROTEIN (MAT A1 HOMEODOMAIN)
#W = 17
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = CRYSTAL STRUCTURE OF THE MATA1/MATALPHA2 HOMEODOMAIN HETERODIMER BOUND TO DNA
4.0	0.0	0.0	92.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
3.0	0.0	90.0	3.0
24.0	24.0	24.0	24.0
64.0	7.0	14.0	11.0
87.0	3.0	3.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
17.0	3.0	3.0	73.0
3.0	11.0	9.0	73.0
0.0	0.0	0.0	96.0
84.0	1.0	0.0	11.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14570
#Short = 1ysa_D
#Long = PROTEIN (GCN4)
#W = 4
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = THE GCN4 BASIC REGION LEUCINE ZIPPER BINDS DNA AS A DIMER OF UNINTERRUPTED ALPHA HELICES: CRYSTAL STRUCTURE OF THE PROTEIN-DNA COMPLEX
0.0	0.0	0.0	96.0
13.0	13.0	54.0	16.0
57.0	13.0	13.0	13.0
0.0	96.0	0.0	0.0

#ID = F3D14571
#Short = 1ytf_AC
#Long = PROTEIN (TATA BINDING PROTEIN (TBP))
#W = 10
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = YEAST TFIIA/TBP/DNA COMPLEX
7.0	7.0	73.0	9.0
0.0	0.0	0.0	96.0
7.0	9.0	7.0	73.0
0.0	8.0	7.0	81.0
7.0	1.0	0.0	88.0
73.0	9.0	7.0	7.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14572
#Short = 1z9c_CD
#Long = Organic hydroperoxide resistance transcriptional r
#W = 19
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of OhrR bound to the ohrA promoter: Structure of MarR family protein with operator DNA
0.0	6.0	2.0	88.0
4.0	2.0	2.0	88.0
24.0	24.0	24.0	24.0
58.0	18.0	18.0	2.0
96.0	0.0	0.0	0.0
2.0	0.0	4.0	90.0
2.0	2.0	4.0	88.0
24.0	24.0	24.0	24.0
45.0	5.0	12.0	34.0
24.0	24.0	24.0	24.0
14.0	8.0	10.0	64.0
2.0	2.0	2.0	90.0
24.0	24.0	24.0	24.0
2.0	9.0	5.0	80.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
94.0	0.0	0.0	2.0

#ID = F3D14573
#Short = 1z9c_EF
#Long = Organic hydroperoxide resistance transcriptional r
#W = 20
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of OhrR bound to the ohrA promoter: Structure of MarR family protein with operator DNA
3.0	0.0	3.0	90.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
85.0	5.0	1.0	5.0
92.0	1.0	1.0	2.0
24.0	24.0	24.0	24.0
3.0	53.0	6.0	34.0
24.0	24.0	24.0	24.0
72.0	3.0	3.0	18.0
24.0	24.0	24.0	24.0
9.0	13.0	3.0	71.0
1.0	0.0	1.0	94.0
24.0	24.0	24.0	24.0
48.0	3.0	42.0	3.0
24.0	24.0	24.0	24.0
0.0	1.0	7.0	88.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
95.0	0.0	1.0	0.0
92.0	1.0	2.0	1.0

#ID = F3D14574
#Short = 1zg1_AB
#Long = Nitrate/nitrite response regulator protein narL
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = NarL complexed to nirB promoter non-palindromic tail-to-tail DNA site
0.0	0.0	0.0	96.0
79.0	7.0	5.0	5.0
5.0	86.0	5.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
79.0	7.0	5.0	5.0
11.0	0.0	11.0	74.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
69.0	11.0	11.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14575
#Short = 1zg1_E
#Long = Nitrate/nitrite response regulator protein narL
#W = 4
#Organisms = Escherichia coli (strain K12)
#Description = NarL complexed to nirB promoter non-palindromic tail-to-tail DNA site
1.0	8.0	0.0	87.0
72.0	8.0	8.0	8.0
8.0	69.0	11.0	8.0
8.0	8.0	8.0	72.0

#ID = F3D14576
#Short = 1zg1_EF
#Long = Nitrate/nitrite response regulator protein narL
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = NarL complexed to nirB promoter non-palindromic tail-to-tail DNA site
0.0	0.0	0.0	96.0
91.0	0.0	5.0	0.0
4.0	84.0	4.0	4.0
6.0	4.0	4.0	82.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	18.0	13.0	61.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
79.0	13.0	0.0	4.0
5.0	4.0	0.0	87.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
1.0	13.0	4.0	78.0
96.0	0.0	0.0	0.0

#ID = F3D14577
#Short = 1zg5_AB
#Long = Nitrate/nitrite response regulator protein narL
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = NarL complexed to narG-89 promoter palindromic tail-to-tail DNA site
0.0	0.0	0.0	96.0
65.0	13.0	9.0	9.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
9.0	9.0	9.0	69.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
63.0	9.0	15.0	9.0
0.0	0.0	96.0	0.0
9.0	24.0	53.0	10.0
0.0	0.0	96.0	0.0
5.0	4.0	24.0	63.0
0.0	9.0	5.0	82.0
96.0	0.0	0.0	0.0

#ID = F3D14578
#Short = 1zg5_E
#Long = Nitrate/nitrite response regulator protein narL
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = NarL complexed to narG-89 promoter palindromic tail-to-tail DNA site
0.0	0.0	0.0	96.0
42.0	23.0	21.0	10.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
23.0	42.0	10.0	21.0
0.0	96.0	0.0	0.0

#ID = F3D14579
#Short = 1zg5_EF
#Long = Nitrate/nitrite response regulator protein narL
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = NarL complexed to narG-89 promoter palindromic tail-to-tail DNA site
0.0	0.0	0.0	96.0
63.0	10.0	10.0	13.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	75.0	2.0	12.0
0.0	96.0	0.0	0.0
12.0	7.0	12.0	65.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
72.0	12.0	5.0	7.0
0.0	0.0	96.0	0.0
4.0	2.0	80.0	10.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
2.0	10.0	12.0	72.0
96.0	0.0	0.0	0.0

#ID = F3D14580
#Short = 1zlk_A
#Long = Dormancy Survival Regulator
#W = 7
#Organisms = Mycobacterium tuberculosis
#Description = Crystal Structure of the Mycobacterium tuberculosis Hypoxic Response Regulator DosR C-terminal Domain-DNA Complex
57.0	13.0	13.0	13.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
16.0	13.0	13.0	54.0

#ID = F3D14581
#Short = 1zlk_AB
#Long = Dormancy Survival Regulator
#W = 15
#Organisms = Mycobacterium tuberculosis
#Description = Crystal Structure of the Mycobacterium tuberculosis Hypoxic Response Regulator DosR C-terminal Domain-DNA Complex
73.0	7.0	9.0	7.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	7.0	7.0	75.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
75.0	7.0	7.0	7.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
7.0	73.0	7.0	9.0
0.0	96.0	0.0	0.0

#ID = F3D14582
#Short = 1zme_CD
#Long = PROLINE UTILIZATION TRANSCRIPTION ACTIVATOR
#W = 16
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = CRYSTAL STRUCTURE OF PUT3/DNA COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
16.0	54.0	13.0	13.0
54.0	13.0	16.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14583
#Short = 1zme_D
#Long = PROLINE UTILIZATION TRANSCRIPTION ACTIVATOR
#W = 9
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = CRYSTAL STRUCTURE OF PUT3/DNA COMPLEX
0.0	96.0	0.0	0.0
13.0	54.0	16.0	13.0
57.0	13.0	13.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14584
#Short = 1zq3_P
#Long = Homeotic bicoid protein
#W = 8
#Organisms = Drosophila melanogaster
#Description = NMR Solution Structure of the Bicoid Homeodomain Bound to the Consensus DNA Binding Site TAATCC
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
54.0	16.0	13.0	13.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
13.0	57.0	13.0	13.0

#ID = F3D14585
#Short = 1zrc_B
#Long = Catabolite gene activator
#W = 5
#Organisms = Escherichia coli (strain K12)
#Description = 4 Crystal structures of CAP-DNA with all base-pair substitutions at position 6, CAP-ICAP38 DNA
0.0	0.0	0.0	96.0
11.0	67.0	9.0	9.0
67.0	11.0	9.0	9.0
9.0	69.0	9.0	9.0
96.0	0.0	0.0	0.0

#ID = F3D14586
#Short = 1zre_B
#Long = Catabolite gene activator
#W = 5
#Organisms = Escherichia coli (strain K12)
#Description = 4 crystal structures of CAP-DNA with all base-pair substitutions at position 6, CAP-[6G;17C]ICAP38 DNA
0.0	0.0	0.0	96.0
0.0	76.0	0.0	20.0
20.0	38.0	19.0	19.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14587
#Short = 1zrf_A
#Long = Catabolite gene activator
#W = 11
#Organisms = Escherichia coli (strain K12)
#Description = 4 crystal structures of CAP-DNA with all base-pair substitutions at position 6, CAP-[6C;17G]ICAP38 DNA
9.0	69.0	9.0	9.0
9.0	9.0	67.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	9.0	9.0	69.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14588
#Short = 1zs4_A
#Long = Regulatory protein CII
#W = 5
#Organisms = Enterobacteria phage lambda
#Description = Structure of bacteriophage lambda cII protein in complex with DNA
8.0	8.0	72.0	8.0
0.0	96.0	0.0	0.0
87.0	0.0	8.0	1.0
69.0	11.0	8.0	8.0
8.0	69.0	11.0	8.0

#ID = F3D14589
#Short = 1zs4_ACD
#Long = Regulatory protein CII
#W = 16
#Organisms = Enterobacteria phage lambda
#Description = Structure of bacteriophage lambda cII protein in complex with DNA
14.0	12.0	6.0	64.0
7.0	0.0	89.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
90.0	0.0	6.0	0.0
76.0	8.0	6.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
14.0	64.0	6.0	12.0
6.0	0.0	89.0	1.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14590
#Short = 2a07_FJ
#Long = Forkhead box protein P2
#W = 5
#Organisms = Homo sapiens
#Description = Crystal Structure of Foxp2 bound Specifically to DNA.
73.0	9.0	7.0	7.0
7.0	75.0	7.0	7.0
73.0	9.0	7.0	7.0
96.0	0.0	0.0	0.0
73.0	9.0	7.0	7.0

#ID = F3D14591
#Short = 2a07_IK
#Long = Forkhead box protein P2
#W = 6
#Organisms = Homo sapiens
#Description = Crystal Structure of Foxp2 bound Specifically to DNA.
13.0	6.0	9.0	68.0
0.0	0.0	0.0	96.0
8.0	0.0	6.0	82.0
6.0	6.0	78.0	6.0
6.0	6.0	6.0	78.0
1.0	6.0	0.0	89.0

#ID = F3D14592
#Short = 2a07_K
#Long = Forkhead box protein P2
#W = 5
#Organisms = Homo sapiens
#Description = Crystal Structure of Foxp2 bound Specifically to DNA.
54.0	13.0	13.0	16.0
13.0	16.0	13.0	54.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0

#ID = F3D14593
#Short = 2a66_A
#Long = Orphan nuclear receptor NR5A2
#W = 9
#Organisms = Homo sapiens
#Description = Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter
8.0	8.0	11.0	69.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
1.0	8.0	0.0	87.0
8.0	17.0	10.0	61.0
17.0	0.0	69.0	10.0
96.0	0.0	0.0	0.0

#ID = F3D14594
#Short = 2as5_GM
#Long = Forkhead box protein P2
#W = 13
#Organisms = Homo sapiens
#Description = Structure of the DNA binding domains of NFAT and FOXP2 bound specifically to DNA.
54.0	16.0	13.0	13.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
54.0	13.0	16.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14595
#Short = 2as5_N
#Long = Nuclear factor of activated T-cells, cytoplasmic 2
#W = 4
#Organisms = Homo sapiens
#Description = Structure of the DNA binding domains of NFAT and FOXP2 bound specifically to DNA.
4.0	2.0	88.0	2.0
0.0	0.0	95.0	1.0
94.0	0.0	2.0	0.0
39.0	14.0	29.0	14.0

#ID = F3D14596
#Short = 2ayb_AB
#Long = Regulatory protein E2
#W = 16
#Organisms = Alphapapillomavirus 10,Human papillomavirus type 6a
#Description = Crystal structure of HPV6a E2 DNA Binding Domain bound to a 16 base pair DNA target
5.0	80.0	5.0	6.0
96.0	0.0	0.0	0.0
81.0	5.0	5.0	5.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
6.0	5.0	80.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	80.0	5.0	5.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
6.0	5.0	5.0	80.0
0.0	0.0	0.0	96.0
5.0	6.0	80.0	5.0

#ID = F3D14597
#Short = 2ayb_B
#Long = Regulatory protein E2
#W = 6
#Organisms = Alphapapillomavirus 10,Human papillomavirus type 6a
#Description = Crystal structure of HPV6a E2 DNA Binding Domain bound to a 16 base pair DNA target
7.0	73.0	7.0	9.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
7.0	9.0	7.0	73.0
7.0	7.0	9.0	73.0
7.0	9.0	73.0	7.0

#ID = F3D14598
#Short = 2ayg_A
#Long = Regulatory protein E2
#W = 6
#Organisms = Alphapapillomavirus 10,Human papillomavirus type 6a
#Description = Crystal structure of HPV6a E2 DNA binding domain bound to an 18 base pair DNA target
7.0	73.0	9.0	7.0
75.0	7.0	7.0	7.0
75.0	7.0	7.0	7.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	7.0	75.0	7.0

#ID = F3D14599
#Short = 2ayg_AB
#Long = Regulatory protein E2
#W = 16
#Organisms = Alphapapillomavirus 10,Human papillomavirus type 6a
#Description = Crystal structure of HPV6a E2 DNA binding domain bound to an 18 base pair DNA target
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
6.0	0.0	0.0	90.0
93.0	0.0	0.0	3.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	12.0	84.0	0.0
54.0	27.0	6.0	9.0
54.0	27.0	6.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	78.0	3.0	9.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
81.0	6.0	0.0	9.0
81.0	3.0	0.0	12.0

#ID = F3D14600
#Short = 2bjc_A
#Long = LACTOSE OPERON REPRESSOR
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = NMR STRUCTURE OF A PROTEIN-DNA COMPLEX OF AN ALTERED SPECIFICITY MUTANT OF THE LAC REPRESSOR HEADPIECE THAT MIMICS THE GAL REPRESSOR
7.0	73.0	9.0	7.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
7.0	7.0	7.0	75.0
73.0	7.0	9.0	7.0
7.0	73.0	9.0	7.0

#ID = F3D14601
#Short = 2bjc_AB
#Long = LACTOSE OPERON REPRESSOR
#W = 12
#Organisms = Escherichia coli (strain K12)
#Description = NMR STRUCTURE OF A PROTEIN-DNA COMPLEX OF AN ALTERED SPECIFICITY MUTANT OF THE LAC REPRESSOR HEADPIECE THAT MIMICS THE GAL REPRESSOR
6.0	5.0	80.0	5.0
6.0	5.0	5.0	80.0
80.0	6.0	5.0	5.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
5.0	5.0	6.0	80.0
80.0	6.0	5.0	5.0
6.0	80.0	5.0	5.0

#ID = F3D14602
#Short = 2c6y_A
#Long = FORKHEAD BOX PROTEIN K2
#W = 9
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF INTERLEUKIN ENHANCER-BINDING FACTOR 1 BOUND TO DNA
13.0	3.0	11.0	69.0
51.0	23.0	19.0	3.0
24.0	24.0	24.0	24.0
3.0	0.0	0.0	93.0
8.0	6.0	76.0	6.0
12.0	9.0	13.0	62.0
0.0	14.0	0.0	82.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14603
#Short = 2c6y_AB
#Long = FORKHEAD BOX PROTEIN K2
#W = 11
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF INTERLEUKIN ENHANCER-BINDING FACTOR 1 BOUND TO DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
5.0	0.0	5.0	86.0
80.0	5.0	6.0	5.0
0.0	0.0	0.0	96.0
5.0	1.0	5.0	85.0
16.0	10.0	60.0	10.0
15.0	10.0	10.0	61.0
0.0	10.0	1.0	85.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14604
#Short = 2c7a_AB
#Long = PROGESTERONE RECEPTOR
#W = 17
#Organisms = Homo sapiens
#Description = STRUCTURE OF THE PROGESTERONE RECEPTOR-DNA COMPLEX
10.0	70.0	8.0	8.0
56.0	12.0	16.0	12.0
0.0	0.0	96.0	0.0
83.0	0.0	5.0	8.0
66.0	8.0	14.0	8.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
4.0	12.0	8.0	72.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0

#ID = F3D14605
#Short = 2c7a_B
#Long = PROGESTERONE RECEPTOR
#W = 7
#Organisms = Homo sapiens
#Description = STRUCTURE OF THE PROGESTERONE RECEPTOR-DNA COMPLEX
6.0	75.0	6.0	9.0
68.0	13.0	6.0	9.0
9.0	6.0	75.0	6.0
24.0	24.0	24.0	24.0
78.0	6.0	6.0	6.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14606
#Short = 2c9l_YZ
#Long = BZLF1 TRANS-ACTIVATOR PROTEIN
#W = 7
#Organisms = Epstein-Barr virus (strain B95-8) (HHV-4),Human herpesvirus 4
#Description = STRUCTURE OF THE EPSTEIN-BARR VIRUS ZEBRA PROTEIN
0.0	0.0	0.0	96.0
16.0	13.0	54.0	13.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
13.0	54.0	16.0	13.0
96.0	0.0	0.0	0.0

#ID = F3D14607
#Short = 2c9l_Z
#Long = BZLF1 TRANS-ACTIVATOR PROTEIN
#W = 5
#Organisms = Epstein-Barr virus (strain B95-8) (HHV-4),Human herpesvirus 4
#Description = STRUCTURE OF THE EPSTEIN-BARR VIRUS ZEBRA PROTEIN
0.0	0.0	0.0	96.0
13.0	13.0	54.0	16.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
16.0	13.0	13.0	54.0

#ID = F3D14608
#Short = 2c9n_YZ
#Long = BZLF1 TRANS-ACTIVATOR PROTEIN
#W = 7
#Organisms = Epstein-Barr virus (strain B95-8) (HHV-4),Human herpesvirus 4
#Description = STRUCTURE OF THE EPSTEIN-BARR VIRUS ZEBRA PROTEIN AT APPROXIMATELY 3.5 ANGSTROM RESOLUTION
0.0	0.0	0.0	96.0
9.0	9.0	67.0	11.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
11.0	67.0	9.0	9.0
69.0	9.0	9.0	9.0

#ID = F3D14609
#Short = 2cgp_A
#Long = PROTEIN (CATABOLITE GENE ACTIVATOR PROTEIN)
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = CATABOLITE GENE ACTIVATOR PROTEIN/DNA COMPLEX, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
10.0	10.0	10.0	66.0
0.0	0.0	96.0	0.0
0.0	12.0	10.0	74.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
12.0	64.0	10.0	10.0

#ID = F3D14610
#Short = 2d45_AB
#Long = Methicillin resistance regulatory protein mecI
#W = 13
#Organisms = Staphylococcus aureus,strain N315
#Description = Crystal structure of the MecI-mecA repressor-operator complex
0.0	0.0	0.0	96.0
49.0	15.0	26.0	6.0
24.0	24.0	24.0	24.0
0.0	7.0	0.0	89.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
69.0	8.0	13.0	6.0
6.0	19.0	9.0	62.0
92.0	1.0	3.0	0.0
0.0	9.0	0.0	87.0
0.0	0.0	96.0	0.0
0.0	3.0	0.0	93.0
83.0	0.0	13.0	0.0

#ID = F3D14611
#Short = 2d45_B
#Long = Methicillin resistance regulatory protein mecI
#W = 7
#Organisms = Staphylococcus aureus,strain N315
#Description = Crystal structure of the MecI-mecA repressor-operator complex
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
8.0	17.0	52.0	19.0
17.0	17.0	17.0	45.0
78.0	0.0	10.0	8.0

#ID = F3D14612
#Short = 2d45_CD
#Long = Methicillin resistance regulatory protein mecI
#W = 12
#Organisms = Staphylococcus aureus,strain N315
#Description = Crystal structure of the MecI-mecA repressor-operator complex
96.0	0.0	0.0	0.0
5.0	81.0	5.0	5.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	5.0	2.0	84.0
5.0	5.0	81.0	5.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
11.0	11.0	63.0	11.0
11.0	11.0	5.0	69.0
96.0	0.0	0.0	0.0

#ID = F3D14613
#Short = 2d5v_B
#Long = Hepatocyte nuclear factor 6
#W = 9
#Organisms = Rattus norvegicus,Xenopus (Silurana) tropicalis,Xenopus tropicalis (Western clawed frog)
#Description = Crystal structure of HNF-6alpha DNA-binding domain in complex with the TTR promoter
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
8.0	16.0	8.0	64.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
16.0	16.0	8.0	56.0
72.0	8.0	8.0	8.0

#ID = F3D14614
#Short = 2drp_D
#Long = PROTEIN (TRAMTRACK DNA-BINDING DOMAIN)
#W = 8
#Organisms = Drosophila melanogaster
#Description = THE CRYSTAL STRUCTURE OF A TWO ZINC-FINGER PEPTIDE REVEALS AN EXTENSION TO THE RULES FOR ZINC-FINGER/DNA RECOGNITION
11.0	11.0	11.0	63.0
9.0	10.0	11.0	66.0
66.0	6.0	20.0	4.0
0.0	1.0	0.0	95.0
0.0	96.0	0.0	0.0
0.0	95.0	0.0	1.0
1.0	1.0	0.0	94.0
11.0	22.0	20.0	43.0

#ID = F3D14615
#Short = 2e1c_A
#Long = Putative HTH-type transcriptional regulator PH1519
#W = 5
#Organisms = Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
#Description = Structure of Putative HTH-type transcriptional regulator PH1519/DNA Complex
9.0	9.0	9.0	69.0
9.0	11.0	9.0	67.0
11.0	9.0	9.0	67.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14616
#Short = 2e42_A
#Long = CCAAT/enhancer-binding protein beta
#W = 6
#Organisms = Homo sapiens
#Description = Crystal structure of C/EBPbeta Bzip homodimer V285A mutant bound to A High Affinity DNA fragment
12.0	12.0	60.0	12.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	84.0	12.0
0.0	96.0	0.0	0.0
12.0	12.0	60.0	12.0

#ID = F3D14617
#Short = 2e42_AB
#Long = CCAAT/enhancer-binding protein beta
#W = 9
#Organisms = Homo sapiens
#Description = Crystal structure of C/EBPbeta Bzip homodimer V285A mutant bound to A High Affinity DNA fragment
32.0	13.0	38.0	13.0
9.0	9.0	9.0	69.0
2.0	9.0	0.0	85.0
15.0	9.0	56.0	16.0
4.0	84.0	5.0	3.0
0.0	1.0	80.0	15.0
8.0	77.0	4.0	7.0
72.0	0.0	19.0	5.0
73.0	9.0	7.0	7.0

#ID = F3D14618
#Short = 2e43_AB
#Long = CCAAT/enhancer-binding protein beta
#W = 8
#Organisms = Homo sapiens
#Description = Crystal structure of C/EBPbeta Bzip homodimer K269A mutant bound to A High Affinity DNA fragment
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
13.0	13.0	70.0	0.0
0.0	96.0	0.0	0.0
13.0	0.0	82.0	1.0
13.0	57.0	13.0	13.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14619
#Short = 2e43_B
#Long = CCAAT/enhancer-binding protein beta
#W = 4
#Organisms = Homo sapiens
#Description = Crystal structure of C/EBPbeta Bzip homodimer K269A mutant bound to A High Affinity DNA fragment
19.0	19.0	39.0	19.0
0.0	77.0	0.0	19.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14620
#Short = 2er8_CD
#Long = Regulatory protein LEU3
#W = 10
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Crystal Structure of Leu3 DNA-binding domain complexed with a 12mer DNA duplex
11.0	55.0	15.0	15.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
10.0	15.0	5.0	66.0
55.0	10.0	15.0	16.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	5.0	86.0	5.0

#ID = F3D14621
#Short = 2ere_AB
#Long = Regulatory protein LEU3
#W = 10
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Crystal Structure of a Leu3 DNA-binding domain complexed with a 15mer DNA duplex
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
13.0	13.0	54.0	16.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
16.0	54.0	13.0	13.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14622
#Short = 2f8x_C
#Long = Recombining binding protein suppressor of hairless
#W = 8
#Organisms = Homo sapiens
#Description = Crystal structure of activated Notch, CSL and MAML on HES-1 promoter DNA sequence
4.0	7.0	4.0	81.0
4.0	4.0	81.0	7.0
0.0	0.0	0.0	96.0
4.0	4.0	84.0	4.0
9.0	4.0	76.0	7.0
4.0	4.0	81.0	7.0
96.0	0.0	0.0	0.0
84.0	4.0	4.0	4.0

#ID = F3D14623
#Short = 2fio_A
#Long = Late genes activator
#W = 5
#Organisms = Bacillus phage phi29
#Description = Phage phi29 transcription regulator p4-DNA complex
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
16.0	13.0	13.0	54.0
16.0	13.0	54.0	13.0

#ID = F3D14624
#Short = 2fo1_A
#Long = Lin-12 and glp-1 phenotype protein 1, isoform b
#W = 7
#Organisms = Caenorhabditis elegans
#Description = Crystal Structure of the CSL-Notch-Mastermind ternary complex bound to DNA
9.0	11.0	9.0	67.0
0.0	0.0	0.0	96.0
11.0	67.0	9.0	9.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
9.0	69.0	9.0	9.0

#ID = F3D14625
#Short = 2gli_A
#Long = PROTEIN (FIVE-FINGER GLI)
#W = 14
#Organisms = Homo sapiens
#Description = FIVE-FINGER GLI/DNA COMPLEX
0.0	0.0	96.0	0.0
69.0	7.0	15.0	5.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
88.0	8.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	89.0	0.0	0.0
61.0	15.0	7.0	13.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	61.0	19.0	7.0
19.0	3.0	71.0	3.0

#ID = F3D14626
#Short = 2gzk_A
#Long = Sex-determining region on Y / HMGB1
#W = 16
#Organisms = Homo sapiens,Rattus rattus
#Description = Structure of a complex of tandem HMG boxes and DNA
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
13.0	13.0	16.0	54.0
54.0	13.0	13.0	16.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
13.0	48.0	20.0	15.0
0.0	96.0	0.0	0.0

#ID = F3D14627
#Short = 2h1k_B
#Long = Pancreatic and duodenal homeobox 1
#W = 7
#Organisms = Mesocricetus auratus
#Description = Crystal structure of the Pdx1 homeodomain in complex with DNA
8.0	72.0	8.0	8.0
0.0	8.0	8.0	80.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
72.0	8.0	8.0	8.0
72.0	8.0	8.0	8.0

#ID = F3D14628
#Short = 2h27_A
#Long = RNA polymerase Sigma E factor
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = Crystal Structure of Escherichia coli SigmaE Region 4 Bound to its-35 Element DNA
21.0	10.0	53.0	12.0
0.0	0.0	96.0	0.0
21.0	10.0	12.0	53.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	10.0	85.0	1.0

#ID = F3D14629
#Short = 2h7h_AB
#Long = Viral jun transforming protein
#W = 9
#Organisms = Avian sarcoma virus,strain 17
#Description = Crystal structure of the JUN BZIP homodimer complexed with AP-1 DNA
61.0	17.0	8.0	10.0
0.0	0.0	0.0	96.0
11.0	8.0	69.0	8.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
8.0	10.0	17.0	61.0

#ID = F3D14630
#Short = 2h7h_B
#Long = Viral jun transforming protein
#W = 6
#Organisms = Avian sarcoma virus,strain 17
#Description = Crystal structure of the JUN BZIP homodimer complexed with AP-1 DNA
67.0	9.0	11.0	9.0
0.0	0.0	0.0	96.0
11.0	9.0	67.0	9.0
96.0	0.0	0.0	0.0
11.0	67.0	9.0	9.0
0.0	0.0	0.0	96.0

#ID = F3D14631
#Short = 2h8r_B
#Long = Hepatocyte nuclear factor 1-beta
#W = 13
#Organisms = Homo sapiens
#Description = Hepatocyte Nuclear Factor 1b bound to DNA: MODY5 Gene Product
11.0	11.0	11.0	63.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
11.0	12.0	62.0	11.0
66.0	11.0	11.0	8.0
62.0	7.0	14.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
3.0	3.0	6.0	84.0
96.0	0.0	0.0	0.0

#ID = F3D14632
#Short = 2han_A
#Long = Protein ultraspiracle
#W = 6
#Organisms = Drosophila melanogaster
#Description = Structural basis of heterodimeric ecdysteroid receptor interaction with natural response element hsp27 gene promoter
24.0	12.0	12.0	48.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
12.0	48.0	12.0	24.0

#ID = F3D14633
#Short = 2han_AB
#Long = Protein ultraspiracle
#W = 12
#Organisms = Drosophila melanogaster
#Description = Structural basis of heterodimeric ecdysteroid receptor interaction with natural response element hsp27 gene promoter
0.0	0.0	96.0	0.0
0.0	6.0	21.0	69.0
12.0	5.0	74.0	5.0
24.0	24.0	24.0	24.0
64.0	10.0	12.0	10.0
24.0	24.0	24.0	24.0
6.0	0.0	10.0	80.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
5.0	69.0	12.0	10.0

#ID = F3D14634
#Short = 2hap_CD
#Long = PROTEIN (HEME ACTIVATOR PROTEIN)
#W = 12
#Organisms = Saccharomyces cerevisiae
#Description = STRUCTURE OF A HAP1-18/DNA COMPLEX REVEALS THAT PROTEIN/DNA INTERACTIONS CAN HAVE DIRECT ALLOSTERIC EFFECTS ON TRANSCRIPTIONAL ACTIVATION
6.0	80.0	10.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
16.0	10.0	17.0	53.0
24.0	24.0	24.0	24.0
17.0	10.0	16.0	53.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
5.0	85.0	6.0	0.0
0.0	0.0	96.0	0.0
5.0	86.0	0.0	5.0

#ID = F3D14635
#Short = 2hap_D
#Long = PROTEIN (HEME ACTIVATOR PROTEIN)
#W = 9
#Organisms = Saccharomyces cerevisiae
#Description = STRUCTURE OF A HAP1-18/DNA COMPLEX REVEALS THAT PROTEIN/DNA INTERACTIONS CAN HAVE DIRECT ALLOSTERIC EFFECTS ON TRANSCRIPTIONAL ACTIVATION
7.0	83.0	6.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
12.0	25.0	15.0	44.0
24.0	24.0	24.0	24.0
19.0	12.0	12.0	53.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	6.0	7.0	83.0

#ID = F3D14636
#Short = 2hdd_A
#Long = PROTEIN (ENGRAILED HOMEODOMAIN Q50K)
#W = 8
#Organisms = Drosophila melanogaster
#Description = ENGRAILED HOMEODOMAIN Q50K VARIANT DNA COMPLEX
9.0	11.0	9.0	67.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
67.0	9.0	9.0	11.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
9.0	67.0	9.0	11.0

#ID = F3D14637
#Short = 2hdd_AB
#Long = PROTEIN (ENGRAILED HOMEODOMAIN Q50K)
#W = 12
#Organisms = Drosophila melanogaster
#Description = ENGRAILED HOMEODOMAIN Q50K VARIANT DNA COMPLEX
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
8.0	61.0	17.0	10.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
61.0	8.0	19.0	8.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
8.0	69.0	11.0	8.0

#ID = F3D14638
#Short = 2hos_A
#Long = Segmentation polarity homeobox protein engrailed
#W = 6
#Organisms = Drosophila melanogaster
#Description = Phage-Selected Homeodomain Bound to Unmodified DNA
11.0	8.0	69.0	8.0
0.0	0.0	96.0	0.0
72.0	8.0	8.0	8.0
0.0	0.0	0.0	96.0
8.0	8.0	11.0	69.0
87.0	0.0	8.0	1.0

#ID = F3D14639
#Short = 2hos_AB
#Long = Segmentation polarity homeobox protein engrailed
#W = 11
#Organisms = Drosophila melanogaster
#Description = Phage-Selected Homeodomain Bound to Unmodified DNA
5.0	5.0	2.0	84.0
0.0	96.0	0.0	0.0
5.0	75.0	5.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
7.0	11.0	73.0	5.0
0.0	0.0	96.0	0.0
79.0	5.0	5.0	7.0
0.0	0.0	0.0	96.0
7.0	5.0	5.0	79.0
91.0	0.0	5.0	0.0

#ID = F3D14640
#Short = 2hot_AB
#Long = Segmentation polarity homeobox protein engrailed
#W = 10
#Organisms = Drosophila melanogaster
#Description = Phage selected homeodomain bound to modified DNA
0.0	96.0	0.0	0.0
11.0	55.0	14.0	16.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
11.0	15.0	59.0	11.0
0.0	0.0	96.0	0.0
87.0	3.0	3.0	3.0
0.0	0.0	0.0	96.0
6.0	3.0	3.0	84.0
84.0	3.0	3.0	6.0

#ID = F3D14641
#Short = 2hzv_ABCD
#Long = Nickel-responsive regulator
#W = 28
#Organisms = Escherichia coli (strain K12)
#Description = NikR-operator DNA complex
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
19.0	9.0	19.0	49.0
1.0	9.0	0.0	86.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
48.0	20.0	9.0	19.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14642
#Short = 2hzv_EFGH
#Long = Nickel-responsive regulator
#W = 29
#Organisms = Escherichia coli (strain K12)
#Description = NikR-operator DNA complex
54.0	13.0	13.0	16.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
16.0	54.0	13.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14643
#Short = 2i13_A
#Long = Aart
#W = 18
#Organisms = Mus musculus
#Description = Aart, a six finger zinc finger designed to recognize ANN triplets
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
11.0	8.0	69.0	8.0
8.0	8.0	69.0	11.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
87.0	9.0	0.0	0.0
0.0	96.0	0.0	0.0
69.0	11.0	8.0	8.0

#ID = F3D14644
#Short = 2irf_GH
#Long = INTERFERON REGULATORY FACTOR 2
#W = 9
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX.
16.0	54.0	13.0	13.0
13.0	22.0	13.0	48.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
13.0	54.0	16.0	13.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0

#ID = F3D14645
#Short = 2irf_IJKL
#Long = INTERFERON REGULATORY FACTOR 2
#W = 23
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX.
2.0	5.0	87.0	2.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
2.0	2.0	84.0	8.0
0.0	0.0	0.0	96.0
2.0	2.0	90.0	2.0
64.0	12.0	12.0	8.0
96.0	0.0	0.0	0.0
89.0	3.0	2.0	2.0
2.0	2.0	90.0	2.0
24.0	24.0	24.0	24.0
2.0	3.0	89.0	2.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
4.0	2.0	88.0	2.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
70.0	10.0	6.0	10.0
3.0	2.0	89.0	2.0

#ID = F3D14646
#Short = 2irf_L
#Long = INTERFERON REGULATORY FACTOR 2
#W = 5
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX.
10.0	10.0	74.0	2.0
10.0	10.0	12.0	64.0
0.0	0.0	96.0	0.0
12.0	10.0	10.0	64.0
96.0	0.0	0.0	0.0

#ID = F3D14647
#Short = 2isz_ABCD
#Long = Iron-dependent repressor ideR
#W = 17
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = Crystal structure of a two-domain IdeR-DNA complex crystal form I
2.0	2.0	8.0	84.0
10.0	6.0	9.0	71.0
87.0	2.0	4.0	3.0
18.0	2.0	73.0	3.0
0.0	0.0	96.0	0.0
2.0	5.0	85.0	4.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	93.0	1.0	2.0
0.0	0.0	0.0	96.0
3.0	8.0	79.0	6.0
8.0	6.0	8.0	74.0
24.0	24.0	24.0	24.0
2.0	87.0	5.0	2.0
3.0	2.0	2.0	89.0

#ID = F3D14648
#Short = 2isz_B
#Long = Iron-dependent repressor ideR
#W = 6
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = Crystal structure of a two-domain IdeR-DNA complex crystal form I
6.0	6.0	9.0	75.0
6.0	6.0	6.0	78.0
78.0	6.0	6.0	6.0
6.0	6.0	75.0	9.0
0.0	0.0	96.0	0.0
1.0	6.0	89.0	0.0

#ID = F3D14649
#Short = 2it0_ABCD
#Long = Iron-dependent repressor ideR
#W = 15
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = Crystal structure of a two-domain IdeR-DNA complex crystal form II
79.0	7.0	5.0	5.0
5.0	5.0	79.0	7.0
0.0	0.0	96.0	0.0
5.0	7.0	79.0	5.0
24.0	24.0	24.0	24.0
79.0	5.0	7.0	5.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
5.0	90.0	1.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	81.0	5.0	5.0
0.0	0.0	0.0	96.0

#ID = F3D14650
#Short = 2jpa_A
#Long = Wilms tumor 1
#W = 13
#Organisms = Homo sapiens
#Description = Structure of the Wilms Tumor Suppressor Protein Zinc Finger Domain Bound to DNA
20.0	57.0	16.0	3.0
61.0	11.0	13.0	11.0
18.0	18.0	26.0	34.0
60.0	12.0	12.0	12.0
0.0	93.0	2.0	1.0
6.0	5.0	83.0	2.0
0.0	95.0	0.0	1.0
0.0	96.0	0.0	0.0
14.0	63.0	11.0	8.0
2.0	90.0	2.0	2.0
2.0	88.0	2.0	4.0
0.0	2.0	93.0	1.0
6.0	78.0	6.0	6.0

#ID = F3D14651
#Short = 2kei_AB
#Long = Lactose operon repressor
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
8.0	0.0	8.0	80.0
8.0	80.0	0.0	8.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	88.0	0.0	8.0
8.0	8.0	8.0	72.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
72.0	8.0	8.0	8.0

#ID = F3D14652
#Short = 2kei_B
#Long = Lactose operon repressor
#W = 9
#Organisms = Escherichia coli (strain K12)
#Description = Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
7.0	5.0	5.0	79.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
7.0	5.0	5.0	79.0
75.0	11.0	5.0	5.0
5.0	75.0	11.0	5.0
5.0	7.0	79.0	5.0

#ID = F3D14653
#Short = 2kej_AB
#Long = Lactose operon repressor
#W = 15
#Organisms = Escherichia coli (strain K12)
#Description = Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O2
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
60.0	12.0	12.0	12.0
0.0	84.0	0.0	12.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
12.0	60.0	12.0	12.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14654
#Short = 2kej_B
#Long = Lactose operon repressor
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O2
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
60.0	12.0	12.0	12.0
0.0	84.0	0.0	12.0
0.0	0.0	0.0	96.0
12.0	60.0	12.0	12.0

#ID = F3D14655
#Short = 2kek_AB
#Long = Lactose operon repressor
#W = 12
#Organisms = Escherichia coli (strain K12)
#Description = Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O3
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	16.0	8.0	67.0
13.0	5.0	73.0	5.0
5.0	86.0	0.0	5.0
0.0	0.0	96.0	0.0
0.0	90.0	1.0	5.0
0.0	5.0	7.0	84.0
0.0	90.0	1.0	5.0
96.0	0.0	0.0	0.0
11.0	79.0	5.0	1.0

#ID = F3D14656
#Short = 2kek_B
#Long = Lactose operon repressor
#W = 10
#Organisms = Escherichia coli (strain K12)
#Description = Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O3
7.0	9.0	7.0	73.0
24.0	24.0	24.0	24.0
9.0	7.0	73.0	7.0
9.0	73.0	7.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
7.0	7.0	7.0	75.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14657
#Short = 2kmk_A
#Long = Zinc finger protein Gfi-1
#W = 10
#Organisms = Rattus norvegicus
#Description = Gfi-1 Zinc Fingers 3-5 complexed with DNA
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
7.0	66.0	9.0	14.0
96.0	0.0	0.0	0.0
14.0	14.0	7.0	61.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
59.0	16.0	14.0	7.0

#ID = F3D14658
#Short = 2ld5_A
#Long = Homeobox protein Hox-A13
#W = 9
#Organisms = Mus musculus
#Description = Solution NMR-derived complex structure of Hoxa13 DNA binding domain bound to DNA
70.0	6.0	14.0	6.0
6.0	12.0	6.0	72.0
1.0	6.0	19.0	70.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
6.0	6.0	8.0	76.0
6.0	0.0	1.0	89.0

#ID = F3D14659
#Short = 2lex_A
#Long = Probable WRKY transcription factor 4
#W = 6
#Organisms = Arabidopsis thaliana
#Description = Complex of the C-terminal WRKY domain of AtWRKY4 and a W-box DNA
7.0	7.0	73.0	9.0
7.0	7.0	7.0	75.0
24.0	24.0	24.0	24.0
75.0	7.0	7.0	7.0
24.0	24.0	24.0	24.0
75.0	7.0	7.0	7.0

#ID = F3D14660
#Short = 2lkx_A
#Long = Pituitary homeobox 3
#W = 7
#Organisms = Homo sapiens
#Description = NMR structure of the homeodomain of Pitx2 in complex with a TAATCC DNA binding site
0.0	0.0	96.0	0.0
10.0	10.0	64.0	12.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
12.0	10.0	0.0	74.0
85.0	0.0	10.0	1.0
10.0	12.0	74.0	0.0

#ID = F3D14661
#Short = 2me6_A
#Long = Homeobox protein GBX-1
#W = 9
#Organisms = Homo sapiens
#Description = NMR Structure of the homeodomain transcription factor Gbx1 from Homo sapiens in complex with the DNA sequence CGACTAATTAGTCG
57.0	13.0	13.0	13.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
13.0	16.0	54.0	13.0

#ID = F3D14662
#Short = 2nll_AB
#Long = PROTEIN (RETINOIC ACID RECEPTOR)
#W = 15
#Organisms = Homo sapiens
#Description = RETINOID X RECEPTOR-THYROID HORMONE RECEPTOR DNA-BINDING DOMAIN HETERODIMER BOUND TO THYROID RESPONSE ELEMENT DNA
4.0	9.0	14.0	69.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
12.0	28.0	4.0	52.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	1.0	4.0	91.0
24.0	24.0	24.0	24.0
48.0	9.0	28.0	11.0
14.0	82.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14663
#Short = 2nll_B
#Long = PROTEIN (THYROID HORMONE RECEPTOR)
#W = 5
#Organisms = Homo sapiens
#Description = RETINOID X RECEPTOR-THYROID HORMONE RECEPTOR DNA-BINDING DOMAIN HETERODIMER BOUND TO THYROID RESPONSE ELEMENT DNA
19.0	20.0	19.0	38.0
7.0	8.0	71.0	10.0
66.0	11.0	12.0	7.0
0.0	95.0	0.0	1.0
5.0	78.0	6.0	7.0

#ID = F3D14664
#Short = 2nny_AB
#Long = C-ets-1 protein
#W = 14
#Organisms = Homo sapiens
#Description = Crystal structure of the Ets1 dimer DNA complex.
80.0	6.0	5.0	5.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
80.0	5.0	5.0	6.0
6.0	5.0	80.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	75.0	11.0	5.0
6.0	10.0	5.0	75.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
5.0	1.0	5.0	85.0

#ID = F3D14665
#Short = 2nny_B
#Long = C-ets-1 protein
#W = 6
#Organisms = Homo sapiens
#Description = Crystal structure of the Ets1 dimer DNA complex.
67.0	9.0	9.0	11.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
67.0	9.0	9.0	11.0
9.0	9.0	69.0	9.0

#ID = F3D14666
#Short = 2o61_AB
#Long = Transcription factor p65/Interferon regulatory fac
#W = 26
#Organisms = Homo sapiens
#Description = Crystal Structure of NFkB, IRF7, IRF3 bound to the interferon-b enhancer
5.0	5.0	78.0	8.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
89.0	5.0	1.0	1.0
24.0	24.0	24.0	24.0
5.0	5.0	8.0	78.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
85.0	3.0	3.0	5.0
5.0	71.0	11.0	9.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
3.0	1.0	4.0	88.0
24.0	24.0	24.0	24.0
90.0	1.0	4.0	1.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
11.0	11.0	11.0	63.0
0.0	96.0	0.0	0.0
0.0	1.0	1.0	94.0
5.0	82.0	3.0	6.0
0.0	96.0	0.0	0.0

#ID = F3D14667
#Short = 2o61_B
#Long = Nuclear factor NF-kappa-B p105 subunit
#W = 5
#Organisms = Homo sapiens
#Description = Crystal Structure of NFkB, IRF7, IRF3 bound to the interferon-b enhancer
12.0	11.0	12.0	61.0
2.0	92.0	1.0	1.0
0.0	96.0	0.0	0.0
5.0	81.0	7.0	3.0
39.0	19.0	19.0	19.0

#ID = F3D14668
#Short = 2o6g_E
#Long = Interferon regulatory factor 3
#W = 9
#Organisms = Homo sapiens
#Description = Crystal structure of IRF-3 bound to the interferon-b enhancer
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
17.0	54.0	17.0	8.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
43.0	17.0	19.0	17.0
0.0	10.0	8.0	78.0

#ID = F3D14669
#Short = 2o6g_EFGH
#Long = Interferon regulatory factor 3
#W = 22
#Organisms = Homo sapiens
#Description = Crystal structure of IRF-3 bound to the interferon-b enhancer
1.0	4.0	1.0	90.0
7.0	11.0	6.0	72.0
24.0	24.0	24.0	24.0
84.0	4.0	3.0	5.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
3.0	83.0	7.0	3.0
37.0	3.0	1.0	55.0
0.0	13.0	0.0	83.0
6.0	1.0	1.0	88.0
0.0	96.0	0.0	0.0
78.0	10.0	5.0	3.0
24.0	24.0	24.0	24.0
0.0	0.0	2.0	94.0
1.0	44.0	0.0	51.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14670
#Short = 2o93_LMO
#Long = actor of activated T-cells, cytoplasmic 2
#W = 24
#Organisms = Homo sapiens
#Description = Crystal structure of NFAT bound to the HIV-1 LTR tandem kappaB enhancer element
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
73.0	9.0	7.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	7.0	7.0	73.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
9.0	7.0	73.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	7.0	7.0	73.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14671
#Short = 2o93_M
#Long = actor of activated T-cells, cytoplasmic 2
#W = 5
#Organisms = Homo sapiens
#Description = Crystal structure of NFAT bound to the HIV-1 LTR tandem kappaB enhancer element
13.0	13.0	16.0	54.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
16.0	13.0	54.0	13.0

#ID = F3D14672
#Short = 2or1_L
#Long = 434 REPRESSOR
#W = 9
#Organisms = Enterobacteria phage lambda,Phage 434
#Description = RECOGNITION OF A DNA OPERATOR BY THE REPRESSOR OF PHAGE 434. A VIEW AT HIGH RESOLUTION
6.0	6.0	6.0	78.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
24.0	24.0	24.0	24.0
6.0	6.0	16.0	68.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
75.0	6.0	6.0	9.0

#ID = F3D14673
#Short = 2or1_LR
#Long = 434 REPRESSOR
#W = 16
#Organisms = Enterobacteria phage lambda,Phage 434
#Description = RECOGNITION OF A DNA OPERATOR BY THE REPRESSOR OF PHAGE 434. A VIEW AT HIGH RESOLUTION
5.0	5.0	5.0	81.0
80.0	5.0	6.0	5.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	6.0	5.0	80.0
24.0	24.0	24.0	24.0
5.0	5.0	5.0	81.0
24.0	24.0	24.0	24.0
5.0	5.0	6.0	80.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
80.0	5.0	5.0	6.0

#ID = F3D14674
#Short = 2p5l_D
#Long = Arginine repressor
#W = 6
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of a dimer of N-terminal domains of AhrC in complex with an 18bp DNA operator site
67.0	9.0	11.0	9.0
96.0	0.0	0.0	0.0
9.0	9.0	9.0	69.0
9.0	11.0	9.0	67.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14675
#Short = 2p5l_DH
#Long = Arginine repressor
#W = 15
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of a dimer of N-terminal domains of AhrC in complex with an 18bp DNA operator site
86.0	6.0	0.0	4.0
96.0	0.0	0.0	0.0
9.0	9.0	9.0	69.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	13.0	9.0	65.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
86.0	4.0	6.0	0.0
73.0	10.0	9.0	4.0
0.0	0.0	0.0	96.0
6.0	4.0	4.0	82.0

#ID = F3D14676
#Short = 2pe5_AB
#Long = Lactose operon repressor
#W = 13
#Organisms = Escherichia coli (strain K12)
#Description = Crystal Structure of the Lac Repressor bound to ONPG in repressed state
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
72.0	8.0	8.0	8.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
8.0	0.0	88.0	0.0
8.0	64.0	8.0	16.0
8.0	8.0	16.0	64.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14677
#Short = 2pe5_B
#Long = Lactose operon repressor
#W = 9
#Organisms = Escherichia coli (strain K12)
#Description = Crystal Structure of the Lac Repressor bound to ONPG in repressed state
9.0	69.0	9.0	9.0
0.0	0.0	96.0	0.0
9.0	69.0	9.0	9.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
69.0	9.0	9.0	9.0

#ID = F3D14678
#Short = 2pi0_ABCD
#Long = Interferon regulatory factor 3
#W = 26
#Organisms = Homo sapiens
#Description = Crystal Structure of IRF-3 bound to the PRDIII-I regulatory element of the human interferon-B enhancer
0.0	96.0	0.0	0.0
1.0	1.0	0.0	94.0
0.0	0.0	0.0	96.0
0.0	11.0	1.0	84.0
24.0	24.0	24.0	24.0
88.0	3.0	3.0	2.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
19.0	15.0	11.0	51.0
1.0	94.0	0.0	1.0
7.0	5.0	12.0	72.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	71.0	1.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
1.0	0.0	1.0	94.0
0.0	96.0	0.0	0.0
86.0	1.0	4.0	5.0
0.0	0.0	88.0	8.0
0.0	1.0	1.0	94.0
0.0	0.0	0.0	96.0
0.0	2.0	0.0	94.0
24.0	24.0	24.0	24.0
3.0	84.0	6.0	3.0
0.0	96.0	0.0	0.0

#ID = F3D14679
#Short = 2prt_A
#Long = Wilms tumor 1
#W = 10
#Organisms = Homo sapiens
#Description = Structure of the Wilms Tumor Suppressor Protein Zinc Finger Domain Bound to DNA
54.0	13.0	13.0	16.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
13.0	82.0	1.0	0.0
0.0	96.0	0.0	0.0
13.0	15.0	68.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14680
#Short = 2pua_A
#Long = PURINE REPRESSOR
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
57.0	13.0	13.0	13.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
13.0	13.0	57.0	13.0

#ID = F3D14681
#Short = 2puf_A
#Long = PROTEIN (PURINE REPRESSOR)
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
54.0	13.0	13.0	16.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
16.0	13.0	54.0	13.0

#ID = F3D14682
#Short = 2ql2_AB
#Long = Transcription factor E2-alpha
#W = 8
#Organisms = Mus musculus
#Description = Crystal Structure of the basic-helix-loop-helix domains of the heterodimer E47/NeuroD1 bound to DNA
13.0	54.0	13.0	16.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
13.0	16.0	54.0	13.0

#ID = F3D14683
#Short = 2ql2_CD
#Long = Transcription factor E2-alpha
#W = 8
#Organisms = Mus musculus
#Description = Crystal Structure of the basic-helix-loop-helix domains of the heterodimer E47/NeuroD1 bound to DNA
6.0	75.0	6.0	9.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
6.0	16.0	68.0	6.0
24.0	24.0	24.0	24.0
13.0	6.0	6.0	71.0
0.0	0.0	96.0	0.0
6.0	9.0	75.0	6.0

#ID = F3D14684
#Short = 2r1j_L
#Long = Repressor protein C2
#W = 5
#Organisms = Enterobacteria phage P22
#Description = Crystal Structure of the P22 c2 Repressor protein in complex with the synthetic operator 9T
11.0	9.0	9.0	67.0
9.0	9.0	9.0	69.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
11.0	9.0	67.0	9.0

#ID = F3D14685
#Short = 2r1j_LR
#Long = Repressor protein C2
#W = 14
#Organisms = Enterobacteria phage P22
#Description = Crystal Structure of the P22 c2 Repressor protein in complex with the synthetic operator 9T
5.0	5.0	5.0	81.0
5.0	5.0	6.0	80.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
6.0	5.0	80.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	80.0	6.0	5.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
80.0	6.0	5.0	5.0
81.0	5.0	5.0	5.0

#ID = F3D14686
#Short = 2r5z_A
#Long = Homeotic protein Sex combs reduced
#W = 8
#Organisms = Drosophila melanogaster
#Description = Structure of Scr/Exd complex bound to a DNA sequence derived from the fkh gene
2.0	62.0	18.0	14.0
1.0	93.0	0.0	2.0
0.0	1.0	2.0	93.0
39.0	4.0	51.0	2.0
0.0	0.0	0.0	96.0
2.0	2.0	4.0	88.0
53.0	18.0	11.0	14.0
73.0	16.0	0.0	7.0

#ID = F3D14687
#Short = 2r5z_AB
#Long = Homeotic protein Sex combs reduced
#W = 11
#Organisms = Drosophila melanogaster
#Description = Structure of Scr/Exd complex bound to a DNA sequence derived from the fkh gene
0.0	90.0	5.0	1.0
5.0	80.0	6.0	5.0
10.0	10.0	58.0	18.0
66.0	10.0	10.0	10.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
12.0	10.0	10.0	64.0

#ID = F3D14688
#Short = 2stt_A
#Long = ETS1
#W = 5
#Organisms = Homo sapiens
#Description = SOLUTION NMR STRUCTURE OF THE HUMAN ETS1/DNA COMPLEX, 25 STRUCTURES
13.0	13.0	13.0	57.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
13.0	13.0	57.0	13.0

#ID = F3D14689
#Short = 2v2t_B
#Long = NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT
#W = 5
#Organisms = Mus musculus
#Description = X-RAY STRUCTURE OF A NF-KB P50-RELB-DNA COMPLEX
13.0	13.0	13.0	57.0
0.0	0.0	0.0	96.0
16.0	54.0	13.0	13.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14690
#Short = 2vy1_A
#Long = PROTEIN LEAFY
#W = 9
#Organisms = Arabidopsis thaliana
#Description = Structure of LEAFY transcription factor from Arabidopsis thaliana in complex with DNA from AP1 promoter
11.0	9.0	9.0	67.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	9.0	9.0	69.0
67.0	11.0	9.0	9.0

#ID = F3D14691
#Short = 2vy2_A
#Long = PROTEIN LEAFY
#W = 9
#Organisms = Arabidopsis thaliana
#Description = Structure of LEAFY transcription factor from Arabidopsis thaliana in complex with DNA from AG-I promoter
13.0	13.0	13.0	57.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
13.0	16.0	13.0	54.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0

#ID = F3D14692
#Short = 2wbs_A
#Long = KRUEPPEL-LIKE FACTOR 4
#W = 6
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF THE ZINC FINGER DOMAIN OF KLF4 BOUND TO ITS TARGET DNA
46.0	1.0	46.0	3.0
1.0	0.0	95.0	0.0
0.0	0.0	96.0	0.0
2.0	80.0	3.0	11.0
4.0	4.0	85.0	3.0
6.0	60.0	5.0	25.0

#ID = F3D14693
#Short = 2wbu_A
#Long = KRUEPPEL-LIKE FACTOR 4
#W = 10
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF THE ZINC FINGER DOMAIN OF KLF4 BOUND TO ITS TARGET DNA
8.0	17.0	63.0	8.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
87.0	0.0	0.0	9.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
1.0	69.0	0.0	26.0
19.0	61.0	8.0	8.0

#ID = F3D14694
#Short = 2wt7_A
#Long = PROTO-ONCOGENE PROTEIN C-FOS
#W = 4
#Organisms = Mus musculus
#Description = Crystal structure of the bZIP heterodimeric complex MafB:cFos bound to DNA
8.0	8.0	8.0	72.0
5.0	4.0	82.0	5.0
63.0	10.0	12.0	11.0
19.0	19.0	41.0	17.0

#ID = F3D14695
#Short = 2wt7_AB
#Long = PROTO-ONCOGENE PROTEIN C-FOS
#W = 10
#Organisms = Mus musculus
#Description = Crystal structure of the bZIP heterodimeric complex MafB:cFos bound to DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
54.0	16.0	13.0	13.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
54.0	13.0	16.0	13.0

#ID = F3D14696
#Short = 2wt7_B
#Long = TRANSCRIPTION FACTOR MAFB
#W = 8
#Organisms = Mus musculus
#Description = Crystal structure of the bZIP heterodimeric complex MafB:cFos bound to DNA
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
54.0	16.0	13.0	13.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
54.0	13.0	16.0	13.0

#ID = F3D14697
#Short = 2wty_AB
#Long = TRANSCRIPTION FACTOR MAFB
#W = 13
#Organisms = Mus musculus
#Description = Crystal structure of the homodimeric MafB in complex with the T-MARE binding site
0.0	8.0	0.0	88.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
11.0	8.0	8.0	69.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
11.0	8.0	69.0	8.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
69.0	8.0	11.0	8.0

#ID = F3D14698
#Short = 2wty_B
#Long = TRANSCRIPTION FACTOR MAFB
#W = 7
#Organisms = Mus musculus
#Description = Crystal structure of the homodimeric MafB in complex with the T-MARE binding site
9.0	11.0	67.0	9.0
9.0	11.0	9.0	67.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
67.0	11.0	9.0	9.0

#ID = F3D14699
#Short = 2xro_ABEF
#Long = HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGV
#W = 35
#Organisms = Pseudomonas putida (strain DOT-T1E)
#Description = CRYSTAL STRUCTURE OF TTGV IN COMPLEX WITH ITS DNA OPERATOR
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
11.0	9.0	7.0	69.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
3.0	84.0	3.0	6.0
10.0	7.0	7.0	72.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
75.0	7.0	7.0	7.0
3.0	84.0	6.0	3.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
87.0	3.0	3.0	3.0
24.0	24.0	24.0	24.0
3.0	5.0	0.0	88.0

#ID = F3D14700
#Short = 2xro_E
#Long = HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGV
#W = 5
#Organisms = Pseudomonas putida (strain DOT-T1E)
#Description = CRYSTAL STRUCTURE OF TTGV IN COMPLEX WITH ITS DNA OPERATOR
0.0	0.0	0.0	96.0
54.0	13.0	16.0	13.0
16.0	54.0	13.0	13.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14701
#Short = 2xsd_C
#Long = POU DOMAIN, CLASS 3, TRANSCRIPTION FACTOR 1
#W = 9
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF THE DIMERIC OCT-6 (POU3F1) POU DOMAIN BOUND TO PALINDROMIC MORE DNA
96.0	0.0	0.0	0.0
7.0	9.0	7.0	73.0
7.0	9.0	73.0	7.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
7.0	1.0	81.0	7.0
24.0	24.0	24.0	24.0
7.0	7.0	66.0	16.0

#ID = F3D14702
#Short = 2ypb_AB
#Long = T-CELL ACUTE LYMPHOCYTIC LEUKEMIA PROTEIN 1
#W = 9
#Organisms = Homo sapiens
#Description = Structure of the SCL:E47 complex bound to DNA
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
54.0	13.0	13.0	16.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
54.0	16.0	13.0	13.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0

#ID = F3D14703
#Short = 2z33_A
#Long = Phosphate regulon transcriptional regulatory prote
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = Solution structure of the DNA complex of PhoB DNA-binding/transactivation Domain
16.0	13.0	13.0	54.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
57.0	13.0	13.0	13.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14704
#Short = 3a01_AB
#Long = Homeodomain-containing protein
#W = 10
#Organisms = Drosophila melanogaster
#Description = Crystal structure of Aristaless and Clawless homeodomains bound to DNA
0.0	85.0	5.0	6.0
80.0	5.0	6.0	5.0
76.0	5.0	5.0	10.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
85.0	1.0	5.0	5.0
75.0	5.0	11.0	5.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
75.0	5.0	10.0	6.0

#ID = F3D14705
#Short = 3a01_E
#Long = Homeodomain-containing protein
#W = 6
#Organisms = Drosophila melanogaster
#Description = Crystal structure of Aristaless and Clawless homeodomains bound to DNA
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
19.0	19.0	20.0	38.0
76.0	0.0	20.0	0.0

#ID = F3D14706
#Short = 3a5t_AB
#Long = Transcription factor MafG
#W = 13
#Organisms = Mus musculus
#Description = Crystal structure of MafG-DNA complex
3.0	3.0	6.0	84.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	11.0	7.0	78.0
88.0	3.0	2.0	3.0
96.0	0.0	0.0	0.0
3.0	87.0	3.0	3.0
0.0	0.0	0.0	96.0
3.0	11.0	5.0	77.0
70.0	3.0	11.0	12.0
0.0	0.0	3.0	93.0
0.0	96.0	0.0	0.0
81.0	0.0	3.0	12.0

#ID = F3D14707
#Short = 3a5t_B
#Long = Transcription factor MafG
#W = 8
#Organisms = Mus musculus
#Description = Crystal structure of MafG-DNA complex
10.0	10.0	13.0	63.0
0.0	0.0	96.0	0.0
4.0	88.0	2.0	2.0
16.0	14.0	14.0	52.0
22.0	22.0	27.0	25.0
30.0	22.0	22.0	22.0
20.0	34.0	20.0	22.0
19.0	20.0	19.0	38.0

#ID = F3D14708
#Short = 3bdn_AB
#Long = Lambda Repressor
#W = 10
#Organisms = Enterobacteria phage lambda
#Description = Crystal Structure of the Lambda Repressor
0.0	96.0	0.0	0.0
11.0	57.0	15.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
61.0	11.0	15.0	9.0
11.0	11.0	61.0	13.0
17.0	15.0	15.0	49.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14709
#Short = 3brd_A
#Long = Lin-12 and glp-1 phenotype protein 1, isoform a
#W = 5
#Organisms = Caenorhabditis elegans
#Description = CSL (Lag-1) bound to DNA with Lin-12 RAM peptide, P212121
10.0	10.0	12.0	64.0
0.0	96.0	0.0	0.0
10.0	64.0	10.0	12.0
0.0	96.0	0.0	0.0
74.0	2.0	10.0	10.0

#ID = F3D14710
#Short = 3brf_A
#Long = Lin-12 and glp-1 phenotype protein 1, isoform a
#W = 8
#Organisms = Caenorhabditis elegans
#Description = CSL (Lag-1) bound to DNA with Lin-12 RAM peptide, C2221
7.0	9.0	7.0	73.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
9.0	73.0	7.0	7.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
7.0	73.0	7.0	9.0
75.0	7.0	7.0	7.0

#ID = F3D14711
#Short = 3brg_C
#Long = Recombining binding protein suppressor of hairless
#W = 8
#Organisms = Mus musculus
#Description = CSL (RBP-Jk) bound to DNA
9.0	11.0	9.0	67.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
9.0	67.0	11.0	9.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
67.0	9.0	11.0	9.0

#ID = F3D14712
#Short = 3cbb_A
#Long = Hepatocyte Nuclear Factor 4-alpha, DNA binding dom
#W = 5
#Organisms = Homo sapiens
#Description = Crystal Structure of Hepatocyte Nuclear Factor 4alpha in complex with DNA: Diabetes Gene Product
8.0	8.0	8.0	72.0
0.0	0.0	96.0	0.0
8.0	11.0	69.0	8.0
69.0	11.0	8.0	8.0
8.0	88.0	0.0	0.0

#ID = F3D14713
#Short = 3cbb_AB
#Long = Hepatocyte Nuclear Factor 4-alpha, DNA binding dom
#W = 12
#Organisms = Homo sapiens
#Description = Crystal Structure of Hepatocyte Nuclear Factor 4alpha in complex with DNA: Diabetes Gene Product
6.0	3.0	3.0	84.0
0.0	0.0	96.0	0.0
66.0	13.0	14.0	3.0
73.0	6.0	14.0	3.0
0.0	96.0	0.0	0.0
3.0	73.0	3.0	17.0
24.0	24.0	24.0	24.0
3.0	3.0	3.0	87.0
0.0	0.0	96.0	0.0
3.0	3.0	84.0	6.0
92.0	0.0	4.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14714
#Short = 3clc_ABCD
#Long = Regulatory protein
#W = 33
#Organisms = Enterobacter sp,Enterobacter sp. RFL1396
#Description = Crystal Structure of the Restriction-Modification Controller Protein C.Esp1396I Tetramer in Complex with its Natural 35 Base-Pair Operator
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
1.0	3.0	4.0	88.0
24.0	24.0	24.0	24.0
32.0	0.0	64.0	0.0
93.0	1.0	1.0	1.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
26.0	0.0	67.0	3.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
90.0	3.0	1.0	2.0
0.0	96.0	0.0	0.0
86.0	1.0	5.0	4.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
63.0	13.0	15.0	5.0
0.0	1.0	15.0	80.0
0.0	0.0	0.0	96.0
13.0	77.0	3.0	3.0
94.0	0.0	2.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14715
#Short = 3cmy_A
#Long = Paired box protein Pax-3
#W = 6
#Organisms = Homo sapiens
#Description = Structure of a homeodomain in complex with DNA
7.0	7.0	75.0	7.0
75.0	7.0	7.0	7.0
0.0	0.0	0.0	96.0
7.0	0.0	7.0	82.0
89.0	0.0	7.0	0.0
9.0	7.0	7.0	73.0

#ID = F3D14716
#Short = 3co6_C
#Long = Forkhead box protein O1
#W = 6
#Organisms = Homo sapiens
#Description = Crystal Structure of FoxO1 DBD Bound to DBE1 DNA
9.0	9.0	11.0	67.0
9.0	11.0	67.0	9.0
11.0	9.0	9.0	67.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14717
#Short = 3co7_F
#Long = Forkhead box protein O1
#W = 6
#Organisms = Homo sapiens
#Description = Crystal Structure of FoxO1 DBD Bound to DBE2 DNA
0.0	0.0	0.0	96.0
13.0	13.0	57.0	13.0
13.0	16.0	13.0	54.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14718
#Short = 3coa_F
#Long = Forkhead box protein O1
#W = 6
#Organisms = Homo sapiens
#Description = Crystal Structure of FoxO1 DBD Bound to IRE DNA
12.0	12.0	12.0	60.0
6.0	30.0	54.0	6.0
0.0	6.0	6.0	84.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
6.0	12.0	6.0	72.0

#ID = F3D14719
#Short = 3cro_LR
#Long = PROTEIN (434 CRO)
#W = 16
#Organisms = Enterobacteria phage lambda,Phage 434
#Description = THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
38.0	22.0	14.0	22.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
14.0	22.0	22.0	38.0
0.0	1.0	22.0	73.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14720
#Short = 3cro_R
#Long = PROTEIN (434 CRO)
#W = 4
#Organisms = Enterobacteria phage lambda,Phage 434
#Description = THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
16.0	13.0	13.0	54.0
96.0	0.0	0.0	0.0
13.0	54.0	13.0	16.0
96.0	0.0	0.0	0.0

#ID = F3D14721
#Short = 3d1n_IK
#Long = POU domain, class 6, transcription factor 1
#W = 22
#Organisms = Homo sapiens
#Description = Structure of human Brn-5 transcription factor in complex with corticotrophin-releasing hormone gene promoter
94.0	1.0	1.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
61.0	3.0	11.0	21.0
24.0	24.0	24.0	24.0
14.0	0.0	0.0	82.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
55.0	1.0	40.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	1.0	1.0	94.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
71.0	0.0	1.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	14.0	17.0	65.0
13.0	3.0	9.0	71.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14722
#Short = 3d1n_M
#Long = POU domain, class 6, transcription factor 1
#W = 10
#Organisms = Homo sapiens
#Description = Structure of human Brn-5 transcription factor in complex with corticotrophin-releasing hormone gene promoter
66.0	9.0	7.0	14.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
23.0	7.0	7.0	59.0
96.0	0.0	0.0	0.0
1.0	7.0	0.0	88.0
66.0	7.0	16.0	7.0

#ID = F3D14723
#Short = 3d1n_MO
#Long = POU domain, class 6, transcription factor 1
#W = 22
#Organisms = Homo sapiens
#Description = Structure of human Brn-5 transcription factor in complex with corticotrophin-releasing hormone gene promoter
84.0	5.0	2.0	5.0
0.0	2.0	1.0	93.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
16.0	5.0	5.0	70.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
76.0	5.0	7.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	7.0	5.0	84.0
90.0	1.0	5.0	0.0
0.0	0.0	0.0	96.0
73.0	4.0	5.0	14.0
24.0	24.0	24.0	24.0
0.0	1.0	2.0	93.0
0.0	0.0	0.0	96.0
8.0	0.0	5.0	83.0
96.0	0.0	0.0	0.0
2.0	5.0	5.0	84.0

#ID = F3D14724
#Short = 3d6y_A
#Long = Multidrug-efflux transporter 1 regulator
#W = 4
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of R275E mutant of BMRR bound to DNA and berberine
9.0	69.0	9.0	9.0
9.0	69.0	9.0	9.0
11.0	67.0	9.0	9.0
0.0	0.0	0.0	96.0

#ID = F3D14725
#Short = 3d6z_A
#Long = Multidrug-efflux transporter 1 regulator
#W = 4
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of R275E mutant of BMRR bound to DNA and rhodamine
9.0	67.0	11.0	9.0
11.0	67.0	9.0	9.0
9.0	67.0	11.0	9.0
0.0	0.0	0.0	96.0

#ID = F3D14726
#Short = 3d70_A
#Long = BMR promoter DNA
#W = 4
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of E253A mutant of BMRR bound to 22-bp oligonucleotide
0.0	76.0	11.0	9.0
19.0	49.0	19.0	9.0
19.0	58.0	19.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14727
#Short = 3d71_A
#Long = Multidrug-efflux transporter 1 regulator
#W = 4
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of E253Q BMRR bound to 22 base pair promoter site
9.0	69.0	9.0	9.0
9.0	67.0	11.0	9.0
9.0	67.0	11.0	9.0
0.0	0.0	0.0	96.0

#ID = F3D14728
#Short = 3dfv_CD
#Long = Trans-acting T-cell-specific transcription factor
#W = 13
#Organisms = Mus musculus
#Description = Adjacent GATA DNA binding
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	13.0	27.0	56.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
27.0	43.0	13.0	13.0
96.0	0.0	0.0	0.0

#ID = F3D14729
#Short = 3dfv_D
#Long = Trans-acting T-cell-specific transcription factor
#W = 6
#Organisms = Mus musculus
#Description = Adjacent GATA DNA binding
67.0	11.0	9.0	9.0
9.0	11.0	67.0	9.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
69.0	9.0	9.0	9.0

#ID = F3D14730
#Short = 3dfx_AB
#Long = Trans-acting T-cell-specific transcription factor
#W = 13
#Organisms = Mus musculus
#Description = Opposite GATA DNA binding
67.0	11.0	9.0	9.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
9.0	11.0	67.0	9.0
67.0	9.0	9.0	11.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14731
#Short = 3dfx_B
#Long = Trans-acting T-cell-specific transcription factor
#W = 7
#Organisms = Mus musculus
#Description = Opposite GATA DNA binding
11.0	9.0	9.0	67.0
11.0	9.0	9.0	67.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
67.0	9.0	11.0	9.0

#ID = F3D14732
#Short = 3do7_A
#Long = Avian reticuloendotheliosis viral (V-rel) oncogene
#W = 4
#Organisms = Mus musculus
#Description = X-ray structure of a NF-kB p52/RelB/DNA complex
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
57.0	13.0	13.0	13.0
54.0	13.0	16.0	13.0

#ID = F3D14733
#Short = 3do7_AB
#Long = Avian reticuloendotheliosis viral (V-rel) oncogene
#W = 9
#Organisms = Mus musculus,Homo sapiens
#Description = X-ray structure of a NF-kB p52/RelB/DNA complex
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
80.0	8.0	0.0	8.0
61.0	10.0	8.0	17.0
24.0	24.0	24.0	24.0
17.0	17.0	8.0	54.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14734
#Short = 3dzu_AD
#Long = Retinoic acid receptor RXR-alpha
#W = 17
#Organisms = Homo sapiens
#Description = Intact PPAR gamma - RXR alpha Nuclear Receptor Complex on DNA bound with BVT.13, 9-cis Retinoic Acid and NCOA2 Peptide
3.0	5.0	3.0	85.0
0.0	0.0	96.0	0.0
65.0	13.0	12.0	6.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	12.0	10.0	61.0
24.0	24.0	24.0	24.0
89.0	4.0	3.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
10.0	12.0	6.0	68.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	11.0	10.0	75.0
0.0	0.0	0.0	96.0

#ID = F3D14735
#Short = 3dzu_D
#Long = Peroxisome proliferator-activated receptor gamma
#W = 11
#Organisms = Homo sapiens
#Description = Intact PPAR gamma - RXR alpha Nuclear Receptor Complex on DNA bound with BVT.13, 9-cis Retinoic Acid and NCOA2 Peptide
4.0	4.0	4.0	84.0
4.0	9.0	69.0	14.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	91.0	5.0	0.0
4.0	4.0	4.0	84.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	7.0	4.0	81.0
0.0	0.0	0.0	96.0
4.0	4.0	4.0	84.0

#ID = F3D14736
#Short = 3dzy_AD
#Long = Retinoic acid receptor RXR-alpha
#W = 18
#Organisms = Homo sapiens
#Description = Intact PPAR gamma - RXR alpha Nuclear Receptor Complex on DNA bound with Rosiglitazone, 9-cis Retinoic Acid and NCOA2 Peptide
4.0	4.0	7.0	81.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	4.0	7.0	81.0
0.0	0.0	96.0	0.0
76.0	4.0	9.0	7.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
6.0	9.0	9.0	72.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	7.0	4.0	81.0
4.0	7.0	4.0	81.0

#ID = F3D14737
#Short = 3dzy_D
#Long = Peroxisome proliferator-activated receptor gamma
#W = 11
#Organisms = Homo sapiens
#Description = Intact PPAR gamma - RXR alpha Nuclear Receptor Complex on DNA bound with Rosiglitazone, 9-cis Retinoic Acid and NCOA2 Peptide
11.0	2.0	2.0	81.0
0.0	0.0	96.0	0.0
76.0	14.0	4.0	2.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
16.0	14.0	21.0	45.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
14.0	4.0	22.0	56.0
2.0	2.0	2.0	90.0

#ID = F3D14738
#Short = 3e00_AD
#Long = Retinoic acid receptor RXR-alpha
#W = 18
#Organisms = Homo sapiens
#Description = Intact PPAR gamma - RXR alpha Nuclear Receptor Complex on DNA bound with GW9662, 9-cis Retinoic Acid and NCOA2 Peptide
3.0	7.0	7.0	79.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	0.0	5.0	88.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	11.0	7.0	71.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
7.0	19.0	17.0	53.0
3.0	9.0	10.0	74.0
7.0	7.0	7.0	75.0

#ID = F3D14739
#Short = 3e00_D
#Long = Peroxisome proliferator-activated receptor gamma
#W = 11
#Organisms = Homo sapiens
#Description = Intact PPAR gamma - RXR alpha Nuclear Receptor Complex on DNA bound with GW9662, 9-cis Retinoic Acid and NCOA2 Peptide
5.0	5.0	6.0	80.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
5.0	12.0	5.0	74.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	10.0	1.0	80.0
5.0	10.0	12.0	69.0
10.0	5.0	5.0	76.0

#ID = F3D14740
#Short = 3ere_D
#Long = Arginine repressor
#W = 6
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = Crystal structure of the arginine repressor protein from Mycobacterium tuberculosis in complex with the DNA operator
13.0	13.0	16.0	54.0
0.0	0.0	96.0	0.0
13.0	54.0	16.0	13.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14741
#Short = 3f27_D
#Long = Transcription factor SOX-17
#W = 6
#Organisms = Mus musculus
#Description = Structure of Sox17 Bound to DNA
20.0	19.0	19.0	38.0
76.0	0.0	19.0	1.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14742
#Short = 3fhz_AD
#Long = Arginine repressor
#W = 14
#Organisms = Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
#Description = Crystal structure of the arginine repressor from Mycobacterium tuberculosis bound with its DNA operator and co-repressor, L-arginine
10.0	10.0	12.0	64.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
92.0	0.0	3.0	1.0
0.0	0.0	0.0	96.0
92.0	3.0	0.0	1.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
14.0	10.0	60.0	12.0
96.0	0.0	0.0	0.0
10.0	7.0	8.0	71.0
9.0	3.0	10.0	74.0
24.0	71.0	1.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14743
#Short = 3fhz_BF
#Long = Arginine repressor
#W = 14
#Organisms = Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
#Description = Crystal structure of the arginine repressor from Mycobacterium tuberculosis bound with its DNA operator and co-repressor, L-arginine
6.0	5.0	3.0	82.0
0.0	0.0	96.0	0.0
56.0	30.0	5.0	5.0
90.0	4.0	1.0	1.0
0.0	0.0	0.0	96.0
7.0	76.0	5.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	3.0	2.0	90.0
96.0	0.0	0.0	0.0
9.0	5.0	11.0	71.0
3.0	5.0	25.0	63.0
0.0	96.0	0.0	0.0
89.0	1.0	3.0	3.0

#ID = F3D14744
#Short = 3fhz_CE
#Long = Arginine repressor
#W = 14
#Organisms = Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
#Description = Crystal structure of the arginine repressor from Mycobacterium tuberculosis bound with its DNA operator and co-repressor, L-arginine
0.0	5.0	1.0	90.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
6.0	0.0	0.0	90.0
5.0	75.0	11.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
10.0	5.0	6.0	75.0
96.0	0.0	0.0	0.0
10.0	10.0	5.0	71.0
11.0	5.0	30.0	50.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14745
#Short = 3fhz_E
#Long = Arginine repressor
#W = 6
#Organisms = Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
#Description = Crystal structure of the arginine repressor from Mycobacterium tuberculosis bound with its DNA operator and co-repressor, L-arginine
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
16.0	54.0	13.0	13.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
13.0	54.0	13.0	16.0

#ID = F3D14746
#Short = 3fyl_AB
#Long = Glucocorticoid receptor
#W = 13
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:CGT complex
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	13.0	13.0	57.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
54.0	13.0	16.0	13.0
0.0	96.0	0.0	0.0

#ID = F3D14747
#Short = 3fyl_B
#Long = Glucocorticoid receptor
#W = 6
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:CGT complex
11.0	67.0	9.0	9.0
9.0	9.0	69.0	9.0
24.0	24.0	24.0	24.0
67.0	9.0	11.0	9.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14748
#Short = 3g6p_A
#Long = Glucocorticoid receptor
#W = 5
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:FKBP5 complex, 18bp
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
13.0	13.0	13.0	57.0
13.0	54.0	16.0	13.0

#ID = F3D14749
#Short = 3g6p_AB
#Long = Glucocorticoid receptor
#W = 15
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:FKBP5 complex, 18bp
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
57.0	6.0	25.0	8.0
0.0	96.0	0.0	0.0
90.0	6.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
12.0	6.0	6.0	72.0
0.0	0.0	96.0	0.0
6.0	6.0	12.0	72.0
24.0	24.0	24.0	24.0
7.0	83.0	0.0	6.0

#ID = F3D14750
#Short = 3g6q_AB
#Long = Glucocorticoid receptor
#W = 13
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:FKBP5 binding site complex-9
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
61.0	17.0	10.0	8.0
0.0	96.0	0.0	0.0
78.0	8.0	10.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
17.0	10.0	8.0	61.0
24.0	24.0	24.0	24.0
0.0	87.0	0.0	9.0

#ID = F3D14751
#Short = 3g6q_B
#Long = Glucocorticoid receptor
#W = 6
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:FKBP5 binding site complex-9
67.0	9.0	11.0	9.0
9.0	9.0	67.0	11.0
24.0	24.0	24.0	24.0
67.0	9.0	11.0	9.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14752
#Short = 3g6t_A
#Long = Glucocorticoid receptor
#W = 5
#Organisms = Rattus norvegicus
#Description = GR gamma DNA-binding domain:FKBP5 16bp complex-34
13.0	16.0	54.0	13.0
24.0	24.0	24.0	24.0
54.0	13.0	16.0	13.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14753
#Short = 3g6t_AB
#Long = Glucocorticoid receptor
#W = 11
#Organisms = Rattus norvegicus
#Description = GR gamma DNA-binding domain:FKBP5 16bp complex-34
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
68.0	9.0	13.0	6.0
0.0	96.0	0.0	0.0
75.0	6.0	6.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
6.0	9.0	6.0	75.0

#ID = F3D14754
#Short = 3g6u_AB
#Long = Glucocorticoid receptor
#W = 13
#Organisms = Rattus norvegicus
#Description = GR DNA-binding domain:FKBP5 16bp complex-49
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
61.0	13.0	9.0	13.0
0.0	96.0	0.0	0.0
82.0	6.0	6.0	2.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	9.0	6.0	75.0
0.0	0.0	96.0	0.0
6.0	6.0	13.0	71.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0

#ID = F3D14755
#Short = 3g6u_B
#Long = Glucocorticoid receptor
#W = 6
#Organisms = Rattus norvegicus
#Description = GR DNA-binding domain:FKBP5 16bp complex-49
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
11.0	9.0	9.0	67.0
24.0	24.0	24.0	24.0
9.0	69.0	9.0	9.0
9.0	9.0	9.0	69.0

#ID = F3D14756
#Short = 3g73_A
#Long = Forkhead box protein M1
#W = 6
#Organisms = Homo sapiens
#Description = Structure of the FOXM1 DNA binding
8.0	16.0	16.0	56.0
8.0	8.0	64.0	16.0
8.0	16.0	0.0	72.0
0.0	0.0	0.0	96.0
0.0	8.0	0.0	88.0
96.0	0.0	0.0	0.0

#ID = F3D14757
#Short = 3g73_AB
#Long = Forkhead box protein M1
#W = 12
#Organisms = Homo sapiens
#Description = Structure of the FOXM1 DNA binding
5.0	2.0	2.0	87.0
2.0	2.0	76.0	16.0
2.0	16.0	4.0	74.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	2.0	4.0	90.0
87.0	2.0	2.0	5.0
96.0	0.0	0.0	0.0
65.0	16.0	5.0	10.0
5.0	68.0	13.0	10.0
92.0	2.0	2.0	0.0

#ID = F3D14758
#Short = 3g8x_AB
#Long = Glucocorticoid receptor
#W = 14
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:GilZ 16bp complex-65
9.0	0.0	87.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
69.0	11.0	8.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	8.0	69.0	11.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
69.0	8.0	11.0	8.0

#ID = F3D14759
#Short = 3g97_AB
#Long = Glucocorticoid receptor
#W = 13
#Organisms = Rattus norvegicus
#Description = GR DNA-binding domain:GilZ 16bp complex-9
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
67.0	9.0	9.0	11.0
0.0	96.0	0.0	0.0
67.0	9.0	11.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	11.0	67.0	9.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0

#ID = F3D14760
#Short = 3g99_B
#Long = Glucocorticoid receptor
#W = 6
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:Pal complex-9
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
11.0	9.0	9.0	67.0
24.0	24.0	24.0	24.0
9.0	67.0	11.0	9.0
9.0	11.0	9.0	67.0

#ID = F3D14761
#Short = 3g9i_AB
#Long = Glucocorticoid receptor
#W = 13
#Organisms = Rattus norvegicus
#Description = GR DNA Binding domain: Pal complex-35
17.0	11.0	56.0	12.0
25.0	24.0	21.0	26.0
31.0	21.0	23.0	21.0
3.0	84.0	3.0	6.0
54.0	15.0	13.0	14.0
24.0	24.0	24.0	24.0
24.0	22.0	26.0	24.0
24.0	24.0	24.0	24.0
13.0	13.0	16.0	54.0
4.0	3.0	86.0	3.0
9.0	13.0	11.0	63.0
21.0	22.0	18.0	35.0
11.0	58.0	12.0	15.0

#ID = F3D14762
#Short = 3g9i_B
#Long = Glucocorticoid receptor
#W = 5
#Organisms = Rattus norvegicus
#Description = GR DNA Binding domain: Pal complex-35
13.0	13.0	13.0	57.0
5.0	3.0	84.0	4.0
9.0	13.0	11.0	63.0
21.0	22.0	18.0	35.0
11.0	57.0	11.0	17.0

#ID = F3D14763
#Short = 3g9m_AB
#Long = Glucocorticoid receptor
#W = 13
#Organisms = Rattus norvegicus
#Description = GR DNA-binding domain:Sgk 16bp complex-44
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
76.0	1.0	19.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
20.0	38.0	19.0	19.0
0.0	96.0	0.0	0.0

#ID = F3D14764
#Short = 3g9o_A
#Long = Glucocorticoid receptor
#W = 5
#Organisms = Rattus norvegicus
#Description = GR DNA-binding domain:Sgk 16bp complex-9
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
13.0	13.0	16.0	54.0
24.0	24.0	24.0	24.0
13.0	54.0	13.0	16.0

#ID = F3D14765
#Short = 3g9o_AB
#Long = Glucocorticoid receptor
#W = 13
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:Sgk 16bp complex-7
6.0	12.0	60.0	18.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
12.0	24.0	12.0	48.0
18.0	18.0	12.0	48.0
6.0	90.0	0.0	0.0

#ID = F3D14766
#Short = 3gat_A
#Long = ERYTHROID TRANSCRIPTION FACTOR GATA-1
#W = 5
#Organisms = Gallus gallus
#Description = SOLUTION NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF CHICKEN GATA-1 BOUND TO DNA, 34 STRUCTURES
16.0	13.0	13.0	54.0
96.0	0.0	0.0	0.0
13.0	13.0	16.0	54.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14767
#Short = 3gut_CF
#Long = Transcription factor p65
#W = 11
#Organisms = Homo sapiens
#Description = Crystal structure of a higher-order complex of p50:RelA bound to the HIV-1 LTR
8.0	6.0	76.0	6.0
0.0	13.0	0.0	83.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
89.0	6.0	1.0	0.0
24.0	24.0	24.0	24.0
6.0	12.0	6.0	72.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
76.0	6.0	6.0	8.0
84.0	6.0	0.0	6.0

#ID = F3D14768
#Short = 3gut_E
#Long = Transcription factor p65
#W = 4
#Organisms = Homo sapiens
#Description = Crystal structure of a higher-order complex of p50:RelA bound to the HIV-1 LTR
11.0	9.0	67.0	9.0
9.0	9.0	69.0	9.0
96.0	0.0	0.0	0.0
67.0	9.0	9.0	11.0

#ID = F3D14769
#Short = 3gut_EGH
#Long = Transcription factor p65
#W = 19
#Organisms = Homo sapiens
#Description = Crystal structure of a higher-order complex of p50:RelA bound to the HIV-1 LTR
13.0	13.0	16.0	54.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	54.0	13.0	16.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14770
#Short = 3hdd_AB
#Long = ENGRAILED HOMEODOMAIN
#W = 11
#Organisms = Drosophila melanogaster
#Description = ENGRAILED HOMEODOMAIN DNA COMPLEX
0.0	5.0	0.0	91.0
80.0	5.0	6.0	5.0
80.0	5.0	5.0	6.0
24.0	24.0	24.0	24.0
10.0	5.0	75.0	6.0
0.0	0.0	0.0	96.0
10.0	6.0	5.0	75.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
5.0	11.0	5.0	75.0
96.0	0.0	0.0	0.0

#ID = F3D14771
#Short = 3igm_A
#Long = PF14_0633 protein
#W = 7
#Organisms = isolate 3D7,Plasmodium falciparum
#Description = A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA
12.0	12.0	12.0	60.0
0.0	0.0	96.0	0.0
0.0	84.0	0.0	12.0
60.0	12.0	12.0	12.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14772
#Short = 3ikt_AB
#Long = Redox-sensing transcriptional repressor rex
#W = 18
#Organisms = strain HB27 / ATCC BAA-163 / DSM 7039,Thermus thermophilus
#Description = Crystal structure of a Rex-family repressor/DNA/NAD+ complex from Thermus aquaticus
13.0	13.0	58.0	12.0
4.0	74.0	16.0	2.0
2.0	4.0	2.0	88.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
76.0	2.0	16.0	2.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
2.0	13.0	4.0	77.0
0.0	96.0	0.0	0.0
88.0	2.0	2.0	4.0
0.0	96.0	0.0	0.0
88.0	2.0	2.0	4.0

#ID = F3D14773
#Short = 3ikt_B
#Long = Redox-sensing transcriptional repressor rex
#W = 7
#Organisms = strain HB27 / ATCC BAA-163 / DSM 7039,Thermus thermophilus
#Description = Crystal structure of a Rex-family repressor/DNA/NAD+ complex from Thermus aquaticus
13.0	16.0	54.0	13.0
13.0	54.0	16.0	13.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14774
#Short = 3il2_AB
#Long = Redox-sensing transcriptional repressor rex
#W = 17
#Organisms = strain HB27 / ATCC BAA-163 / DSM 7039,Thermus thermophilus
#Description = Crystal structure of a Rex-family repressor R90D mutant/DNA complex from Thermus aquaticus
16.0	13.0	54.0	13.0
13.0	54.0	16.0	13.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0

#ID = F3D14775
#Short = 3il2_B
#Long = Redox-sensing transcriptional repressor rex
#W = 6
#Organisms = strain HB27 / ATCC BAA-163 / DSM 7039,Thermus thermophilus
#Description = Crystal structure of a Rex-family repressor R90D mutant/DNA complex from Thermus aquaticus
13.0	16.0	54.0	13.0
13.0	54.0	13.0	16.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0

#ID = F3D14776
#Short = 3iv5_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp optimal binding sequence F1
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
11.0	67.0	9.0	9.0
24.0	24.0	24.0	24.0
9.0	69.0	9.0	9.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
67.0	11.0	9.0	9.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14777
#Short = 3iyd_H
#Long = Catabolite gene activator
#W = 11
#Organisms = Escherichia coli (strain K12)
#Description = Three-dimensional EM structure of an intact activator-dependent transcription initiation complex
81.0	5.0	5.0	5.0
15.0	20.0	11.0	50.0
5.0	80.0	5.0	6.0
81.0	0.0	0.0	15.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	5.0	5.0	80.0

#ID = F3D14778
#Short = 3jr9_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp optimal binding sequence F2
3.0	5.0	3.0	85.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
5.0	13.0	75.0	3.0
85.0	5.0	3.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	3.0	3.0	85.0
13.0	77.0	3.0	3.0
24.0	24.0	24.0	24.0
68.0	13.0	10.0	5.0
0.0	96.0	0.0	0.0
85.0	3.0	3.0	5.0

#ID = F3D14779
#Short = 3jr9_B
#Long = DNA-binding protein fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp optimal binding sequence F2
0.0	0.0	0.0	96.0
54.0	13.0	13.0	16.0
24.0	24.0	24.0	24.0
54.0	13.0	16.0	13.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14780
#Short = 3jra_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27bp non consensus sequence DNA F6
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
11.0	11.0	63.0	11.0
24.0	24.0	24.0	24.0
11.0	11.0	12.0	62.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
5.0	5.0	79.0	7.0
24.0	24.0	24.0	24.0
11.0	58.0	16.0	11.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14781
#Short = 3jra_B
#Long = DNA-binding protein fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27bp non consensus sequence DNA F6
0.0	0.0	0.0	96.0
13.0	13.0	57.0	13.0
24.0	24.0	24.0	24.0
16.0	54.0	13.0	13.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14782
#Short = 3jrb_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp DNA F24 containing T-tract at center
3.0	3.0	6.0	84.0
3.0	3.0	87.0	3.0
3.0	88.0	3.0	2.0
24.0	24.0	24.0	24.0
3.0	92.0	0.0	1.0
87.0	3.0	3.0	3.0
72.0	10.0	11.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
84.0	3.0	3.0	6.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
84.0	3.0	6.0	3.0

#ID = F3D14783
#Short = 3jrb_B
#Long = DNA-binding protein fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp DNA F24 containing T-tract at center
9.0	67.0	9.0	11.0
67.0	11.0	9.0	9.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
67.0	9.0	11.0	9.0

#ID = F3D14784
#Short = 3jrc_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
11.0	67.0	11.0	7.0
24.0	24.0	24.0	24.0
5.0	7.0	79.0	5.0
79.0	5.0	5.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
11.0	73.0	5.0	7.0
79.0	7.0	5.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14785
#Short = 3jrc_B
#Long = DNA-binding protein fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center
8.0	72.0	8.0	8.0
69.0	11.0	8.0	8.0
24.0	24.0	24.0	24.0
63.0	8.0	8.0	17.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14786
#Short = 3jrd_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp DNA F25 containing T2A3 sequence at center
7.0	5.0	5.0	79.0
0.0	0.0	96.0	0.0
0.0	90.0	1.0	5.0
24.0	24.0	24.0	24.0
7.0	79.0	5.0	5.0
79.0	5.0	5.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	81.0	5.0	5.0
79.0	5.0	5.0	7.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14787
#Short = 3jrd_B
#Long = DNA-binding protein fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp DNA F25 containing T2A3 sequence at center
13.0	57.0	13.0	13.0
54.0	13.0	13.0	16.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14788
#Short = 3jre_B
#Long = DNA-binding protein fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp DNA F26 containing A-tract at center
7.0	73.0	7.0	9.0
66.0	14.0	9.0	7.0
24.0	24.0	24.0	24.0
81.0	7.0	1.0	7.0
0.0	96.0	0.0	0.0
73.0	7.0	9.0	7.0

#ID = F3D14789
#Short = 3jrf_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp DNA F27 containing a C/G at center
3.0	5.0	3.0	85.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
3.0	13.0	77.0	3.0
85.0	3.0	3.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	87.0	3.0	3.0
15.0	3.0	3.0	75.0
24.0	24.0	24.0	24.0
70.0	13.0	10.0	3.0
0.0	96.0	0.0	0.0
85.0	3.0	3.0	5.0

#ID = F3D14790
#Short = 3jrf_B
#Long = DNA-binding protein fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp DNA F27 containing a C/G at center
8.0	69.0	11.0	8.0
72.0	8.0	8.0	8.0
24.0	24.0	24.0	24.0
69.0	8.0	8.0	11.0
0.0	96.0	0.0	0.0
87.0	0.0	0.0	9.0

#ID = F3D14791
#Short = 3jrg_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp non consensus sequence DNA F18
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
9.0	67.0	11.0	9.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
67.0	11.0	9.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
11.0	67.0	9.0	9.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14792
#Short = 3jrg_B
#Long = DNA-binding protein fis
#W = 5
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp non consensus sequence DNA F18
13.0	54.0	13.0	16.0
24.0	24.0	24.0	24.0
54.0	13.0	16.0	13.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14793
#Short = 3jrh_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp non consensus sequence DNA F21
1.0	2.0	2.0	91.0
0.0	0.0	96.0	0.0
8.0	62.0	15.0	11.0
24.0	24.0	24.0	24.0
0.0	78.0	0.0	18.0
4.0	69.0	17.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	18.0	66.0	8.0
4.0	0.0	0.0	92.0
24.0	24.0	24.0	24.0
68.0	2.0	13.0	13.0
0.0	96.0	0.0	0.0
89.0	2.0	2.0	3.0

#ID = F3D14794
#Short = 3jrh_B
#Long = DNA-binding protein fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp non consensus sequence DNA F21
9.0	11.0	67.0	9.0
69.0	9.0	9.0	9.0
24.0	24.0	24.0	24.0
69.0	9.0	9.0	9.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14795
#Short = 3jri_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp non consensus sequence DNA F23
4.0	6.0	4.0	82.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
79.0	4.0	4.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
18.0	54.0	15.0	9.0
24.0	24.0	24.0	24.0
18.0	0.0	77.0	1.0
0.0	96.0	0.0	0.0
82.0	4.0	4.0	6.0

#ID = F3D14796
#Short = 3jri_B
#Long = DNA-binding protein fis
#W = 5
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp non consensus sequence DNA F23
13.0	54.0	13.0	16.0
24.0	24.0	24.0	24.0
54.0	16.0	13.0	13.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14797
#Short = 3jtg_A
#Long = ETS-related transcription factor Elf-3
#W = 9
#Organisms = Mus musculus
#Description = Crystal structure of mouse Elf3 C-terminal DNA-binding domain in complex with type II TGF-beta receptor promoter DNA
71.0	4.0	13.0	8.0
53.0	17.0	13.0	13.0
24.0	24.0	24.0	24.0
9.0	61.0	13.0	13.0
87.0	1.0	8.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
71.0	4.0	8.0	13.0

#ID = F3D14798
#Short = 3jxb_CD
#Long = Repressor protein C2
#W = 17
#Organisms = Enterobacteria phage P22
#Description = Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C
2.0	3.0	3.0	88.0
3.0	6.0	3.0	84.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
3.0	0.0	92.0	1.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	92.0	1.0	3.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
87.0	3.0	3.0	3.0
84.0	6.0	3.0	3.0
73.0	3.0	9.0	11.0
3.0	6.0	3.0	84.0
84.0	3.0	6.0	3.0

#ID = F3D14799
#Short = 3jxb_D
#Long = Repressor protein C2
#W = 17
#Organisms = Enterobacteria phage P22
#Description = Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C
6.0	9.0	6.0	75.0
6.0	6.0	6.0	78.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
6.0	0.0	89.0	1.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	6.0	6.0	75.0
78.0	6.0	6.0	6.0

#ID = F3D14800
#Short = 3jxc_L
#Long = Repressor protein C2
#W = 5
#Organisms = Enterobacteria phage P22
#Description = Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9T in the presence of Tl+
11.0	9.0	9.0	67.0
9.0	9.0	11.0	67.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
11.0	9.0	67.0	9.0

#ID = F3D14801
#Short = 3jxc_LR
#Long = Repressor protein C2
#W = 14
#Organisms = Enterobacteria phage P22
#Description = Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9T in the presence of Tl+
6.0	6.0	8.0	76.0
8.0	6.0	6.0	76.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
6.0	0.0	89.0	1.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	89.0	1.0	6.0
0.0	0.0	0.0	96.0
6.0	6.0	0.0	84.0
76.0	6.0	8.0	6.0
89.0	0.0	6.0	1.0

#ID = F3D14802
#Short = 3jxd_L
#Long = Repressor protein C2
#W = 5
#Organisms = Enterobacteria phage P22
#Description = Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C in the presence of Rb+
8.0	8.0	11.0	69.0
17.0	8.0	8.0	63.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
19.0	8.0	61.0	8.0

#ID = F3D14803
#Short = 3jxd_LR
#Long = Repressor protein C2
#W = 14
#Organisms = Enterobacteria phage P22
#Description = Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C in the presence of Rb+
11.0	5.0	7.0	73.0
11.0	1.0	5.0	79.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
34.0	0.0	62.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	84.0	0.0	11.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
81.0	5.0	5.0	5.0
79.0	11.0	1.0	5.0

#ID = F3D14804
#Short = 3ket_A
#Long = Redox-sensing transcriptional repressor rex
#W = 8
#Organisms = strain NEM316,Streptococcus agalactiae,Streptococcus agalactiae serotype III
#Description = Crystal structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae bound to a palindromic operator
7.0	7.0	14.0	68.0
7.0	14.0	16.0	59.0
0.0	0.0	15.0	81.0
0.0	96.0	0.0	0.0
82.0	0.0	7.0	7.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
88.0	0.0	0.0	8.0

#ID = F3D14805
#Short = 3kmp_A
#Long = SMAD1-MH1
#W = 6
#Organisms = Mus musculus
#Description = Crystal Structure of SMAD1-MH1/DNA complex
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
13.0	13.0	13.0	57.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
57.0	13.0	13.0	13.0

#ID = F3D14806
#Short = 3kmp_AB
#Long = SMAD1-MH1
#W = 10
#Organisms = Mus musculus
#Description = Crystal Structure of SMAD1-MH1/DNA complex
3.0	3.0	10.0	80.0
0.0	0.0	96.0	0.0
3.0	6.0	15.0	72.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
3.0	5.0	69.0	19.0
57.0	7.0	13.0	19.0
0.0	96.0	0.0	0.0
3.0	7.0	3.0	83.0

#ID = F3D14807
#Short = 3kov_AB
#Long = Myocyte-specific enhancer factor 2A
#W = 10
#Organisms = Homo sapiens
#Description = Structure of MEF2A bound to DNA reveals a completely folded MADS-box/MEF2 domain that recognizes DNA and recruits transcription co-factors
9.0	11.0	9.0	67.0
0.0	0.0	0.0	96.0
67.0	9.0	9.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
67.0	11.0	9.0	9.0
0.0	0.0	96.0	0.0

#ID = F3D14808
#Short = 3kov_IJ
#Long = Myocyte-specific enhancer factor 2A
#W = 10
#Organisms = Homo sapiens
#Description = Structure of MEF2A bound to DNA reveals a completely folded MADS-box/MEF2 domain that recognizes DNA and recruits transcription co-factors
9.0	69.0	9.0	9.0
0.0	0.0	0.0	96.0
67.0	9.0	9.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
67.0	11.0	9.0	9.0

#ID = F3D14809
#Short = 3l1p_A
#Long = POU domain, class 5, transcription factor 1
#W = 9
#Organisms = Mus musculus
#Description = POU protein:DNA complex
8.0	7.0	7.0	74.0
0.0	0.0	0.0	96.0
7.0	7.0	7.0	75.0
0.0	49.0	46.0	1.0
96.0	0.0	0.0	0.0
78.0	8.0	3.0	7.0
96.0	0.0	0.0	0.0
7.0	7.0	1.0	81.0
0.0	7.0	81.0	8.0

#ID = F3D14810
#Short = 3l1p_AB
#Long = POU domain, class 5, transcription factor 1
#W = 17
#Organisms = Mus musculus
#Description = POU protein:DNA complex
6.0	84.0	3.0	3.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
6.0	3.0	3.0	84.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
3.0	88.0	0.0	5.0
3.0	76.0	10.0	7.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
3.0	6.0	7.0	80.0
0.0	84.0	11.0	1.0
96.0	0.0	0.0	0.0
84.0	3.0	3.0	6.0
96.0	0.0	0.0	0.0
7.0	1.0	0.0	88.0
3.0	3.0	88.0	2.0

#ID = F3D14811
#Short = 3l2c_A
#Long = Forkhead box protein O4
#W = 6
#Organisms = Homo sapiens
#Description = Crystal Structure of the DNA Binding Domain of FOXO4 Bound to DNA
6.0	6.0	8.0	76.0
6.0	6.0	76.0	8.0
6.0	6.0	8.0	76.0
0.0	0.0	0.0	96.0
6.0	6.0	8.0	76.0
84.0	6.0	6.0	0.0

#ID = F3D14812
#Short = 3laj_AD
#Long = Arginine repressor
#W = 13
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-arginine.
8.0	6.0	6.0	76.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
78.0	6.0	6.0	6.0
0.0	0.0	0.0	96.0
76.0	6.0	8.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	78.0	6.0
96.0	0.0	0.0	0.0
0.0	6.0	6.0	84.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14813
#Short = 3laj_CE
#Long = Arginine repressor
#W = 13
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-arginine.
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
78.0	6.0	6.0	6.0
0.0	0.0	0.0	96.0
6.0	76.0	6.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	8.0	6.0	76.0
96.0	0.0	0.0	0.0
0.0	6.0	6.0	84.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
76.0	6.0	6.0	8.0

#ID = F3D14814
#Short = 3laj_E
#Long = Arginine repressor
#W = 5
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-arginine.
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
57.0	13.0	13.0	13.0
0.0	0.0	0.0	96.0
13.0	57.0	13.0	13.0

#ID = F3D14815
#Short = 3lap_B
#Long = Arginine repressor
#W = 6
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-canavanine.
11.0	9.0	9.0	67.0
96.0	0.0	0.0	0.0
11.0	9.0	9.0	67.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
69.0	9.0	9.0	9.0

#ID = F3D14816
#Short = 3lap_CE
#Long = Arginine repressor
#W = 13
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-canavanine.
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
76.0	8.0	6.0	6.0
0.0	0.0	0.0	96.0
6.0	76.0	6.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	0.0	84.0
96.0	0.0	0.0	0.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
76.0	6.0	8.0	6.0

#ID = F3D14817
#Short = 3m9e_AB
#Long = Thyroid hormone receptor beta
#W = 18
#Organisms = Rattus norvegicus
#Description = Thyroid hormone beta DNA binding domain homodimer with inverted palindrome TRE
7.0	0.0	0.0	89.0
0.0	0.0	96.0	0.0
84.0	0.0	7.0	5.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	25.0	11.0	53.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
31.0	7.0	51.0	7.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
3.0	9.0	11.0	73.0
0.0	96.0	0.0	0.0
81.0	3.0	12.0	0.0

#ID = F3D14818
#Short = 3m9e_E
#Long = Thyroid hormone receptor beta
#W = 5
#Organisms = Rattus norvegicus
#Description = Thyroid hormone beta DNA binding domain homodimer with inverted palindrome TRE
13.0	13.0	16.0	54.0
0.0	0.0	96.0	0.0
54.0	13.0	13.0	16.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14819
#Short = 3m9e_EF
#Long = Thyroid hormone receptor beta
#W = 18
#Organisms = Rattus norvegicus
#Description = Thyroid hormone beta DNA binding domain homodimer with inverted palindrome TRE
3.0	3.0	2.0	88.0
0.0	0.0	96.0	0.0
65.0	14.0	7.0	10.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	35.0	8.0	46.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
14.0	8.0	60.0	14.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
1.0	17.0	0.0	78.0
0.0	96.0	0.0	0.0
81.0	3.0	3.0	9.0

#ID = F3D14820
#Short = 3mfk_AB
#Long = Protein C-ets-1
#W = 13
#Organisms = Homo sapiens
#Description = Ets1 complex with stromelysin-1 promoter DNA
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
17.0	52.0	19.0	8.0
10.0	17.0	17.0	52.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	10.0	8.0	78.0

#ID = F3D14821
#Short = 3mlp_E
#Long = Transcription factor COE1
#W = 13
#Organisms = Mus musculus
#Description = Early B-cell Factor 1 (Ebf1) bound to DNA
4.0	4.0	4.0	84.0
6.0	12.0	16.0	62.0
24.0	24.0	24.0	24.0
4.0	4.0	4.0	84.0
6.0	4.0	16.0	70.0
0.0	96.0	0.0	0.0
1.0	91.0	0.0	4.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
16.0	4.0	72.0	4.0

#ID = F3D14822
#Short = 3mlp_EF
#Long = Transcription factor COE1
#W = 15
#Organisms = Mus musculus
#Description = Early B-cell Factor 1 (Ebf1) bound to DNA
0.0	6.0	5.0	85.0
12.0	10.0	10.0	64.0
24.0	24.0	24.0	24.0
10.0	5.0	5.0	76.0
5.0	12.0	5.0	74.0
0.0	96.0	0.0	0.0
0.0	91.0	0.0	5.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
86.0	5.0	5.0	0.0

#ID = F3D14823
#Short = 3mu6_AB
#Long = Myocyte-specific enhancer factor 2A
#W = 10
#Organisms = Homo sapiens
#Description = Inhibiting the Binding of Class IIa Histone Deacetylases to Myocyte Enhancer Factor-2 by Small Molecules
9.0	87.0	0.0	0.0
1.0	9.0	0.0	86.0
69.0	9.0	9.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
11.0	9.0	9.0	67.0
86.0	0.0	10.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14824
#Short = 3mzh_A
#Long = PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBA
#W = 5
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = Crystal structure of cAMP receptor protein from mycobacterium tuberculosis in complex with cAMP and its DNA binding element
7.0	7.0	7.0	75.0
9.0	73.0	7.0	7.0
75.0	7.0	7.0	7.0
7.0	73.0	7.0	9.0
96.0	0.0	0.0	0.0

#ID = F3D14825
#Short = 3mzh_AB
#Long = PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBA
#W = 16
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = Crystal structure of cAMP receptor protein from mycobacterium tuberculosis in complex with cAMP and its DNA binding element
7.0	73.0	7.0	9.0
9.0	7.0	73.0	7.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
73.0	9.0	7.0	7.0
7.0	73.0	9.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14826
#Short = 3n4m_ABC
#Long = Catabolite gene activator
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = E. coli RNA polymerase alpha subunit C-terminal domain in complex with CAP and DNA
0.0	0.0	0.0	96.0
19.0	20.0	9.0	48.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	1.0	19.0	76.0
0.0	0.0	96.0	0.0
11.0	9.0	9.0	67.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14827
#Short = 3nbn_AD
#Long = Recombining binding protein suppressor of hairless
#W = 30
#Organisms = Homo sapiens
#Description = Crystal structure of a dimer of Notch Transcription Complex trimers on HES1 DNA
7.0	76.0	10.0	3.0
0.0	4.0	0.0	92.0
11.0	11.0	63.0	11.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
10.0	7.0	76.0	3.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
84.0	9.0	3.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	7.0	7.0	69.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
88.0	2.0	3.0	3.0

#ID = F3D14828
#Short = 3nbn_D
#Long = Recombining binding protein suppressor of hairless
#W = 8
#Organisms = Homo sapiens
#Description = Crystal structure of a dimer of Notch Transcription Complex trimers on HES1 DNA
13.0	6.0	6.0	71.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
6.0	75.0	6.0	9.0
75.0	6.0	9.0	6.0
24.0	24.0	24.0	24.0
6.0	6.0	78.0	6.0

#ID = F3D14829
#Short = 3nm9_DGJ
#Long = High mobility group protein D
#W = 14
#Organisms = Drosophila melanogaster
#Description = HMGD(M13A)-DNA complex
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
15.0	18.0	49.0	14.0
86.0	4.0	3.0	3.0
3.0	4.0	3.0	86.0
51.0	12.0	15.0	18.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	87.0	3.0	3.0
0.0	0.0	96.0	0.0

#ID = F3D14830
#Short = 3oqm_AC
#Long = Catabolite control protein A
#W = 14
#Organisms = Bacillus subtilis,strain 168
#Description = structure of ccpa-hpr-ser46p-ackA2 complex
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
51.0	12.0	19.0	14.0
12.0	14.0	19.0	51.0
57.0	6.0	21.0	12.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14831
#Short = 3oqm_C
#Long = Catabolite control protein A
#W = 7
#Organisms = Bacillus subtilis,strain 168
#Description = structure of ccpa-hpr-ser46p-ackA2 complex
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
54.0	13.0	13.0	16.0
13.0	13.0	13.0	57.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14832
#Short = 3oqn_C
#Long = Catabolite control protein A
#W = 8
#Organisms = Bacillus subtilis,strain 168
#Description = Structure of ccpa-hpr-ser46-p-gntr-down cre
7.0	73.0	9.0	7.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
7.0	7.0	9.0	73.0
9.0	7.0	7.0	73.0
7.0	9.0	7.0	73.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14833
#Short = 3oqo_AC
#Long = Catabolite control protein A
#W = 14
#Organisms = Bacillus subtilis,strain 168
#Description = Ccpa-hpr-ser46p-syn cre
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
68.0	10.0	9.0	9.0
65.0	9.0	13.0	9.0
82.0	6.0	4.0	4.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
4.0	84.0	4.0	4.0
9.0	9.0	10.0	68.0
24.0	24.0	24.0	24.0
91.0	4.0	1.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14834
#Short = 3oqo_C
#Long = Catabolite control protein A
#W = 8
#Organisms = Bacillus subtilis,strain 168
#Description = Ccpa-hpr-ser46p-syn cre
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
57.0	12.0	12.0	15.0
51.0	14.0	19.0	12.0
90.0	0.0	6.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
15.0	12.0	57.0	12.0

#ID = F3D14835
#Short = 3p57_AB
#Long = Myocyte-specific enhancer factor 2A
#W = 9
#Organisms = Homo sapiens
#Description = Crystal structure of the p300 TAZ2 domain bound to MEF2 on DNA
0.0	0.0	0.0	96.0
69.0	11.0	8.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
11.0	8.0	8.0	69.0
87.0	0.0	9.0	0.0
8.0	8.0	69.0	11.0

#ID = F3D14836
#Short = 3p57_IJ
#Long = Myocyte-specific enhancer factor 2A
#W = 10
#Organisms = Homo sapiens
#Description = Crystal structure of the p300 TAZ2 domain bound to MEF2 on DNA
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
67.0	9.0	9.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	9.0	9.0	69.0
96.0	0.0	0.0	0.0
67.0	11.0	9.0	9.0

#ID = F3D14837
#Short = 3pvp_B
#Long = Chromosomal replication initiator protein dnaA
#W = 9
#Organisms = Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
#Description = Structure of Mycobacterium tuberculosis DnaA-DBD in complex with box2 DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
5.0	6.0	0.0	85.0
5.0	1.0	90.0	0.0
10.0	0.0	86.0	0.0
64.0	5.0	10.0	17.0
0.0	17.0	10.0	69.0
24.0	24.0	24.0	24.0
69.0	10.0	5.0	12.0

#ID = F3D14838
#Short = 3pvv_B
#Long = Chromosomal replication initiator protein dnaA
#W = 9
#Organisms = Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
#Description = Structure of Mycobacterium tuberculosis DnaA-DBD in complex with box1 DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
5.0	0.0	91.0	0.0
8.0	17.0	58.0	13.0
80.0	8.0	4.0	4.0
0.0	91.0	4.0	1.0
84.0	4.0	4.0	4.0
69.0	4.0	4.0	19.0

#ID = F3D14839
#Short = 3q3d_A
#Long = Multidrug-efflux transporter 1 regulator
#W = 4
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of BmrR bound to puromycin
11.0	67.0	9.0	9.0
9.0	67.0	11.0	9.0
9.0	67.0	9.0	11.0
0.0	0.0	0.0	96.0

#ID = F3D14840
#Short = 3q5f_AB
#Long = Transcriptional regulator slyA
#W = 20
#Organisms = Salmonella enterica,Salmonella enterica subsp. enterica serovar Typhimurium,strain LT2 / SGSC1412 / ATCC 700720
#Description = Crystal structure of the Salmonella transcriptional regulator SlyA in complex with DNA
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
2.0	0.0	0.0	94.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	2.0	94.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
15.0	57.0	14.0	10.0
0.0	0.0	0.0	96.0
85.0	7.0	0.0	4.0
44.0	18.0	15.0	19.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
15.0	4.0	2.0	75.0
88.0	2.0	4.0	2.0

#ID = F3D14841
#Short = 3qoq_ABCD
#Long = Alginate and motility regulator Z
#W = 13
#Organisms = Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
#Description = Crystal Structure of the Transcription Factor AmrZ in Complex with the 18 Base Pair amrZ1 Binding Site
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
9.0	7.0	73.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
7.0	9.0	7.0	73.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
75.0	7.0	7.0	7.0
73.0	7.0	7.0	9.0

#ID = F3D14842
#Short = 3qrf_G
#Long = Forkhead box protein P3
#W = 6
#Organisms = Homo sapiens
#Description = Structure of a domain-swapped FOXP3 dimer
11.0	9.0	67.0	9.0
69.0	9.0	9.0	9.0
96.0	0.0	0.0	0.0
67.0	9.0	11.0	9.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14843
#Short = 3qsv_A
#Long = Mothers against decapentaplegic homolog 4
#W = 5
#Organisms = Mus musculus
#Description = Structural basis for DNA recognition by constitutive Smad4 MH1 dimers
6.0	6.0	75.0	9.0
18.0	20.0	23.0	35.0
6.0	73.0	10.0	7.0
1.0	4.0	2.0	89.0
58.0	11.0	15.0	12.0

#ID = F3D14844
#Short = 3qsv_BC
#Long = Mothers against decapentaplegic homolog 4
#W = 8
#Organisms = Mus musculus
#Description = Structural basis for DNA recognition by constitutive Smad4 MH1 dimers
0.0	0.0	96.0	0.0
13.0	13.0	16.0	54.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
54.0	13.0	13.0	16.0
0.0	96.0	0.0	0.0

#ID = F3D14845
#Short = 3r8f_ABCD
#Long = Chromosomal replication initiator protein dnaA
#W = 10
#Organisms = Aquifex aeolicus,strain VF5
#Description = Replication initiator DnaA bound to AMPPCP and single-stranded DNA
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
54.0	13.0	13.0	16.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
57.0	13.0	13.0	13.0

#ID = F3D14846
#Short = 3ri4_D
#Long = Protein C-ets-1
#W = 6
#Organisms = Homo sapiens
#Description = Ets1 cooperative binding to widely separated sites on promoter DNA
67.0	9.0	11.0	9.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
9.0	9.0	11.0	67.0
9.0	9.0	67.0	11.0

#ID = F3D14847
#Short = 3rkq_AB
#Long = Homeobox protein Nkx-2.5
#W = 19
#Organisms = Homo sapiens
#Description = NKX2.5 Homeodomain dimer bound to ANF-242 DNA
0.0	3.0	2.0	91.0
2.0	78.0	2.0	14.0
76.0	4.0	14.0	2.0
96.0	0.0	0.0	0.0
2.0	0.0	94.0	0.0
94.0	0.0	2.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
2.0	90.0	2.0	2.0
59.0	9.0	14.0	14.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
4.0	14.0	0.0	78.0
4.0	86.0	4.0	2.0
94.0	0.0	2.0	0.0

#ID = F3D14848
#Short = 3rkq_B
#Long = Homeobox protein Nkx-2.5
#W = 7
#Organisms = Homo sapiens
#Description = NKX2.5 Homeodomain dimer bound to ANF-242 DNA
5.0	25.0	4.0	62.0
10.0	70.0	4.0	12.0
66.0	12.0	10.0	8.0
96.0	0.0	0.0	0.0
4.0	0.0	92.0	0.0
87.0	1.0	4.0	4.0
4.0	4.0	84.0	4.0

#ID = F3D14849
#Short = 3s8q_A
#Long = R-M CONTROLLER PROTEIN
#W = 9
#Organisms = Enterobacter sp. RFL1396
#Description = Crystal structure of the R-M controller protein C.Esp1396I OL operator complex
11.0	19.0	9.0	57.0
57.0	11.0	19.0	9.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
76.0	9.0	11.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14850
#Short = 3s8q_AB
#Long = R-M CONTROLLER PROTEIN
#W = 16
#Organisms = Enterobacter sp. RFL1396
#Description = Crystal structure of the R-M controller protein C.Esp1396I OL operator complex
0.0	96.0	0.0	0.0
4.0	1.0	91.0	0.0
4.0	1.0	91.0	0.0
86.0	0.0	9.0	1.0
0.0	96.0	0.0	0.0
4.0	13.0	9.0	70.0
24.0	24.0	24.0	24.0
4.0	13.0	4.0	75.0
68.0	9.0	10.0	9.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
84.0	4.0	4.0	4.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14851
#Short = 3swm_ABD
#Long = NAC domain-containing protein 19
#W = 18
#Organisms = Arabidopsis thaliana
#Description = The NAC domain of ANAC019 in complex with DNA, gold derivative
0.0	0.0	0.0	96.0
4.0	5.0	87.0	0.0
0.0	87.0	5.0	4.0
24.0	24.0	24.0	24.0
1.0	4.0	4.0	87.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
62.0	13.0	17.0	4.0
4.0	82.0	6.0	4.0
0.0	0.0	96.0	0.0
13.0	61.0	4.0	18.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14852
#Short = 3swm_B
#Long = NAC domain-containing protein 19
#W = 6
#Organisms = Arabidopsis thaliana
#Description = The NAC domain of ANAC019 in complex with DNA, gold derivative
9.0	7.0	7.0	73.0
7.0	9.0	73.0	7.0
7.0	75.0	7.0	7.0
24.0	24.0	24.0	24.0
7.0	9.0	7.0	73.0
0.0	0.0	96.0	0.0

#ID = F3D14853
#Short = 3swp_A
#Long = NAC domain-containing protein 19
#W = 5
#Organisms = Arabidopsis thaliana
#Description = ANAC019 NAC domain in complex with DNA
9.0	69.0	9.0	9.0
0.0	0.0	96.0	0.0
69.0	9.0	9.0	9.0
67.0	11.0	9.0	9.0
0.0	0.0	96.0	0.0

#ID = F3D14854
#Short = 3swp_ABCD
#Long = NAC domain-containing protein 19
#W = 16
#Organisms = Arabidopsis thaliana
#Description = ANAC019 NAC domain in complex with DNA
0.0	96.0	0.0	0.0
13.0	13.0	56.0	14.0
24.0	24.0	24.0	24.0
1.0	4.0	0.0	91.0
15.0	8.0	4.0	69.0
8.0	67.0	13.0	8.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	82.0	6.0	4.0
0.0	0.0	96.0	0.0
87.0	4.0	1.0	4.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14855
#Short = 3tmm_A
#Long = Transcription factor A, mitochondrial
#W = 17
#Organisms = Homo sapiens
#Description = TFAM imposes a U-turn on mitochondrial DNA
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
79.0	5.0	5.0	7.0
5.0	5.0	81.0	5.0
24.0	24.0	24.0	24.0
5.0	81.0	5.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
90.0	0.0	6.0	0.0
7.0	79.0	5.0	5.0
5.0	5.0	5.0	81.0

#ID = F3D14856
#Short = 3tq6_AB
#Long = Transcription factor A, mitochondrial
#W = 37
#Organisms = Homo sapiens
#Description = Crystal structure of human mitochondrial transcription factor A, TFAM or mtTFA, bound to the light strand promoter LSP
94.0	0.0	2.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
79.0	9.0	2.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
3.0	91.0	2.0	0.0
77.0	5.0	7.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
79.0	7.0	4.0	6.0
91.0	2.0	3.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
11.0	7.0	4.0	74.0
8.0	77.0	7.0	4.0
77.0	11.0	4.0	4.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	92.0	4.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
2.0	92.0	2.0	0.0

#ID = F3D14857
#Short = 3tq6_B
#Long = Transcription factor A, mitochondrial
#W = 16
#Organisms = Homo sapiens
#Description = Crystal structure of human mitochondrial transcription factor A, TFAM or mtTFA, bound to the light strand promoter LSP
91.0	5.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
12.0	10.0	10.0	64.0
12.0	64.0	10.0	10.0
76.0	10.0	5.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	85.0	10.0	1.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
6.0	85.0	5.0	0.0

#ID = F3D14858
#Short = 3u2b_C
#Long = Transcription factor SOX-4
#W = 7
#Organisms = Mus musculus
#Description = Structure of the Sox4 HMG domain bound to DNA
12.0	64.0	10.0	10.0
2.0	10.0	10.0	74.0
64.0	10.0	12.0	10.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14859
#Short = 3u3w_B
#Long = Transcriptional activator PlcR protein
#W = 6
#Organisms = Bacillus thuringiensis,Bacillus thuringiensis Bt407
#Description = Crystal Structure of Bacillus thuringiensis PlcR in complex with the peptide PapR7 and DNA
24.0	12.0	12.0	48.0
24.0	12.0	48.0	12.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14860
#Short = 3ufd_AB
#Long = Regulatory protein
#W = 18
#Organisms = Enterobacter sp. RFL1396
#Description = C.Esp1396I bound to its highest affinity operator site OM
3.0	1.0	0.0	92.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
1.0	86.0	3.0	6.0
0.0	0.0	96.0	0.0
69.0	11.0	7.0	9.0
0.0	96.0	0.0	0.0
7.0	11.0	7.0	71.0
90.0	4.0	1.0	1.0
0.0	1.0	3.0	92.0
92.0	1.0	1.0	2.0
0.0	0.0	96.0	0.0
11.0	7.0	7.0	71.0
0.0	96.0	0.0	0.0
7.0	7.0	7.0	75.0
92.0	1.0	2.0	1.0
0.0	96.0	0.0	0.0
86.0	4.0	1.0	5.0

#ID = F3D14861
#Short = 3ufd_E
#Long = Regulatory protein
#W = 7
#Organisms = Enterobacter sp. RFL1396
#Description = C.Esp1396I bound to its highest affinity operator site OM
0.0	0.0	96.0	0.0
9.0	9.0	11.0	67.0
0.0	96.0	0.0	0.0
9.0	9.0	9.0	69.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
67.0	9.0	11.0	9.0

#ID = F3D14862
#Short = 3uk3_CD
#Long = Zinc finger protein 217
#W = 18
#Organisms = Homo sapiens
#Description = Crystal structure of ZNF217 bound to DNA
4.0	4.0	10.0	78.0
0.0	1.0	74.0	21.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
78.0	8.0	4.0	6.0
8.0	4.0	8.0	76.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
76.0	4.0	8.0	8.0
4.0	4.0	6.0	82.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14863
#Short = 3uk3_D
#Long = Zinc finger protein 217
#W = 8
#Organisms = Homo sapiens
#Description = Crystal structure of ZNF217 bound to DNA
11.0	9.0	9.0	67.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
67.0	9.0	11.0	9.0
9.0	11.0	9.0	67.0

#ID = F3D14864
#Short = 3v79_C
#Long = Recombining binding protein suppressor of hairless
#W = 8
#Organisms = Homo sapiens
#Description = Structure of human Notch1 transcription complex including CSL, RAM, ANK, and MAML-1 on HES-1 promoter DNA sequence
5.0	6.0	5.0	80.0
6.0	5.0	80.0	5.0
0.0	0.0	0.0	96.0
5.0	6.0	80.0	5.0
5.0	6.0	80.0	5.0
5.0	6.0	80.0	5.0
96.0	0.0	0.0	0.0
80.0	5.0	5.0	6.0

#ID = F3D14865
#Short = 3vd6_C
#Long = Erythroid transcription factor
#W = 9
#Organisms = Mus musculus
#Description = Both Zn Fingers of GATA1 Bound to Palindromic DNA Recognition Site, P21 Crystal Form
0.0	16.0	16.0	64.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
16.0	16.0	16.0	48.0

#ID = F3D14866
#Short = 3w6v_A
#Long = AdpA
#W = 6
#Organisms = Streptomyces griseus
#Description = Crystal structure of the DNA-binding domain of AdpA, the global transcriptional factor, in complex with a target DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
13.0	16.0	54.0	13.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
13.0	13.0	57.0	13.0

#ID = F3D14867
#Short = 3wgi_CD
#Long = Redox-sensing transcriptional repressor rex
#W = 18
#Organisms = Thermoanaerobacter ethanolicus,Thermoanaerobacter ethanolicus JW 200
#Description = Crystal structure of RSP in complex with beta-NAD+ and operator DNA
4.0	4.0	6.0	82.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
6.0	4.0	4.0	82.0
96.0	0.0	0.0	0.0
82.0	4.0	6.0	4.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	4.0	6.0	82.0
0.0	0.0	0.0	96.0
84.0	4.0	4.0	4.0
82.0	6.0	4.0	4.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
84.0	4.0	4.0	4.0

#ID = F3D14868
#Short = 3wgi_D
#Long = Redox-sensing transcriptional repressor rex
#W = 7
#Organisms = Thermoanaerobacter ethanolicus,Thermoanaerobacter ethanolicus JW 200
#Description = Crystal structure of RSP in complex with beta-NAD+ and operator DNA
9.0	11.0	9.0	67.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
9.0	9.0	11.0	67.0
96.0	0.0	0.0	0.0
67.0	11.0	9.0	9.0

#ID = F3D14869
#Short = 3wts_A
#Long = Runt-related transcription factor 1
#W = 6
#Organisms = Mus musculus
#Description = Crystal structure of the complex comprised of ETS1, RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
11.0	9.0	67.0	9.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
69.0	9.0	9.0	9.0
0.0	96.0	0.0	0.0
67.0	9.0	9.0	11.0

#ID = F3D14870
#Short = 3wts_AC
#Long = Runt-related transcription factor 1
#W = 10
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal structure of the complex comprised of ETS1, RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
6.0	8.0	76.0	6.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
76.0	6.0	8.0	6.0
0.0	96.0	0.0	0.0
76.0	6.0	6.0	8.0
7.0	6.0	0.0	83.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
6.0	8.0	6.0	76.0

#ID = F3D14871
#Short = 3wtt_AC
#Long = Runt-related transcription factor 1
#W = 10
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal structure of the complex comprised of phosphorylated ETS1, RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
10.0	10.0	64.0	12.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
76.0	10.0	0.0	10.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
10.0	10.0	10.0	66.0

#ID = F3D14872
#Short = 3wtt_F
#Long = Runt-related transcription factor 1
#W = 5
#Organisms = Mus musculus
#Description = Crystal structure of the complex comprised of phosphorylated ETS1, RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
16.0	13.0	13.0	54.0
0.0	0.0	96.0	0.0
16.0	13.0	13.0	54.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14873
#Short = 3wtu_AC
#Long = Runt-related transcription factor 1
#W = 10
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal structure of the complex comprised of ETS1 (V170A), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
9.0	7.0	73.0	7.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
73.0	7.0	7.0	9.0
0.0	96.0	0.0	0.0
73.0	7.0	7.0	9.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	7.0	9.0	73.0

#ID = F3D14874
#Short = 3wtu_F
#Long = Runt-related transcription factor 1
#W = 8
#Organisms = Mus musculus
#Description = Crystal structure of the complex comprised of ETS1 (V170A), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
8.0	8.0	8.0	72.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
8.0	17.0	17.0	54.0
8.0	0.0	19.0	69.0

#ID = F3D14875
#Short = 3wtv_AC
#Long = Runt-related transcription factor 1
#W = 10
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal structure of the complex comprised of ETS1(V170G), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
73.0	9.0	7.0	7.0
0.0	96.0	0.0	0.0
73.0	7.0	7.0	9.0
7.0	7.0	7.0	75.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	9.0	7.0	73.0

#ID = F3D14876
#Short = 3wtv_F
#Long = Runt-related transcription factor 1
#W = 7
#Organisms = Mus musculus
#Description = Crystal structure of the complex comprised of ETS1(V170G), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
8.0	0.0	8.0	80.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
17.0	54.0	17.0	8.0
17.0	8.0	19.0	52.0

#ID = F3D14877
#Short = 3wtw_AC
#Long = Runt-related transcription factor 1
#W = 10
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal structure of the complex comprised of ETS1(K167A), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
73.0	7.0	7.0	9.0
0.0	96.0	0.0	0.0
75.0	7.0	7.0	7.0
7.0	7.0	7.0	75.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	7.0	7.0	75.0

#ID = F3D14878
#Short = 3wtx_AC
#Long = Runt-related transcription factor 1
#W = 10
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal structure of the complex comprised of ETS1(Y329A), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
7.0	7.0	73.0	9.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
73.0	7.0	9.0	7.0
0.0	96.0	0.0	0.0
88.0	1.0	7.0	0.0
7.0	0.0	7.0	82.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
7.0	7.0	7.0	75.0

#ID = F3D14879
#Short = 3wty_AC
#Long = Runt-related transcription factor 1
#W = 10
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal structure of the complex comprised of ETS1(G333P), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
6.0	6.0	75.0	9.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
75.0	6.0	9.0	6.0
0.0	96.0	0.0	0.0
75.0	6.0	9.0	6.0
0.0	7.0	0.0	89.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
6.0	9.0	6.0	75.0

#ID = F3D14880
#Short = 3wty_F
#Long = Runt-related transcription factor 1
#W = 6
#Organisms = Mus musculus
#Description = Crystal structure of the complex comprised of ETS1(G333P), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
11.0	9.0	9.0	67.0
0.0	0.0	96.0	0.0
9.0	11.0	9.0	67.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
9.0	69.0	9.0	9.0

#ID = F3D14881
#Short = 3wu1_A
#Long = Runt-related transcription factor 1
#W = 8
#Organisms = Mus musculus
#Description = Crystal structure of the ETS1-RUNX1-DNA ternary complex
8.0	8.0	11.0	69.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
1.0	87.0	0.0	8.0
8.0	11.0	8.0	69.0
8.0	8.0	11.0	69.0

#ID = F3D14882
#Short = 3wu1_AB
#Long = Runt-related transcription factor 1
#W = 12
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal structure of the ETS1-RUNX1-DNA ternary complex
72.0	8.0	8.0	8.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
8.0	80.0	0.0	8.0
8.0	8.0	8.0	72.0
8.0	8.0	8.0	72.0

#ID = F3D14883
#Short = 3zhm_A
#Long = CI
#W = 6
#Organisms = Lactococcus phage TP901-1
#Description = N-terminal domain of the CI repressor from bacteriophage TP901-1 in complex with the OL2 operator half-site
4.0	83.0	4.0	5.0
4.0	4.0	4.0	84.0
0.0	0.0	96.0	0.0
45.0	15.0	16.0	20.0
56.0	16.0	4.0	20.0
0.0	96.0	0.0	0.0

#ID = F3D14884
#Short = 3zkc_AB
#Long = HTH-TYPE TRANSCRIPTIONAL REGULATOR SINR
#W = 15
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of the master regulator for biofilm formation SinR in complex with DNA.
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
9.0	14.0	14.0	59.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	14.0	72.0	10.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
86.0	10.0	0.0	0.0
62.0	9.0	11.0	14.0
19.0	67.0	4.0	6.0

#ID = F3D14885
#Short = 3zp5_A
#Long = PROTEIN FEV
#W = 6
#Organisms = Homo sapiens
#Description = Crystal structure of the DNA binding ETS domain of the human protein FEV in complex with DNA
16.0	16.0	16.0	48.0
24.0	24.0	24.0	24.0
16.0	0.0	16.0	64.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14886
#Short = 3zpl_AB
#Long = PUTATIVE MARR-FAMILY TRANSCRIPTIONAL REPRESSOR
#W = 20
#Organisms = Streptomyces coelicolor
#Description = Crystal structure of Sco3205, a MarR family transcriptional regulator from Streptomyces coelicolor, in complex with DNA
83.0	5.0	4.0	4.0
96.0	0.0	0.0	0.0
4.0	4.0	88.0	0.0
70.0	8.0	10.0	8.0
4.0	4.0	5.0	83.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
4.0	5.0	4.0	83.0
5.0	75.0	8.0	8.0
0.0	0.0	0.0	96.0
4.0	5.0	4.0	83.0

#ID = F3D14887
#Short = 3zpl_B
#Long = PUTATIVE MARR-FAMILY TRANSCRIPTIONAL REPRESSOR
#W = 8
#Organisms = Streptomyces coelicolor
#Description = Crystal structure of Sco3205, a MarR family transcriptional regulator from Streptomyces coelicolor, in complex with DNA
73.0	7.0	7.0	9.0
96.0	0.0	0.0	0.0
9.0	7.0	73.0	7.0
73.0	7.0	7.0	9.0
7.0	7.0	9.0	73.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14888
#Short = 3zpl_EF
#Long = PUTATIVE MARR-FAMILY TRANSCRIPTIONAL REPRESSOR
#W = 20
#Organisms = Streptomyces coelicolor
#Description = Crystal structure of Sco3205, a MarR family transcriptional regulator from Streptomyces coelicolor, in complex with DNA
86.0	4.0	3.0	3.0
96.0	0.0	0.0	0.0
12.0	4.0	74.0	6.0
69.0	6.0	9.0	12.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
14.0	12.0	12.0	58.0
6.0	68.0	10.0	12.0
0.0	0.0	0.0	96.0
3.0	4.0	3.0	86.0

#ID = F3D14889
#Short = 3zql_AB
#Long = PUTATIVE REPRESSOR SIMREG2
#W = 15
#Organisms = Streptomyces antibioticus
#Description = DNA-BOUND FORM OF TETR-LIKE REPRESSOR SIMR
4.0	3.0	3.0	86.0
0.0	83.0	7.0	6.0
3.0	6.0	86.0	1.0
7.0	3.0	6.0	80.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
3.0	83.0	7.0	3.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
90.0	0.0	3.0	3.0
6.0	77.0	6.0	7.0
0.0	30.0	58.0	8.0
96.0	0.0	0.0	0.0

#ID = F3D14890
#Short = 3zql_B
#Long = PUTATIVE REPRESSOR SIMREG2
#W = 8
#Organisms = Streptomyces antibioticus
#Description = DNA-BOUND FORM OF TETR-LIKE REPRESSOR SIMR
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
11.0	9.0	67.0	9.0
69.0	9.0	9.0	9.0
69.0	9.0	9.0	9.0

#ID = F3D14891
#Short = 3zql_CD
#Long = PUTATIVE REPRESSOR SIMREG2
#W = 16
#Organisms = Streptomyces antibioticus
#Description = DNA-BOUND FORM OF TETR-LIKE REPRESSOR SIMR
0.0	0.0	0.0	96.0
2.0	90.0	2.0	2.0
12.0	12.0	70.0	2.0
12.0	12.0	7.0	65.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
2.0	4.0	88.0	2.0
24.0	24.0	24.0	24.0
2.0	88.0	2.0	4.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
85.0	2.0	7.0	2.0
4.0	88.0	2.0	2.0
0.0	3.0	93.0	0.0
94.0	0.0	0.0	2.0
77.0	12.0	5.0	2.0

#ID = F3D14892
#Short = 4a04_AB
#Long = T-BOX TRANSCRIPTION FACTOR TBX1
#W = 18
#Organisms = Homo sapiens
#Description = Structure of the DNA-bound T-box domain of human TBX1, a transcription factor associated with the DiGeorge syndrome.
4.0	1.0	1.0	90.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
3.0	80.0	8.0	5.0
11.0	65.0	11.0	9.0
24.0	24.0	24.0	24.0
61.0	13.0	15.0	7.0
7.0	7.0	67.0	15.0
7.0	3.0	69.0	17.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
93.0	1.0	1.0	1.0

#ID = F3D14893
#Short = 4aa6_AB
#Long = ESTROGEN RECEPTOR
#W = 13
#Organisms = Homo sapiens
#Description = THE OESTROGEN RECEPTOR RECOGNIZES AN IMPERFECTLY PALINDROMIC RESPONSE ELEMENT THROUGH AN ALTERNATIVE SIDE-CHAIN CONFORMATION
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
6.0	0.0	6.0	84.0
0.0	96.0	0.0	0.0
66.0	6.0	12.0	12.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
72.0	12.0	6.0	6.0
0.0	96.0	0.0	0.0
0.0	72.0	0.0	24.0

#ID = F3D14894
#Short = 4aa6_E
#Long = ESTROGEN RECEPTOR
#W = 6
#Organisms = Homo sapiens
#Description = THE OESTROGEN RECEPTOR RECOGNIZES AN IMPERFECTLY PALINDROMIC RESPONSE ELEMENT THROUGH AN ALTERNATIVE SIDE-CHAIN CONFORMATION
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
13.0	13.0	13.0	57.0
13.0	13.0	16.0	54.0

#ID = F3D14895
#Short = 4aa6_EF
#Long = ESTROGEN RECEPTOR
#W = 13
#Organisms = Homo sapiens
#Description = THE OESTROGEN RECEPTOR RECOGNIZES AN IMPERFECTLY PALINDROMIC RESPONSE ELEMENT THROUGH AN ALTERNATIVE SIDE-CHAIN CONFORMATION
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
73.0	7.0	9.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
7.0	7.0	9.0	73.0
0.0	0.0	96.0	0.0
73.0	7.0	9.0	7.0
0.0	96.0	0.0	0.0
7.0	9.0	7.0	73.0

#ID = F3D14896
#Short = 4aij_AB
#Long = TRANSCRIPTIONAL REGULATOR SLYA
#W = 13
#Organisms = strain YPIII,Yersinia pseudotuberculosis,Yersinia pseudotuberculosis serotype O:3
#Description = Crystal structure of RovA from Yersinia in complex with a rovA promoter fragment
9.0	9.0	9.0	69.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
69.0	9.0	9.0	9.0
67.0	11.0	9.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14897
#Short = 4aij_B
#Long = TRANSCRIPTIONAL REGULATOR SLYA
#W = 4
#Organisms = strain YPIII,Yersinia pseudotuberculosis,Yersinia pseudotuberculosis serotype O:3
#Description = Crystal structure of RovA from Yersinia in complex with a rovA promoter fragment
7.0	7.0	7.0	75.0
7.0	9.0	7.0	73.0
7.0	73.0	9.0	7.0
75.0	7.0	7.0	7.0

#ID = F3D14898
#Short = 4aik_A
#Long = TRANSCRIPTIONAL REGULATOR SLYA
#W = 7
#Organisms = strain YPIII,Yersinia pseudotuberculosis,Yersinia pseudotuberculosis serotype O:3
#Description = Crystal structure of RovA from Yersinia in complex with an invasin promoter fragment
9.0	69.0	9.0	9.0
67.0	9.0	11.0	9.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
67.0	11.0	9.0	9.0
96.0	0.0	0.0	0.0

#ID = F3D14899
#Short = 4ati_AB
#Long = MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR
#W = 9
#Organisms = Mus musculus
#Description = MITF:M-box complex
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
69.0	9.0	9.0	9.0
0.0	0.0	0.0	96.0
11.0	9.0	67.0	9.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
11.0	67.0	9.0	9.0
0.0	0.0	0.0	96.0

#ID = F3D14900
#Short = 4atk_AB
#Long = MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR
#W = 9
#Organisms = Mus musculus
#Description = MITF:E-box complex
67.0	9.0	9.0	11.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
67.0	9.0	11.0	9.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
9.0	67.0	9.0	11.0

#ID = F3D14901
#Short = 4auw_AB
#Long = TRANSCRIPTION FACTOR MAFB
#W = 17
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF THE BZIP HOMODIMERIC MAFB IN COMPLEX WITH THE C- MARE BINDING SITE
0.0	0.0	0.0	96.0
91.0	0.0	5.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
5.0	73.0	7.0	11.0
16.0	11.0	13.0	56.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
56.0	11.0	18.0	11.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
86.0	5.0	5.0	0.0

#ID = F3D14902
#Short = 4awl_A
#Long = NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHA
#W = 6
#Organisms = Homo sapiens
#Description = The NF-Y transcription factor is structurally and functionally a sequence specific histone
9.0	9.0	9.0	69.0
9.0	9.0	69.0	9.0
67.0	9.0	11.0	9.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0

#ID = F3D14903
#Short = 4bhk_A
#Long = FLORICAULA/LEAFY HOMOLOG 1
#W = 7
#Organisms = Moss,Physcomitrella patens,Physcomitrella patens subsp. patens
#Description = Crystal Structure of Moss Leafy bound to DNA
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
67.0	0.0	28.0	1.0
30.0	39.0	11.0	16.0
0.0	0.0	96.0	0.0
25.0	16.0	50.0	5.0
0.0	17.0	0.0	79.0

#ID = F3D14904
#Short = 4bhk_AB
#Long = FLORICAULA/LEAFY HOMOLOG 1
#W = 18
#Organisms = Moss,Physcomitrella patens,Physcomitrella patens subsp. patens
#Description = Crystal Structure of Moss Leafy bound to DNA
6.0	6.0	75.0	9.0
4.0	1.0	91.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
7.0	0.0	77.0	12.0
79.0	8.0	5.0	4.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
64.0	0.0	32.0	0.0
39.0	50.0	5.0	2.0
0.0	0.0	96.0	0.0
8.0	18.0	58.0	12.0
1.0	14.0	2.0	79.0

#ID = F3D14905
#Short = 4bqa_ADG
#Long = PROTEIN C-ETS-2
#W = 25
#Organisms = Homo sapiens
#Description = Crystal structure of the ETS domain of human ETS2 in complex with DNA
4.0	4.0	6.0	82.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	91.0	1.0	4.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
82.0	4.0	6.0	4.0
10.0	4.0	78.0	4.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	74.0	8.0	6.0
6.0	4.0	4.0	82.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
6.0	4.0	82.0	4.0

#ID = F3D14906
#Short = 4cn2_C
#Long = RETINOIC ACID RECEPTOR RXR-ALPHA
#W = 5
#Organisms = Homo sapiens
#Description = Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human Ramp2 Response Element
0.0	0.0	96.0	0.0
0.0	0.0	74.0	22.0
21.0	10.0	12.0	53.0
0.0	96.0	0.0	0.0
64.0	0.0	11.0	21.0

#ID = F3D14907
#Short = 4cn2_CD
#Long = RETINOIC ACID RECEPTOR RXR-ALPHA
#W = 12
#Organisms = Homo sapiens
#Description = Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human Ramp2 Response Element
0.0	0.0	96.0	0.0
0.0	0.0	74.0	22.0
11.0	5.0	13.0	67.0
0.0	96.0	0.0	0.0
79.0	5.0	1.0	11.0
24.0	24.0	24.0	24.0
16.0	8.0	67.0	5.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	5.0	0.0	91.0
0.0	96.0	0.0	0.0
84.0	5.0	0.0	7.0

#ID = F3D14908
#Short = 4cn3_AD
#Long = RETINOIC ACID RECEPTOR RXR-ALPHA
#W = 12
#Organisms = Homo sapiens
#Description = Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human Gde1SpA Response Element
6.0	6.0	8.0	76.0
0.0	0.0	96.0	0.0
84.0	0.0	12.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
14.0	57.0	6.0	19.0
24.0	24.0	24.0	24.0
8.0	12.0	6.0	70.0
0.0	0.0	96.0	0.0
89.0	0.0	6.0	1.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14909
#Short = 4cn3_BC
#Long = RETINOIC ACID RECEPTOR RXR-ALPHA
#W = 12
#Organisms = Homo sapiens
#Description = Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human Gde1SpA Response Element
7.0	9.0	4.0	76.0
0.0	0.0	96.0	0.0
78.0	9.0	9.0	0.0
20.0	76.0	0.0	0.0
0.0	96.0	0.0	0.0
9.0	19.0	6.0	62.0
24.0	24.0	24.0	24.0
4.0	0.0	0.0	92.0
0.0	0.0	96.0	0.0
72.0	6.0	9.0	9.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14910
#Short = 4cn3_D
#Long = RETINOIC ACID RECEPTOR RXR-ALPHA
#W = 5
#Organisms = Homo sapiens
#Description = Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human Gde1SpA Response Element
13.0	13.0	13.0	57.0
0.0	0.0	96.0	0.0
54.0	13.0	13.0	16.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14911
#Short = 4cn5_A
#Long = RETINOIC ACID RECEPTOR RXR-ALPHA
#W = 6
#Organisms = Homo sapiens
#Description = Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human Nr1d1 Response Element
9.0	11.0	9.0	67.0
0.0	0.0	96.0	0.0
67.0	11.0	9.0	9.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
11.0	67.0	9.0	9.0

#ID = F3D14912
#Short = 4cn5_AB
#Long = RETINOIC ACID RECEPTOR RXR-ALPHA
#W = 13
#Organisms = Homo sapiens
#Description = Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human Nr1d1 Response Element
7.0	5.0	5.0	79.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
5.0	28.0	5.0	58.0
24.0	24.0	24.0	24.0
11.0	5.0	7.0	73.0
0.0	0.0	96.0	0.0
79.0	5.0	12.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
1.0	79.0	11.0	5.0

#ID = F3D14913
#Short = 4cn7_F
#Long = RETINOIC ACID RECEPTOR RXR-ALPHA
#W = 6
#Organisms = Homo sapiens
#Description = Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to an idealized DR1 Response Element
0.0	8.0	19.0	69.0
0.0	0.0	96.0	0.0
52.0	17.0	17.0	10.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
8.0	17.0	10.0	61.0

#ID = F3D14914
#Short = 4cyc_A
#Long = HOMEOTIC PROTEIN ULTRABITHORAX
#W = 4
#Organisms = Drosophila melanogaster
#Description = CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING THE HEXAPEPTIDE AND UBDA MOTIFS
20.0	19.0	19.0	38.0
0.0	20.0	0.0	76.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D14915
#Short = 4cyc_AB
#Long = HOMEOTIC PROTEIN ULTRABITHORAX
#W = 8
#Organisms = Drosophila melanogaster
#Description = CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING THE HEXAPEPTIDE AND UBDA MOTIFS
22.0	14.0	51.0	9.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
53.0	14.0	7.0	22.0
23.0	0.0	7.0	66.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D14916
#Short = 4cyc_B
#Long = HOMEOBOX PROTEIN EXTRADENTICLE
#W = 6
#Organisms = Drosophila melanogaster
#Description = CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING THE HEXAPEPTIDE AND UBDA MOTIFS
8.0	8.0	63.0	17.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
28.0	17.0	8.0	43.0
69.0	8.0	0.0	19.0

#ID = F3D14917
#Short = 4egy_AB
#Long = Arabinose metabolism transcriptional repressor
#W = 10
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal Structure of AraR(DBD) in complex with operator ORA1
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	23.0	3.0	70.0
66.0	5.0	18.0	7.0
1.0	92.0	0.0	3.0
6.0	3.0	84.0	3.0
79.0	7.0	7.0	3.0
57.0	11.0	14.0	14.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14918
#Short = 4egy_B
#Long = Arabinose metabolism transcriptional repressor
#W = 7
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal Structure of AraR(DBD) in complex with operator ORA1
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
8.0	19.0	8.0	61.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	8.0	72.0	8.0
61.0	10.0	17.0	8.0

#ID = F3D14919
#Short = 4egz_AB
#Long = Arabinose metabolism transcriptional repressor
#W = 12
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal Structure of AraR(DBD) in complex with operator ORR3
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
14.0	9.0	7.0	66.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
88.0	0.0	8.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
7.0	29.0	53.0	7.0
66.0	7.0	16.0	7.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14920
#Short = 4egz_B
#Long = Arabinose metabolism transcriptional repressor
#W = 7
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal Structure of AraR(DBD) in complex with operator ORR3
9.0	11.0	9.0	67.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
69.0	9.0	9.0	9.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
9.0	9.0	9.0	69.0

#ID = F3D14921
#Short = 4eot_A
#Long = Transcription factor MafA
#W = 8
#Organisms = Homo sapiens
#Description = Crystal structure of the MafA homodimer bound to the consensus MARE
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	8.0	8.0	80.0
19.0	52.0	17.0	8.0
52.0	8.0	26.0	10.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14922
#Short = 4eot_AB
#Long = Transcription factor MafA
#W = 13
#Organisms = Homo sapiens
#Description = Crystal structure of the MafA homodimer bound to the consensus MARE
13.0	13.0	13.0	57.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
54.0	13.0	13.0	16.0

#ID = F3D14923
#Short = 4euw_A
#Long = Transcription factor SOX-9
#W = 6
#Organisms = Homo sapiens
#Description = Crystal structure of a HMG domain of transcription factor SOX-9 bound to DNA (SOX-9/DNA) from Homo sapiens at 2.77 A resolution
0.0	0.0	0.0	96.0
12.0	72.0	0.0	12.0
84.0	0.0	12.0	0.0
84.0	0.0	12.0	0.0
96.0	0.0	0.0	0.0
12.0	12.0	60.0	12.0

#ID = F3D14924
#Short = 4fth_A
#Long = Transcriptional regulator (NtrC family)
#W = 6
#Organisms = Aquifex aeolicus,strain VF5
#Description = Crystal Structure of NtrC4 DNA-binding domain bound to double-stranded DNA
11.0	9.0	9.0	67.0
0.0	0.0	0.0	96.0
9.0	9.0	9.0	69.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
67.0	9.0	11.0	9.0

#ID = F3D14925
#Short = 4fth_AB
#Long = Transcriptional regulator (NtrC family)
#W = 15
#Organisms = Aquifex aeolicus,strain VF5
#Description = Crystal Structure of NtrC4 DNA-binding domain bound to double-stranded DNA
11.0	7.0	11.0	67.0
0.0	0.0	0.0	96.0
5.0	7.0	5.0	79.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
79.0	5.0	5.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
11.0	11.0	7.0	67.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
84.0	5.0	7.0	0.0

#ID = F3D14926
#Short = 4fx4_AB
#Long = PROBABLE TRANSCRIPTIONAL REPRESSOR PROTEIN
#W = 17
#Organisms = Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
#Description = Crystal structure of M. tuberculosis transcriptional regulator MOSR (Rv1049) in compex with DNA
69.0	5.0	10.0	12.0
5.0	10.0	12.0	69.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
60.0	10.0	21.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	5.0	5.0	81.0
90.0	6.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14927
#Short = 4fx4_B
#W = 9
67.0	9.0	9.0	11.0
9.0	9.0	9.0	69.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
67.0	11.0	9.0	9.0

#ID = F3D14928
#Short = 4g92_A
#Long = HAPB protein
#W = 6
#Organisms = Emericella nidulans
#Description = CCAAT-binding complex from Aspergillus nidulans with DNA
7.0	7.0	75.0	7.0
73.0	7.0	9.0	7.0
0.0	1.0	7.0	88.0
0.0	0.0	0.0	96.0
0.0	7.0	81.0	8.0
9.0	7.0	73.0	7.0

#ID = F3D14929
#Short = 4gzn_C
#Long = Zinc finger protein 57
#W = 7
#Organisms = Mus musculus
#Description = Mouse ZFP57 zinc fingers in complex with methylated DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
9.0	67.0	9.0	11.0
11.0	9.0	67.0	9.0
0.0	96.0	0.0	0.0
67.0	9.0	9.0	11.0

#ID = F3D14930
#Short = 4h0e_AB
#Long = Arabinose metabolism transcriptional repressor
#W = 10
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal Structure of mutant ORR3 in complex with NTD of AraR
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
8.0	15.0	8.0	65.0
56.0	13.0	14.0	13.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
8.0	19.0	56.0	13.0
69.0	4.0	15.0	8.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14931
#Short = 4h0e_B
#Long = Arabinose metabolism transcriptional repressor
#W = 8
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal Structure of mutant ORR3 in complex with NTD of AraR
67.0	9.0	9.0	11.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
9.0	9.0	9.0	69.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
9.0	9.0	67.0	11.0

#ID = F3D14932
#Short = 4h10_A
#Long = Aryl hydrocarbon receptor nuclear translocator-lik
#W = 5
#Organisms = Homo sapiens
#Description = Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic Helix-Loop-Helix domains with E-box DNA
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
16.0	54.0	13.0	13.0
16.0	13.0	54.0	13.0

#ID = F3D14933
#Short = 4h10_AB
#Long = Aryl hydrocarbon receptor nuclear translocator-lik
#W = 7
#Organisms = Homo sapiens
#Description = Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic Helix-Loop-Helix domains with E-box DNA
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
2.0	68.0	13.0	13.0
13.0	1.0	82.0	0.0
13.0	13.0	13.0	57.0
0.0	0.0	96.0	0.0

#ID = F3D14934
#Short = 4h10_B
#Long = Circadian locomoter output cycles protein kaput
#W = 4
#Organisms = Homo sapiens
#Description = Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic Helix-Loop-Helix domains with E-box DNA
13.0	54.0	16.0	13.0
13.0	16.0	54.0	13.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0

#ID = F3D14935
#Short = 4hc7_B
#Long = Trans-acting T-cell-specific transcription factor
#W = 11
#Organisms = Homo sapiens
#Description = Crystal structure of the full DNA binding domain of GATA3-complex 2
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
1.0	7.0	7.0	81.0
0.0	96.0	0.0	0.0
61.0	14.0	7.0	14.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
66.0	14.0	9.0	7.0
0.0	7.0	7.0	82.0

#ID = F3D14936
#Short = 4hc9_A
#Long = Trans-acting T-cell-specific transcription factor
#W = 4
#Organisms = Homo sapiens
#Description = DNA binding by GATA transcription factor-complex 3
0.0	0.0	0.0	96.0
13.0	13.0	57.0	13.0
96.0	0.0	0.0	0.0
13.0	16.0	13.0	54.0

#ID = F3D14937
#Short = 4hca_A
#Long = Trans-acting T-cell-specific transcription factor
#W = 9
#Organisms = Homo sapiens
#Description = DNA binding by GATA transcription factor-complex 1
16.0	8.0	16.0	56.0
8.0	8.0	0.0	80.0
0.0	96.0	0.0	0.0
8.0	0.0	0.0	88.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
64.0	16.0	8.0	8.0

#ID = F3D14938
#Short = 4hn5_AB
#Long = Glucocorticoid receptor
#W = 8
#Organisms = Homo sapiens
#Description = GR DNA Binding Domain - TSLP nGRE Complex
0.0	96.0	0.0	0.0
8.0	69.0	11.0	8.0
24.0	24.0	24.0	24.0
19.0	8.0	61.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	8.0	69.0	11.0
0.0	96.0	0.0	0.0

#ID = F3D14939
#Short = 4hn6_AB
#Long = Glucocorticoid receptor
#W = 14
#Organisms = Homo sapiens
#Description = GR DNA Binding Domain R460D/D462R - TSLP nGRE Complex
7.0	79.0	7.0	3.0
3.0	1.0	0.0	92.0
11.0	59.0	13.0	13.0
7.0	7.0	13.0	69.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
19.0	36.0	20.0	21.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14940
#Short = 4i2o_AB
#Long = FixK2 protein
#W = 17
#Organisms = Bradyrhizobium japonicum
#Description = The Structure of FixK2 from Bradyrhizobium japonicum
0.0	16.0	75.0	5.0
5.0	6.0	69.0	16.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
16.0	17.0	10.0	53.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
10.0	5.0	12.0	69.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14941
#Short = 4ihs_B
#Long = HTH-type transcriptional regulator BenM
#W = 9
#Organisms = Acinetobacter baylyi,Acinetobacter sp. ADP1,strain ATCC 33305 / BD413 / ADP1
#Description = Crystal Structure of BenM_DBD/catB site 1 DNA Complex
6.0	4.0	82.0	4.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
68.0	9.0	15.0	4.0
0.0	0.0	0.0	96.0
82.0	6.0	4.0	4.0
18.0	4.0	4.0	70.0
91.0	0.0	5.0	0.0
77.0	6.0	4.0	9.0

#ID = F3D14942
#Short = 4iht_CD
#Long = HTH-type transcriptional regulator BenM
#W = 16
#Organisms = Acinetobacter baylyi,Acinetobacter sp. ADP1,strain ATCC 33305 / BD413 / ADP1
#Description = Crystal Structure of BenM_DBD/benA site 1 DNA Complex
96.0	0.0	0.0	0.0
9.0	6.0	9.0	72.0
89.0	3.0	3.0	1.0
4.0	68.0	3.0	21.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
74.0	0.0	21.0	1.0
0.0	0.0	96.0	0.0
3.0	4.0	3.0	86.0
77.0	9.0	7.0	3.0
0.0	0.0	0.0	96.0
10.0	9.0	3.0	74.0

#ID = F3D14943
#Short = 4ihv_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)
#Description = Crystal structure of Fis bound to 27 bp sequence DNA F28 (AAATTTGTTTGAGCGTTGAGCAAATTT)
3.0	3.0	0.0	90.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	23.0	6.0	59.0
76.0	6.0	6.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	82.0	3.0	5.0
86.0	3.0	4.0	3.0
24.0	24.0	24.0	24.0
76.0	9.0	5.0	6.0
0.0	96.0	0.0	0.0
90.0	0.0	3.0	3.0

#ID = F3D14944
#Short = 4ihw_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)
#Description = Crystal structure of Fis bound to 27 bp Inosine substituted DNA F28-dI (AAATTTGTTTGAICITTGAGCAAATTT)
5.0	2.0	5.0	84.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
2.0	33.0	2.0	59.0
90.0	2.0	2.0	2.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
18.0	53.0	11.0	14.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
50.0	25.0	5.0	16.0
0.0	96.0	0.0	0.0
90.0	2.0	4.0	0.0

#ID = F3D14945
#Short = 4ihw_B
#Long = DNA-binding protein fis
#W = 6
#Organisms = Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)
#Description = Crystal structure of Fis bound to 27 bp Inosine substituted DNA F28-dI (AAATTTGTTTGAICITTGAGCAAATTT)
8.0	69.0	11.0	8.0
63.0	17.0	8.0	8.0
24.0	24.0	24.0	24.0
69.0	11.0	8.0	8.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14946
#Short = 4ihx_AB
#Long = DNA-binding protein fis
#W = 15
#Organisms = Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)
#Description = Crystal structure of Fis bound to 27 bp 2-Aminopurine substituted DNA F28-2AP (AAATTTGTTTGA2T2TTGAGCAAATTT)
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
5.0	81.0	5.0	5.0
24.0	24.0	24.0	24.0
5.0	79.0	5.0	7.0
90.0	0.0	0.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	79.0	7.0	5.0
79.0	5.0	7.0	5.0
79.0	7.0	5.0	5.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14947
#Short = 4ihx_B
#Long = DNA-binding protein fis
#W = 5
#Organisms = Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)
#Description = Crystal structure of Fis bound to 27 bp 2-Aminopurine substituted DNA F28-2AP (AAATTTGTTTGA2T2TTGAGCAAATTT)
9.0	67.0	11.0	9.0
67.0	9.0	11.0	9.0
69.0	9.0	9.0	9.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14948
#Short = 4ihy_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)
#Description = Crystal structure of Fis bound to 27bp Inosine substituted DNA F29-dI (AAATTTGTTTGIICICTGAGCAAATTT)
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
3.0	84.0	6.0	3.0
24.0	24.0	24.0	24.0
3.0	24.0	3.0	66.0
87.0	3.0	3.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	87.0	3.0	3.0
57.0	18.0	12.0	9.0
24.0	24.0	24.0	24.0
78.0	6.0	6.0	6.0
0.0	96.0	0.0	0.0
87.0	3.0	3.0	3.0

#ID = F3D14949
#Short = 4ihy_B
#Long = DNA-binding protein fis
#W = 6
#Organisms = Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)
#Description = Crystal structure of Fis bound to 27bp Inosine substituted DNA F29-dI (AAATTTGTTTGIICICTGAGCAAATTT)
9.0	69.0	9.0	9.0
67.0	11.0	9.0	9.0
24.0	24.0	24.0	24.0
67.0	11.0	9.0	9.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14950
#Short = 4iqr_AB
#Long = Hepatocyte nuclear factor 4-alpha
#W = 11
#Organisms = Homo sapiens
#Description = Multi-Domain Organization of the HNF4alpha Nuclear Receptor Complex on DNA
0.0	0.0	96.0	0.0
50.0	15.0	15.0	16.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
10.0	15.0	11.0	60.0
24.0	24.0	24.0	24.0
5.0	6.0	5.0	80.0
24.0	24.0	24.0	24.0
56.0	15.0	10.0	15.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14951
#Short = 4iqr_E
#Long = Hepatocyte nuclear factor 4-alpha
#W = 5
#Organisms = Homo sapiens
#Description = Multi-Domain Organization of the HNF4alpha Nuclear Receptor Complex on DNA
0.0	0.0	0.0	96.0
9.0	9.0	69.0	9.0
67.0	11.0	9.0	9.0
0.0	96.0	0.0	0.0
9.0	69.0	9.0	9.0

#ID = F3D14952
#Short = 4is1_C
#Long = Zinc finger protein 217
#W = 7
#Organisms = Homo sapiens
#Description = Crystal structure of ZNF217 bound to DNA
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
10.0	0.0	1.0	85.0
0.0	0.0	96.0	0.0
21.0	53.0	12.0	10.0
53.0	10.0	21.0	12.0

#ID = F3D14953
#Short = 4is1_CD
#Long = Zinc finger protein 217
#W = 18
#Organisms = Homo sapiens
#Description = Crystal structure of ZNF217 bound to DNA
4.0	6.0	6.0	80.0
0.0	1.0	73.0	22.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
84.0	3.0	3.0	6.0
6.0	3.0	7.0	80.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
80.0	3.0	7.0	6.0
0.0	6.0	3.0	87.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
19.0	70.0	4.0	3.0
86.0	6.0	1.0	3.0

#ID = F3D14954
#Short = 4ivz_AF
#Long = Regulatory protein
#W = 15
#Organisms = Enterobacter sp. RFL1396
#Description = A Y37F mutant of C.Esp1396I bound to its highest affinity operator site OM
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
6.0	8.0	76.0	6.0
76.0	6.0	6.0	8.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
66.0	6.0	12.0	12.0
0.0	0.0	96.0	0.0
57.0	12.0	15.0	12.0
0.0	96.0	0.0	0.0

#ID = F3D14955
#Short = 4ivz_F
#Long = Regulatory protein
#W = 7
#Organisms = Enterobacter sp. RFL1396
#Description = A Y37F mutant of C.Esp1396I bound to its highest affinity operator site OM
0.0	0.0	96.0	0.0
9.0	11.0	9.0	67.0
0.0	96.0	0.0	0.0
9.0	9.0	67.0	11.0
67.0	9.0	11.0	9.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14956
#Short = 4iwr_AB
#Long = Regulatory protein
#W = 16
#Organisms = Enterobacter sp. RFL1396
#Description = C.Esp1396I bound to a 25 base pair operator site
16.0	80.0	0.0	0.0
11.0	11.0	62.0	12.0
0.0	0.0	96.0	0.0
62.0	12.0	11.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	84.0	1.0	11.0
75.0	11.0	5.0	5.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14957
#Short = 4iwr_EF
#Long = Regulatory protein
#W = 16
#Organisms = Enterobacter sp. RFL1396
#Description = C.Esp1396I bound to a 25 base pair operator site
0.0	96.0	0.0	0.0
5.0	1.0	90.0	0.0
0.0	0.0	96.0	0.0
67.0	11.0	11.0	7.0
16.0	50.0	19.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	90.0	1.0	5.0
67.0	11.0	5.0	13.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14958
#Short = 4j19_AB
#Long = Homeobox-containing protein 1
#W = 14
#Organisms = Homo sapiens
#Description = Structure of a novel telomere repeat binding protein bound to DNA
4.0	87.0	5.0	0.0
4.0	4.0	0.0	88.0
82.0	6.0	4.0	4.0
96.0	0.0	0.0	0.0
8.0	82.0	2.0	4.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	5.0	0.0	91.0
96.0	0.0	0.0	0.0
87.0	1.0	4.0	4.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
8.0	78.0	6.0	4.0
8.0	69.0	4.0	15.0

#ID = F3D14959
#Short = 4j19_B
#Long = Homeobox-containing protein 1
#W = 8
#Organisms = Homo sapiens
#Description = Structure of a novel telomere repeat binding protein bound to DNA
0.0	96.0	0.0	0.0
0.0	10.0	0.0	86.0
96.0	0.0	0.0	0.0
86.0	0.0	0.0	10.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
11.0	57.0	9.0	19.0
9.0	59.0	9.0	19.0

#ID = F3D14960
#Short = 4j2x_C
#Long = Recombining binding protein suppressor of hairless
#W = 8
#Organisms = Mus musculus
#Description = CSL (RBP-Jk) with corepressor KyoT2 bound to DNA
7.0	7.0	9.0	73.0
14.0	7.0	68.0	7.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
1.0	7.0	81.0	7.0
96.0	0.0	0.0	0.0
66.0	9.0	14.0	7.0

#ID = F3D14961
#Short = 4jcx_A
#Long = Csp231I C protein
#W = 6
#Organisms = Citrobacter sp. RFL231
#Description = Crystal structure of the Restriction-Modification Controller Protein C.Csp231I OL operator complex
17.0	52.0	19.0	8.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
17.0	19.0	17.0	43.0
78.0	8.0	0.0	10.0
0.0	0.0	96.0	0.0

#ID = F3D14962
#Short = 4jcx_AB
#Long = Csp231I C protein
#W = 15
#Organisms = Citrobacter sp. RFL231
#Description = Crystal structure of the Restriction-Modification Controller Protein C.Csp231I OL operator complex
0.0	87.0	0.0	9.0
8.0	8.0	11.0	69.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
8.0	11.0	8.0	69.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
69.0	8.0	11.0	8.0
0.0	0.0	96.0	0.0

#ID = F3D14963
#Short = 4jcy_A
#Long = Csp231I C protein
#W = 7
#Organisms = Citrobacter sp. RFL231
#Description = Crystal structure of the Restriction-Modification Controller Protein C.Csp231I OR operator complex
3.0	3.0	4.0	86.0
4.0	86.0	3.0	3.0
0.0	0.0	0.0	96.0
0.0	19.0	3.0	74.0
49.0	14.0	15.0	18.0
18.0	0.0	78.0	0.0
3.0	19.0	3.0	71.0

#ID = F3D14964
#Short = 4jcy_AB
#Long = Csp231I C protein
#W = 16
#Organisms = Citrobacter sp. RFL231
#Description = Crystal structure of the Restriction-Modification Controller Protein C.Csp231I OR operator complex
0.0	93.0	1.0	2.0
2.0	2.0	2.0	90.0
79.0	2.0	11.0	4.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
73.0	2.0	10.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
2.0	2.0	5.0	87.0
2.0	87.0	5.0	2.0
0.0	0.0	0.0	96.0
2.0	16.0	5.0	73.0
87.0	2.0	2.0	5.0
0.0	0.0	96.0	0.0
5.0	2.0	2.0	87.0

#ID = F3D14965
#Short = 4jqd_AB
#Long = Csp231I C protein
#W = 15
#Organisms = Citrobacter sp. RFL231
#Description = Crystal structure of the Restriction-Modification Controller Protein C.Csp231I OL operator complex
0.0	96.0	0.0	0.0
9.0	9.0	6.0	72.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
3.0	9.0	75.0	9.0
12.0	9.0	9.0	66.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
19.0	59.0	9.0	9.0
12.0	62.0	13.0	9.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0

#ID = F3D14966
#Short = 4jqd_E
#Long = Csp231I C protein
#W = 6
#Organisms = Citrobacter sp. RFL231
#Description = Crystal structure of the Restriction-Modification Controller Protein C.Csp231I OL operator complex
0.0	96.0	0.0	0.0
8.0	0.0	1.0	87.0
69.0	8.0	8.0	11.0
96.0	0.0	0.0	0.0
8.0	8.0	69.0	11.0
11.0	8.0	8.0	69.0

#ID = F3D14967
#Short = 4kfc_AB
#Long = KDP operon transcriptional regulatory protein KdpE
#W = 18
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of a hyperactive mutant of response regulator KdpE complexed to its promoter DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
83.0	1.0	11.0	1.0
58.0	7.0	18.0	13.0
61.0	7.0	13.0	15.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
66.0	8.0	15.0	7.0
96.0	0.0	0.0	0.0
84.0	1.0	0.0	11.0
83.0	1.0	1.0	11.0

#ID = F3D14968
#Short = 4kfc_B
#Long = KDP operon transcriptional regulatory protein KdpE
#W = 5
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of a hyperactive mutant of response regulator KdpE complexed to its promoter DNA
0.0	0.0	0.0	96.0
8.0	11.0	69.0	8.0
8.0	8.0	11.0	69.0
96.0	0.0	0.0	0.0
61.0	17.0	8.0	10.0

#ID = F3D14969
#Short = 4kny_AB
#Long = KDP operon transcriptional regulatory protein KdpE
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of the response regulator KdpE complexed to DNA in an active-like conformation
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
6.0	9.0	6.0	75.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
61.0	16.0	13.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
68.0	0.0	15.0	13.0
82.0	6.0	6.0	2.0

#ID = F3D14970
#Short = 4l0y_AB
#Long = Runt-related transcription factor 1
#W = 12
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 1)
79.0	7.0	5.0	5.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
5.0	7.0	5.0	79.0
0.0	0.0	96.0	0.0
5.0	7.0	5.0	79.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	90.0	0.0	6.0
5.0	5.0	7.0	79.0
5.0	7.0	5.0	79.0

#ID = F3D14971
#Short = 4l0y_B
#Long = Protein C-ets-1
#W = 6
#Organisms = Homo sapiens
#Description = Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 1)
54.0	16.0	13.0	13.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
16.0	13.0	54.0	13.0

#ID = F3D14972
#Short = 4l0z_AB
#Long = Runt-related transcription factor 1
#W = 12
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 2)
78.0	6.0	6.0	6.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
12.0	60.0	12.0	12.0
12.0	6.0	12.0	66.0
6.0	0.0	0.0	90.0

#ID = F3D14973
#Short = 4l0z_B
#Long = Protein C-ets-1
#W = 4
#Organisms = Homo sapiens
#Description = Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 2)
39.0	19.0	19.0	19.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
76.0	0.0	20.0	0.0

#ID = F3D14974
#Short = 4l18_AB
#Long = Runt-related transcription factor 1
#W = 12
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 3)
67.0	9.0	11.0	9.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
9.0	67.0	11.0	9.0
9.0	2.0	9.0	76.0
9.0	1.0	0.0	86.0

#ID = F3D14975
#Short = 4l18_E
#Long = Runt-related transcription factor 1
#W = 8
#Organisms = Mus musculus
#Description = Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 3)
6.0	8.0	6.0	76.0
0.0	0.0	96.0	0.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
8.0	76.0	6.0	6.0
0.0	6.0	6.0	84.0
8.0	6.0	6.0	76.0

#ID = F3D14976
#Short = 4l18_EF
#Long = Runt-related transcription factor 1
#W = 12
#Organisms = Mus musculus,Homo sapiens
#Description = Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 3)
81.0	5.0	5.0	5.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
81.0	5.0	5.0	5.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
5.0	5.0	7.0	79.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
7.0	79.0	5.0	5.0
0.0	6.0	0.0	90.0
7.0	5.0	5.0	79.0

#ID = F3D14977
#Short = 4ldx_A
#Long = Auxin response factor 1
#W = 9
#Organisms = Arabidopsis thaliana
#Description = Crystal structure of the DNA binding domain of arabidopsis thaliana auxin response factor 1 (ARF1) in complex with protomor-like sequence ER7
9.0	7.0	7.0	73.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
9.0	7.0	7.0	73.0
24.0	24.0	24.0	24.0
7.0	9.0	7.0	73.0
7.0	73.0	9.0	7.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D14978
#Short = 4ldx_AB
#Long = Auxin response factor 1
#W = 20
#Organisms = Arabidopsis thaliana
#Description = Crystal structure of the DNA binding domain of arabidopsis thaliana auxin response factor 1 (ARF1) in complex with protomor-like sequence ER7
6.0	4.0	4.0	82.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
9.0	73.0	5.0	9.0
4.0	4.0	6.0	82.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	1.0	91.0	0.0
0.0	0.0	96.0	0.0
9.0	9.0	69.0	9.0
86.0	6.0	0.0	4.0
24.0	24.0	24.0	24.0
84.0	4.0	4.0	4.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14979
#Short = 4lg0_AB
#Long = Forkhead box protein O1
#W = 11
#Organisms = Homo sapiens
#Description = Structure of a ternary FOXO1-ETS1 DNA complex
84.0	0.0	6.0	6.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
84.0	0.0	12.0	0.0
12.0	60.0	12.0	12.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
78.0	6.0	6.0	6.0
60.0	12.0	12.0	12.0

#ID = F3D14980
#Short = 4lg0_B
#Long = Protein C-ets-1
#W = 6
#Organisms = Homo sapiens
#Description = Structure of a ternary FOXO1-ETS1 DNA complex
69.0	9.0	9.0	9.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
67.0	9.0	9.0	11.0
67.0	9.0	9.0	11.0

#ID = F3D14981
#Short = 4lll_AB
#Long = MepR
#W = 19
#Organisms = Staphylococcus aureus
#Description = Crystal structure of S. aureus MepR-DNA complex
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
11.0	5.0	8.0	72.0
1.0	1.0	5.0	89.0
96.0	0.0	0.0	0.0
15.0	15.0	63.0	3.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
15.0	53.0	15.0	13.0
0.0	0.0	0.0	96.0
82.0	11.0	0.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
61.0	31.0	1.0	3.0

#ID = F3D14982
#Short = 4lll_CD
#Long = MepR
#W = 19
#Organisms = Staphylococcus aureus
#Description = Crystal structure of S. aureus MepR-DNA complex
0.0	0.0	3.0	93.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	17.0	3.0	63.0
3.0	3.0	5.0	85.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	82.0	3.0	8.0
0.0	0.0	0.0	96.0
85.0	3.0	5.0	3.0
54.0	12.0	17.0	13.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14983
#Short = 4lll_IJ
#Long = MepR
#W = 16
#Organisms = Staphylococcus aureus
#Description = Crystal structure of S. aureus MepR-DNA complex
2.0	2.0	2.0	90.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
2.0	10.0	2.0	82.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
2.0	2.0	88.0	4.0
72.0	10.0	4.0	10.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
18.0	15.0	12.0	51.0
4.0	88.0	2.0	2.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
80.0	4.0	2.0	10.0

#ID = F3D14984
#Short = 4lll_J
#Long = MepR
#W = 4
#Organisms = Staphylococcus aureus
#Description = Crystal structure of S. aureus MepR-DNA complex
13.0	57.0	13.0	13.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
54.0	13.0	16.0	13.0

#ID = F3D14985
#Short = 4lln_AB
#Long = MepR
#W = 21
#Organisms = Staphylococcus aureus
#Description = Crystal structure of S. aureus MepR-DNA complex
13.0	1.0	6.0	76.0
5.0	11.0	2.0	78.0
1.0	1.0	4.0	90.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	1.0	1.0	90.0
1.0	4.0	1.0	90.0
96.0	0.0	0.0	0.0
12.0	9.0	74.0	1.0
90.0	1.0	4.0	1.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	1.0	1.0	90.0
9.0	69.0	7.0	11.0
0.0	0.0	0.0	96.0
90.0	1.0	4.0	1.0
90.0	4.0	1.0	1.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
95.0	0.0	1.0	0.0

#ID = F3D14986
#Short = 4lln_CD
#Long = MepR
#W = 15
#Organisms = Staphylococcus aureus
#Description = Crystal structure of S. aureus MepR-DNA complex
3.0	3.0	3.0	87.0
3.0	3.0	6.0	84.0
96.0	0.0	0.0	0.0
3.0	9.0	81.0	3.0
84.0	3.0	6.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	0.0	3.0	88.0
7.0	71.0	7.0	11.0
0.0	0.0	0.0	96.0
92.0	0.0	1.0	3.0
84.0	6.0	3.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0

#ID = F3D14987
#Short = 4lln_I
#Long = MepR
#W = 9
#Organisms = Staphylococcus aureus
#Description = Crystal structure of S. aureus MepR-DNA complex
0.0	0.0	0.0	96.0
9.0	7.0	7.0	73.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
7.0	7.0	9.0	73.0
9.0	7.0	7.0	73.0
96.0	0.0	0.0	0.0
7.0	7.0	75.0	7.0
96.0	0.0	0.0	0.0

#ID = F3D14988
#Short = 4m9e_A
#Long = Krueppel-like factor 4
#W = 10
#Organisms = Mus musculus
#Description = Structure of Klf4 zinc finger DNA binding domain in complex with methylated DNA
9.0	11.0	67.0	9.0
9.0	67.0	9.0	11.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
11.0	67.0	9.0	9.0

#ID = F3D14989
#Short = 4mhg_A
#Long = Transcription factor ETV6
#W = 6
#Organisms = Mus musculus
#Description = Crystal structure of ETV6 bound to a specific DNA sequence
8.0	5.0	10.0	73.0
14.0	14.0	16.0	52.0
1.0	91.0	3.0	1.0
0.0	96.0	0.0	0.0
16.0	4.0	71.0	5.0
8.0	10.0	67.0	11.0

#ID = F3D14990
#Short = 4mtd_ABCD
#Long = Zinc uptake regulation protein
#W = 20
#Organisms = Escherichia coli (strain K12)
#Description = Zinc Uptake Regulator Complexed With Zinc AND DNA
2.0	5.0	2.0	87.0
0.0	0.0	96.0	0.0
90.0	2.0	0.0	4.0
68.0	5.0	10.0	13.0
76.0	7.0	5.0	8.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
5.0	15.0	5.0	71.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
85.0	7.0	2.0	2.0
0.0	19.0	1.0	76.0
96.0	0.0	0.0	0.0
5.0	7.0	2.0	82.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14991
#Short = 4mtd_B
#Long = Zinc uptake regulation protein
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = Zinc Uptake Regulator Complexed With Zinc AND DNA
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
9.0	9.0	11.0	67.0
67.0	9.0	11.0	9.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
67.0	9.0	9.0	11.0

#ID = F3D14992
#Short = 4mte_ABCD
#Long = Zinc uptake regulation protein
#W = 20
#Organisms = Escherichia coli (strain K12)
#Description = Zinc Uptake Regulator Complexed with Zinc and DNA
3.0	4.0	3.0	86.0
0.0	0.0	96.0	0.0
84.0	3.0	3.0	6.0
24.0	24.0	24.0	24.0
81.0	6.0	6.0	3.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
74.0	10.0	6.0	6.0
1.0	21.0	0.0	74.0
96.0	0.0	0.0	0.0
7.0	6.0	6.0	77.0
11.0	61.0	9.0	15.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14993
#Short = 4mte_D
#Long = Zinc uptake regulation protein
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = Zinc Uptake Regulator Complexed with Zinc and DNA
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	20.0	76.0
19.0	38.0	20.0	19.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14994
#Short = 4nhj_A
#Long = DNA-binding transcriptional regulator RstA
#W = 9
#Organisms = Klebsiella pneumoniae,Klebsiella pneumoniae subsp. pneumoniae,strain ATCC 700721 / MGH 78578
#Description = Crystal structure of Klebsiella pneumoniae RstA DNA-binding domain in complex with RstA box
6.0	6.0	78.0	6.0
64.0	13.0	6.0	13.0
68.0	13.0	2.0	13.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
84.0	6.0	0.0	6.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D14995
#Short = 4nhj_AB
#Long = DNA-binding transcriptional regulator RstA
#W = 16
#Organisms = Klebsiella pneumoniae,Klebsiella pneumoniae subsp. pneumoniae,strain ATCC 700721 / MGH 78578
#Description = Crystal structure of Klebsiella pneumoniae RstA DNA-binding domain in complex with RstA box
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
3.0	30.0	5.0	58.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
10.0	6.0	70.0	10.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
5.0	3.0	6.0	82.0
58.0	22.0	6.0	10.0
0.0	96.0	0.0	0.0
68.0	9.0	6.0	13.0

#ID = F3D14996
#Short = 4nnu_B
#Long = Transcription factor A, mitochondrial
#W = 18
#Organisms = Homo sapiens
#Description = Distinct structural features of TFAM drive mitochondrial DNA packaging versus transcriptional activation
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
13.0	13.0	16.0	54.0
13.0	16.0	13.0	54.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0

#ID = F3D14997
#Short = 4nod_B
#Long = Transcription factor A, mitochondrial
#W = 14
#Organisms = Homo sapiens
#Description = Distinct structural features of TFAM drive mitochondrial DNA packaging versus transcriptional activation
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
9.0	9.0	11.0	67.0
67.0	9.0	11.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	9.0	11.0	67.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D14998
#Short = 4nqa_AB
#Long = Retinoic acid receptor RXR-alpha
#W = 16
#Organisms = Homo sapiens
#Description = Crystal structure of liganded hRXR-alpha/hLXR-beta heterodimer on DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
81.0	4.0	4.0	7.0
0.0	96.0	0.0	0.0
7.0	76.0	4.0	9.0
4.0	7.0	4.0	81.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
84.0	4.0	4.0	4.0
0.0	96.0	0.0	0.0
4.0	84.0	4.0	4.0
4.0	4.0	7.0	81.0

#ID = F3D14999
#Short = 4nqa_HI
#Long = Retinoic acid receptor RXR-alpha
#W = 16
#Organisms = Homo sapiens
#Description = Crystal structure of liganded hRXR-alpha/hLXR-beta heterodimer on DNA
5.0	0.0	3.0	88.0
0.0	0.0	96.0	0.0
79.0	3.0	0.0	14.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
11.0	18.0	51.0	16.0
0.0	0.0	0.0	96.0
7.0	19.0	59.0	11.0
73.0	3.0	14.0	6.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D15000
#Short = 4nqa_I
#Long = Liver X nuclear receptor beta
#W = 6
#Organisms = Homo sapiens
#Description = Crystal structure of liganded hRXR-alpha/hLXR-beta heterodimer on DNA
9.0	9.0	9.0	69.0
0.0	0.0	96.0	0.0
69.0	9.0	9.0	9.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
9.0	9.0	11.0	67.0

#ID = F3D15001
#Short = 4oln_AB
#Long = AncSR1
#W = 13
#Organisms = synthetic construct
#Description = Ancestral Steroid Receptor 1 in complex with estrogen response element DNA
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
64.0	12.0	10.0	10.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
10.0	10.0	12.0	64.0
0.0	0.0	96.0	0.0
74.0	0.0	12.0	10.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D15002
#Short = 4oln_B
#Long = AncSR1
#W = 6
#Organisms = synthetic construct
#Description = Ancestral Steroid Receptor 1 in complex with estrogen response element DNA
24.0	12.0	48.0	12.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
48.0	12.0	24.0	12.0

#ID = F3D15003
#Short = 4omy_A
#Long = NolR
#W = 4
#Organisms = Sinorhizobium fredii
#Description = Crystal Structure of SeMet NolR from Sinorhizobium fredii in complex with oligo AT DNA
11.0	67.0	9.0	9.0
9.0	11.0	9.0	67.0
96.0	0.0	0.0	0.0
67.0	11.0	9.0	9.0

#ID = F3D15004
#Short = 4omy_AB
#Long = NolR
#W = 16
#Organisms = Sinorhizobium fredii
#Description = Crystal Structure of SeMet NolR from Sinorhizobium fredii in complex with oligo AT DNA
5.0	15.0	11.0	65.0
24.0	24.0	24.0	24.0
3.0	0.0	17.0	76.0
4.0	92.0	0.0	0.0
96.0	0.0	0.0	0.0
10.0	7.0	76.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
86.0	7.0	3.0	0.0
61.0	15.0	17.0	3.0

#ID = F3D15005
#Short = 4omy_CD
#Long = NolR
#W = 18
#Organisms = Sinorhizobium fredii
#Description = Crystal Structure of SeMet NolR from Sinorhizobium fredii in complex with oligo AT DNA
96.0	0.0	0.0	0.0
53.0	10.0	23.0	10.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
1.0	85.0	0.0	10.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
53.0	23.0	10.0	10.0
96.0	0.0	0.0	0.0

#ID = F3D15006
#Short = 4on0_AB
#Long = NolR
#W = 19
#Organisms = Sinorhizobium fredii
#Description = Crystal Structure of NolR from Sinorhizobium fredii in complex with oligo AA DNA
6.0	5.0	5.0	80.0
75.0	5.0	10.0	6.0
24.0	24.0	24.0	24.0
0.0	85.0	5.0	6.0
91.0	0.0	5.0	0.0
0.0	0.0	6.0	90.0
5.0	91.0	0.0	0.0
96.0	0.0	0.0	0.0
5.0	5.0	81.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
80.0	6.0	5.0	5.0
96.0	0.0	0.0	0.0

#ID = F3D15007
#Short = 4on0_B
#Long = NolR
#W = 9
#Organisms = Sinorhizobium fredii
#Description = Crystal Structure of NolR from Sinorhizobium fredii in complex with oligo AA DNA
7.0	10.0	5.0	74.0
74.0	5.0	5.0	12.0
24.0	24.0	24.0	24.0
5.0	80.0	5.0	6.0
90.0	0.0	6.0	0.0
5.0	1.0	5.0	85.0
5.0	91.0	0.0	0.0
96.0	0.0	0.0	0.0
5.0	5.0	80.0	6.0

#ID = F3D15008
#Short = 4on0_CD
#Long = NolR
#W = 19
#Organisms = Sinorhizobium fredii
#Description = Crystal Structure of NolR from Sinorhizobium fredii in complex with oligo AA DNA
2.0	19.0	73.0	2.0
60.0	2.0	20.0	14.0
24.0	24.0	24.0	24.0
2.0	92.0	2.0	0.0
96.0	0.0	0.0	0.0
2.0	2.0	3.0	89.0
72.0	20.0	2.0	2.0
96.0	0.0	0.0	0.0
14.0	0.0	82.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
78.0	2.0	14.0	2.0
74.0	18.0	2.0	2.0

#ID = F3D15009
#Short = 4ond_AB
#Long = Ancestral SR2 Helix Mutant
#W = 13
#Organisms = synthetic construct
#Description = Ancestral Steroid Receptor 2 DBD helix mutant - ERE DNA complex
5.0	7.0	5.0	79.0
0.0	0.0	96.0	0.0
5.0	5.0	5.0	81.0
0.0	96.0	0.0	0.0
79.0	5.0	7.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	5.0	5.0	81.0
24.0	24.0	24.0	24.0
73.0	11.0	5.0	7.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D15010
#Short = 4ond_EF
#Long = Ancestral SR2 Helix Mutant
#W = 14
#Organisms = synthetic construct
#Description = Ancestral Steroid Receptor 2 DBD helix mutant - ERE DNA complex
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
2.0	0.0	1.0	93.0
16.0	49.0	17.0	14.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
14.0	15.0	51.0	16.0
81.0	11.0	2.0	2.0
2.0	88.0	2.0	4.0
0.0	96.0	0.0	0.0
2.0	2.0	18.0	74.0

#ID = F3D15011
#Short = 4oor_AB
#Long = Ancestral Steroid Receptor 2 DNA binding domain
#W = 13
#Organisms = synthetic construct
#Description = Ancestral Steroid Receptor 2 DNA binding domain in complex with a steroid response element
11.0	9.0	9.0	67.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
19.0	20.0	9.0	48.0
24.0	24.0	24.0	24.0
20.0	76.0	0.0	0.0

#ID = F3D15012
#Short = 4oor_EF
#Long = Ancestral Steroid Receptor 2 DNA binding domain
#W = 14
#Organisms = synthetic construct
#Description = Ancestral Steroid Receptor 2 DBD helix mutant - SRE DNA complex
8.0	0.0	80.0	8.0
24.0	24.0	24.0	24.0
72.0	8.0	8.0	8.0
0.0	96.0	0.0	0.0
72.0	8.0	8.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
72.0	8.0	8.0	8.0

#ID = F3D15013
#Short = 4ov7_AB
#Long = Ancestral Steroid Receptor 2 DBD helix mutant
#W = 13
#Organisms = synthetic construct
#Description = Ancestral Steroid Receptor 2 DBD helix mutant - SRE DNA complex
9.0	9.0	11.0	67.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
19.0	19.0	10.0	48.0
24.0	24.0	24.0	24.0
19.0	77.0	0.0	0.0

#ID = F3D15014
#Short = 4p9u_B
#Long = Fatty acid metabolism regulator protein
#W = 7
#Organisms = strain ATCC 39315 / El Tor Inaba N16961,Vibrio cholerae,Vibrio cholerae serotype O1
#Description = FadR, Fatty Acid Responsive Transcription Factor from Vibrio cholerae, in Complex with DNA
11.0	8.0	8.0	69.0
0.0	0.0	0.0	96.0
8.0	8.0	72.0	8.0
69.0	8.0	11.0	8.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
87.0	1.0	0.0	8.0

#ID = F3D15015
#Short = 4pu3_C
#Long = Toxin-antitoxin system antidote transcriptional re
#W = 5
#Organisms = Shewanella oneidensis,strain MR-1
#Description = Shewanella oneidensis MR-1 Toxin Antitoxin System HipA, HipB and its operator DNA complex (space group P212121)
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
16.0	54.0	13.0	13.0
0.0	96.0	0.0	0.0
13.0	13.0	13.0	57.0

#ID = F3D15016
#Short = 4pu4_ABCD
#Long = Toxin-antitoxin system antidote transcriptional re
#W = 15
#Organisms = Shewanella oneidensis,strain MR-1
#Description = Shewanella oneidensis MR-1 Toxin Antitoxin System HipA, HipB and its operator DNA complex (space group P21)
3.0	6.0	3.0	84.0
65.0	11.0	9.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
65.0	11.0	9.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
3.0	84.0	3.0	6.0
90.0	3.0	3.0	0.0
0.0	93.0	3.0	0.0
0.0	96.0	0.0	0.0
6.0	3.0	3.0	84.0

#ID = F3D15017
#Short = 4qr9_AB
#Long = High mobility group protein B1
#W = 4
#Organisms = Rattus norvegicus
#Description = Crystal structure of two HMGB1 Box A domains cooperating to underwind and kink a DNA
13.0	13.0	13.0	57.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
54.0	16.0	13.0	13.0

#ID = F3D15018
#Short = 4qtr_CD
#Long = dualENH
#W = 9
#Organisms = Drosophila melanogaster
#Description = Computational design of co-assembling protein-DNA nanowires
54.0	13.0	13.0	16.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
13.0	13.0	13.0	57.0

#ID = F3D15019
#Short = 4r2a_A
#Long = Early growth response protein 1
#W = 10
#Organisms = Homo sapiens
#Description = Egr1/Zif268 zinc fingers in complex with methylated DNA
48.0	12.0	12.0	24.0
0.0	96.0	0.0	0.0
24.0	12.0	48.0	12.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D15020
#Short = 4r2c_A
#Long = Early growth response protein 1
#W = 9
#Organisms = Homo sapiens
#Description = Egr1/Zif268 zinc fingers in complex with hydroxymethylated DNA
39.0	19.0	19.0	19.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	76.0	0.0	20.0

#ID = F3D15021
#Short = 4r2d_A
#Long = Early growth response protein 1
#W = 9
#Organisms = Homo sapiens
#Description = Egr1/Zif268 zinc fingers in complex with formylated DNA
69.0	9.0	9.0	9.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
9.0	67.0	9.0	11.0
0.0	0.0	96.0	0.0
9.0	67.0	9.0	11.0

#ID = F3D15022
#Short = 4r2p_A
#Long = Wilms tumor protein, isoform 4/CRA_a
#W = 9
#Organisms = Homo sapiens
#Description = Wilms Tumor Protein (WT1) zinc fingers in complex with hydroxymethylated DNA
54.0	13.0	16.0	13.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
16.0	54.0	13.0	13.0

#ID = F3D15023
#Short = 4r2r_A
#Long = Wilms tumor protein, isoform 4/CRA_a
#W = 9
#Organisms = Homo sapiens
#Description = Wilms Tumor Protein (WT1) zinc fingers in complex with carboxylated DNA
67.0	11.0	9.0	9.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
9.0	67.0	9.0	11.0
0.0	0.0	96.0	0.0
9.0	67.0	11.0	9.0

#ID = F3D15024
#Short = 4r4e_B
#Long = HTH-type transcriptional regulator GlnR
#W = 7
#Organisms = Bacillus subtilis,strain 168
#Description = Structure of GlnR-DNA complex
13.0	16.0	13.0	54.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
13.0	13.0	13.0	57.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D15025
#Short = 4rb1_AB
#Long = DNA-binding transcriptional dual regulator of side
#W = 19
#Organisms = Magnetospirillum gryphiswaldense,Magnetospirillum gryphiswaldense MSR-1 v2
#Description = Crystal structure of Magnetospirillum gryphiswaldense MSR-1 Fur-Mn2+-E. coli Fur box
9.0	67.0	11.0	9.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
9.0	11.0	9.0	67.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	9.0	11.0	67.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0

#ID = F3D15026
#Short = 4rb1_B
#Long = DNA-binding transcriptional dual regulator of side
#W = 4
#Organisms = Magnetospirillum gryphiswaldense,Magnetospirillum gryphiswaldense MSR-1 v2
#Description = Crystal structure of Magnetospirillum gryphiswaldense MSR-1 Fur-Mn2+-E. coli Fur box
13.0	54.0	13.0	16.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
13.0	13.0	16.0	54.0

#ID = F3D15027
#Short = 4rb2_CD
#Long = DNA-binding transcriptional dual regulator of side
#W = 18
#Organisms = Magnetospirillum gryphiswaldense,Magnetospirillum gryphiswaldense MSR-1 v2
#Description = Crystal structure of Magnetospirillum gryphiswaldense MSR-1 SeMet-Fur-Mn2+-feoAB1 operator
4.0	7.0	4.0	81.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	4.0	7.0	81.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
81.0	7.0	4.0	4.0
76.0	9.0	4.0	7.0
81.0	7.0	4.0	4.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	4.0	7.0	81.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D15028
#Short = 4rb2_D
#Long = DNA-binding transcriptional dual regulator of side
#W = 10
#Organisms = Magnetospirillum gryphiswaldense,Magnetospirillum gryphiswaldense MSR-1 v2
#Description = Crystal structure of Magnetospirillum gryphiswaldense MSR-1 SeMet-Fur-Mn2+-feoAB1 operator
4.0	4.0	4.0	84.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	4.0	4.0	82.0
4.0	4.0	84.0	4.0
4.0	82.0	4.0	6.0
82.0	4.0	6.0	4.0
82.0	6.0	4.0	4.0
82.0	4.0	6.0	4.0

#ID = F3D15029
#Short = 4rb3_CD
#Long = DNA-binding transcriptional dual regulator of side
#W = 19
#Organisms = Magnetospirillum gryphiswaldense,Magnetospirillum gryphiswaldense MSR-1 v2
#Description = Crystal structure of Magnetospirillum gryphiswaldense MSR-1 Fur-Mn2+-feoAB1 operator
4.0	6.0	4.0	82.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
4.0	82.0	4.0	6.0
96.0	0.0	0.0	0.0
82.0	4.0	6.0	4.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
4.0	4.0	4.0	84.0
0.0	0.0	0.0	96.0
4.0	6.0	82.0	4.0
4.0	82.0	4.0	6.0
82.0	6.0	4.0	4.0

#ID = F3D15030
#Short = 4rb3_D
#Long = DNA-binding transcriptional dual regulator of side
#W = 10
#Organisms = Magnetospirillum gryphiswaldense,Magnetospirillum gryphiswaldense MSR-1 v2
#Description = Crystal structure of Magnetospirillum gryphiswaldense MSR-1 Fur-Mn2+-feoAB1 operator
11.0	9.0	9.0	67.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
9.0	67.0	11.0	9.0
96.0	0.0	0.0	0.0
67.0	9.0	11.0	9.0
96.0	0.0	0.0	0.0

#ID = F3D15031
#Short = 4rdu_A
#Long = Homeobox protein DLX-5
#W = 7
#Organisms = Homo sapiens
#Description = Crystal structure of a distal-less homeobox protein 5 (Dlx5) from Homo sapiens at 1.85 A resolution
8.0	69.0	11.0	8.0
0.0	8.0	0.0	88.0
72.0	8.0	8.0	8.0
96.0	0.0	0.0	0.0
8.0	8.0	11.0	69.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0

#ID = F3D15032
#Short = 4roc_A
#W = 16
9.0	69.0	9.0	9.0
69.0	9.0	9.0	9.0
9.0	69.0	9.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D15033
#Short = 4roc_AB
#Long = TATA-box-binding protein
#W = 15
#Organisms = Homo sapiens
#Description = Human TFIIB-related factor 2 (Brf2) and TBP bound to U6#2 promoter
70.0	11.0	5.0	10.0
11.0	60.0	5.0	20.0
24.0	24.0	24.0	24.0
10.0	6.0	5.0	75.0
96.0	0.0	0.0	0.0
5.0	5.0	11.0	75.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	90.0	0.0	5.0
0.0	90.0	0.0	6.0

#ID = F3D15034
#Short = 4rod_A
#W = 16
9.0	67.0	9.0	11.0
67.0	9.0	11.0	9.0
11.0	9.0	67.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0

#ID = F3D15035
#Short = 4rod_AB
#Long = TATA-box-binding protein
#W = 15
#Organisms = Homo sapiens
#Description = Human TFIIB-related factor 2 (Brf2) and TBP bound to TRNAU1 promoter
75.0	8.0	4.0	9.0
12.0	4.0	75.0	5.0
24.0	24.0	24.0	24.0
4.0	5.0	4.0	83.0
96.0	0.0	0.0	0.0
5.0	4.0	4.0	83.0
96.0	0.0	0.0	0.0
5.0	0.0	0.0	91.0
92.0	0.0	0.0	4.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	4.0	4.0	83.0
4.0	83.0	5.0	4.0

#ID = F3D15036
#Short = 4roe_A
#W = 16
8.0	11.0	69.0	8.0
96.0	0.0	0.0	0.0
61.0	8.0	10.0	17.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
8.0	11.0	8.0	69.0

#ID = F3D15037
#Short = 4roe_AB
#Long = TATA-box-binding protein
#W = 15
#Organisms = Homo sapiens
#Description = Human TFIIB-related factor 2 (Brf2) and TBP bound to RPPH1 promoter
6.0	6.0	78.0	6.0
84.0	0.0	12.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	72.0	12.0	6.0
0.0	0.0	0.0	96.0
6.0	6.0	0.0	84.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	24.0	12.0	54.0

#ID = F3D15038
#Short = 4s04_B
#Long = DNA-binding transcriptional regulator BasR
#W = 8
#Organisms = Klebsiella pneumoniae
#Description = Crystal structure of Klebsiella pneumoniae PmrA in complex with PmrA box DNA
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
73.0	7.0	7.0	9.0
0.0	0.0	96.0	0.0
7.0	73.0	9.0	7.0
73.0	9.0	7.0	7.0
73.0	7.0	9.0	7.0
0.0	0.0	96.0	0.0

#ID = F3D15039
#Short = 4s04_EF
#Long = DNA-binding transcriptional regulator BasR
#W = 18
#Organisms = Klebsiella pneumoniae
#Description = Crystal structure of Klebsiella pneumoniae PmrA in complex with PmrA box DNA
0.0	1.0	1.0	94.0
4.0	1.0	3.0	88.0
24.0	24.0	24.0	24.0
3.0	88.0	1.0	4.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
88.0	3.0	4.0	1.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	11.0	5.0	67.0
80.0	3.0	12.0	1.0
74.0	7.0	7.0	8.0
24.0	24.0	24.0	24.0
75.0	9.0	5.0	7.0
0.0	0.0	0.0	96.0
63.0	1.0	0.0	32.0
96.0	0.0	0.0	0.0

#ID = F3D15040
#Short = 4s05_A
#Long = DNA-binding transcriptional regulator BasR
#W = 5
#Organisms = Klebsiella pneumoniae
#Description = Crystal structure of Klebsiella pneumoniae PmrA in complex with PmrA box DNA
61.0	10.0	17.0	8.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
61.0	10.0	8.0	17.0
69.0	11.0	8.0	8.0

#ID = F3D15041
#Short = 4s05_AB
#Long = DNA-binding transcriptional regulator BasR
#W = 16
#Organisms = Klebsiella pneumoniae
#Description = Crystal structure of Klebsiella pneumoniae PmrA in complex with PmrA box DNA
4.0	90.0	1.0	1.0
15.0	17.0	11.0	53.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
11.0	6.0	76.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
78.0	17.0	1.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
65.0	11.0	9.0	11.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
69.0	7.0	17.0	3.0
93.0	1.0	1.0	1.0

#ID = F3D15042
#Short = 4s0h_AB
#Long = T-box transcription factor TBX5
#W = 13
#Organisms = Homo sapiens
#Description = TBX5 DB, NKX2.5 HD, ANF DNA Complex
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	90.0	6.0	0.0
0.0	0.0	0.0	96.0
12.0	12.0	6.0	66.0
12.0	78.0	6.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	18.0	60.0	18.0
12.0	12.0	6.0	66.0
0.0	0.0	96.0	0.0

#ID = F3D15043
#Short = 4s0h_EF
#Long = T-box transcription factor TBX5
#W = 13
#Organisms = Homo sapiens
#Description = TBX5 DB, NKX2.5 HD, ANF DNA Complex
0.0	96.0	0.0	0.0
54.0	13.0	13.0	16.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	13.0	57.0	13.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0

#ID = F3D15044
#Short = 4s2q_D
#Long = Transcription factor SOX-9
#W = 7
#Organisms = Mus musculus
#Description = Crystal Structure of HMG domain of the chondrogenesis master regulator, Sox9 in complex with ChIP-Seq identified DNA element
7.0	64.0	15.0	10.0
3.0	13.0	4.0	76.0
11.0	10.0	12.0	63.0
3.0	19.0	3.0	71.0
7.0	9.0	72.0	8.0
1.0	1.0	2.0	92.0
33.0	9.0	10.0	44.0

#ID = F3D15045
#Short = 4tnt_B
#Long = Mineralocorticoid receptor
#W = 6
#Organisms = Homo sapiens
#Description = Structure of the human mineralocorticoid receptor in complex with DNA
61.0	8.0	8.0	19.0
11.0	8.0	69.0	8.0
24.0	24.0	24.0	24.0
69.0	11.0	8.0	8.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15046
#Short = 4u0y_ABCD
#Long = HTH-type transcriptional repressor YvoA
#W = 14
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of the DNA-binding domains of YvoA in complex with palindromic operator DNA
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
6.0	35.0	6.0	49.0
21.0	43.0	11.0	21.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
9.0	12.0	58.0	17.0
75.0	3.0	12.0	6.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
3.0	92.0	0.0	1.0

#ID = F3D15047
#Short = 4u0y_B
#Long = HTH-type transcriptional repressor YvoA
#W = 7
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of the DNA-binding domains of YvoA in complex with palindromic operator DNA
5.0	5.0	6.0	80.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
5.0	16.0	5.0	70.0
10.0	60.0	5.0	21.0
5.0	5.0	5.0	81.0
80.0	5.0	6.0	5.0

#ID = F3D15048
#Short = 4umm_AE
#Long = ECR-USP
#W = 11
#Organisms = Heliothis virescens,Tobacco budworm moth
#Description = The Cryo-EM structure of the palindromic DNA-bound USP-EcR nuclear receptor reveals an asymmetric organization with allosteric domain positioning
0.0	0.0	96.0	0.0
0.0	1.0	19.0	76.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
51.0	14.0	12.0	19.0
24.0	24.0	24.0	24.0
6.0	8.0	6.0	76.0
0.0	0.0	96.0	0.0
53.0	12.0	12.0	19.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D15049
#Short = 4uno_A
#Long = ETS TRANSLOCATION VARIANT 5
#W = 4
#Organisms = Homo sapiens
#Description = Crystal structure of the ETS domain of human ETV5 in complex with DNA
19.0	19.0	19.0	39.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
19.0	1.0	76.0	0.0

#ID = F3D15050
#Short = 4uus_AB
#Long = HOMEOTIC PROTEIN ULTRABITHORAX
#W = 10
#Organisms = Drosophila melanogaster
#Description = CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING THE UBDA MOTIF
4.0	4.0	16.0	72.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	4.0	1.0	91.0
70.0	4.0	4.0	18.0
5.0	4.0	4.0	83.0
96.0	0.0	0.0	0.0
4.0	16.0	6.0	70.0
24.0	24.0	24.0	24.0
16.0	4.0	72.0	4.0

#ID = F3D15051
#Short = 4uuv_DP
#Long = ETS TRANSLOCATION VARIANT 4
#W = 17
#Organisms = Homo sapiens
#Description = Structure of the DNA binding ETS domain of human ETV4 in complex with DNA
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
13.0	16.0	13.0	54.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
48.0	13.0	22.0	13.0
0.0	0.0	96.0	0.0
13.0	16.0	13.0	54.0

#ID = F3D15052
#Short = 4uuv_GJ
#Long = ETS TRANSLOCATION VARIANT 4
#W = 17
#Organisms = Homo sapiens
#Description = Structure of the DNA binding ETS domain of human ETV4 in complex with DNA
11.0	25.0	5.0	55.0
24.0	24.0	24.0	24.0
10.0	0.0	5.0	81.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
71.0	10.0	5.0	10.0
24.0	24.0	24.0	24.0
5.0	5.0	81.0	5.0
80.0	6.0	5.0	5.0

#ID = F3D15053
#Short = 4uuv_M
#Long = ETS TRANSLOCATION VARIANT 4
#W = 10
#Organisms = Homo sapiens
#Description = Structure of the DNA binding ETS domain of human ETV4 in complex with DNA
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
69.0	17.0	0.0	10.0
24.0	24.0	24.0	24.0
52.0	8.0	28.0	8.0
61.0	17.0	10.0	8.0

#ID = F3D15054
#Short = 4uuv_SV
#Long = ETS TRANSLOCATION VARIANT 4
#W = 16
#Organisms = Homo sapiens
#Description = Structure of the DNA binding ETS domain of human ETV4 in complex with DNA
13.0	57.0	13.0	13.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
54.0	13.0	13.0	16.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D15055
#Short = 4wk8_FG
#Long = Forkhead box protein P3
#W = 5
#Organisms = Homo sapiens
#Description = FOXP3 forms a domain-swapped dimer to bridge DNA
69.0	9.0	9.0	9.0
11.0	9.0	9.0	67.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
9.0	9.0	69.0	9.0

#ID = F3D15056
#Short = 4wls_AB
#Long = HTH-type transcriptional regulator CueR
#W = 19
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of the metal-free (repressor) form of E. Coli CUER, a copper efflux regulator, bound to COPA promoter DNA
5.0	3.0	85.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
3.0	85.0	5.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	3.0	93.0
3.0	20.0	3.0	70.0
17.0	17.0	11.0	51.0
1.0	0.0	92.0	3.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	20.0	72.0	1.0

#ID = F3D15057
#Short = 4wlw_A
#Long = HTH-type transcriptional regulator CueR
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF THE AG(I) (ACTIVATOR) FORM OF E. COLI CUER, A COPPER EFFLUX REGULATOR, BOUND TO COPA PROMOTER DNA
0.0	96.0	0.0	0.0
9.0	6.0	6.0	75.0
0.0	0.0	96.0	0.0
6.0	9.0	75.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	6.0	68.0	9.0
6.0	6.0	78.0	6.0

#ID = F3D15058
#Short = 4wu4_AB
#Long = Response regulator receiver domain protein
#W = 14
#Organisms = Enterococcus faecalis S613
#Description = Crystal structure of E. faecalis DNA binding domain LiaRD191N complexed with 22bp DNA
0.0	0.0	0.0	96.0
1.0	86.0	0.0	9.0
0.0	0.0	96.0	0.0
0.0	24.0	0.0	72.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
64.0	4.0	14.0	14.0
0.0	14.0	78.0	4.0
24.0	24.0	24.0	24.0
19.0	54.0	9.0	14.0
0.0	96.0	0.0	0.0

#ID = F3D15059
#Short = 4wu4_B
#Long = Response regulator receiver domain protein
#W = 6
#Organisms = Enterococcus faecalis S613
#Description = Crystal structure of E. faecalis DNA binding domain LiaRD191N complexed with 22bp DNA
12.0	12.0	12.0	60.0
5.0	55.0	6.0	30.0
3.0	3.0	86.0	4.0
11.0	32.0	12.0	41.0
21.0	29.0	20.0	26.0
7.0	76.0	6.0	7.0

#ID = F3D15060
#Short = 4wuh_B
#Long = Response regulator receiver domain protein
#W = 7
#Organisms = Enterococcus faecalis,Enterococcus faecalis S613
#Description = Crystal structure of E. faecalis DNA binding domain LiaR wild type complexed with 22bp DNA
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
13.0	16.0	13.0	54.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
13.0	13.0	13.0	57.0

#ID = F3D15061
#Short = 4wul_A
#Long = Response regulator receiver domain protein
#W = 7
#Organisms = Enterococcus faecalis S613
#Description = Crystal structure of E. faecalis DNA binding domain LiaRD191N complexed with 26bp DNA
7.0	75.0	7.0	7.0
7.0	7.0	9.0	73.0
24.0	24.0	24.0	24.0
73.0	9.0	7.0	7.0
7.0	7.0	7.0	75.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15062
#Short = 4wul_AB
#Long = Response regulator receiver domain protein
#W = 16
#Organisms = Enterococcus faecalis S613
#Description = Crystal structure of E. faecalis DNA binding domain LiaRD191N complexed with 26bp DNA
0.0	0.0	0.0	96.0
94.0	1.0	1.0	0.0
0.0	92.0	3.0	1.0
0.0	1.0	0.0	95.0
24.0	24.0	24.0	24.0
74.0	18.0	1.0	3.0
48.0	11.0	16.0	21.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	1.0	0.0	94.0
24.0	24.0	24.0	24.0
64.0	4.0	13.0	15.0
15.0	0.0	21.0	60.0
1.0	0.0	95.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15063
#Short = 4wwc_AB
#Long = HTH-type transcriptional repressor YvoA
#W = 15
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of full length YvoA in complex with palindromic operator DNA
0.0	96.0	0.0	0.0
73.0	2.0	17.0	4.0
53.0	8.0	29.0	6.0
8.0	11.0	8.0	69.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	2.0	3.0	91.0
24.0	24.0	24.0	24.0
0.0	8.0	2.0	86.0
96.0	0.0	0.0	0.0
8.0	22.0	49.0	17.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
86.0	2.0	4.0	4.0

#ID = F3D15064
#Short = 4wwc_B
#Long = HTH-type transcriptional repressor YvoA
#W = 15
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of full length YvoA in complex with palindromic operator DNA
0.0	96.0	0.0	0.0
51.0	6.0	25.0	14.0
44.0	6.0	34.0	12.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
58.0	0.0	19.0	19.0

#ID = F3D15065
#Short = 4wzs_D
#Long = ECU04_1440 protein
#W = 9
#Organisms = Encephalitozoon cuniculi (strain GB-M1),Microsporidian parasite
#Description = Crystal structure of the Mot1 N-terminal domain in complex with TBP and NC2 bound to a promoter DNA fragment
7.0	73.0	7.0	9.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
9.0	7.0	7.0	73.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
73.0	7.0	9.0	7.0
96.0	0.0	0.0	0.0
7.0	9.0	73.0	7.0

#ID = F3D15066
#Short = 4x4b_ABCD
#Long = Regulatory protein
#W = 33
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 2.1 MGy
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	2.0	0.0	94.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
94.0	1.0	0.0	1.0
1.0	55.0	19.0	21.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	0.0	3.0	92.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
90.0	1.0	4.0	1.0
1.0	84.0	11.0	0.0
19.0	0.0	77.0	0.0
1.0	92.0	3.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
67.0	9.0	9.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
92.0	0.0	1.0	3.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
5.0	72.0	9.0	10.0
92.0	3.0	0.0	1.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15067
#Short = 4x4c_ABCD
#Long = Regulatory protein
#W = 33
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 6.2 MGy
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
1.0	1.0	0.0	94.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
94.0	0.0	1.0	1.0
1.0	55.0	19.0	21.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	0.0	3.0	92.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
90.0	4.0	1.0	1.0
1.0	84.0	11.0	0.0
19.0	0.0	76.0	1.0
1.0	92.0	1.0	2.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
67.0	9.0	11.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
90.0	2.0	1.0	3.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
8.0	72.0	9.0	7.0
94.0	1.0	0.0	1.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15068
#Short = 4x4d_ABCD
#Long = Regulatory protein
#W = 33
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 10.3 MGy
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
1.0	1.0	0.0	94.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
95.0	0.0	0.0	1.0
3.0	55.0	17.0	21.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	0.0	3.0	92.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
90.0	4.0	1.0	1.0
1.0	84.0	11.0	0.0
19.0	0.0	76.0	1.0
3.0	92.0	1.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
67.0	9.0	9.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
90.0	2.0	1.0	3.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
5.0	72.0	12.0	7.0
92.0	3.0	0.0	1.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15069
#Short = 4x4e_ABCD
#Long = Regulatory protein
#W = 33
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 14.4 MGy
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	2.0	0.0	94.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
95.0	0.0	0.0	1.0
1.0	55.0	17.0	23.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	0.0	1.0	94.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
90.0	1.0	4.0	1.0
0.0	84.0	11.0	1.0
19.0	1.0	76.0	0.0
3.0	92.0	1.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
67.0	11.0	9.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
90.0	0.0	1.0	5.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
5.0	72.0	9.0	10.0
94.0	1.0	0.0	1.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15070
#Short = 4x4e_C
#Long = Regulatory protein
#W = 4
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 14.4 MGy
0.0	96.0	0.0	0.0
54.0	16.0	13.0	13.0
0.0	96.0	0.0	0.0
54.0	13.0	16.0	13.0

#ID = F3D15071
#Short = 4x4f_ABCD
#Long = Regulatory protein
#W = 33
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 20.6 MGy
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
1.0	1.0	0.0	94.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
95.0	0.0	0.0	1.0
1.0	55.0	17.0	23.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	0.0	1.0	94.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
90.0	1.0	1.0	4.0
0.0	84.0	11.0	1.0
19.0	0.0	76.0	1.0
1.0	94.0	1.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
69.0	9.0	9.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
92.0	0.0	1.0	3.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
5.0	75.0	9.0	7.0
94.0	1.0	0.0	1.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15072
#Short = 4x4g_ABCD
#Long = Regulatory protein
#W = 33
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 26.8 MGy
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
1.0	1.0	0.0	94.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
94.0	1.0	0.0	1.0
1.0	55.0	19.0	21.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	2.0	1.0	92.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
90.0	1.0	1.0	4.0
1.0	84.0	11.0	0.0
20.0	0.0	76.0	0.0
3.0	92.0	1.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
67.0	9.0	9.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
90.0	2.0	1.0	3.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
8.0	72.0	9.0	7.0
92.0	1.0	0.0	3.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15073
#Short = 4x4h_ABCD
#Long = Regulatory protein
#W = 33
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 35.7 MGy
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	2.0	0.0	94.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
94.0	0.0	0.0	2.0
1.0	57.0	17.0	21.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	2.0	1.0	92.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
90.0	1.0	1.0	4.0
0.0	84.0	11.0	1.0
19.0	0.0	76.0	1.0
1.0	92.0	3.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
69.0	9.0	9.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
90.0	2.0	1.0	3.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
5.0	72.0	12.0	7.0
92.0	1.0	2.0	1.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15074
#Short = 4x4i_ABCD
#Long = Regulatory protein
#W = 33
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 44.6 MGy
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	1.0	0.0	95.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
95.0	0.0	0.0	1.0
1.0	55.0	17.0	23.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
1.0	2.0	1.0	92.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
93.0	1.0	1.0	1.0
1.0	84.0	11.0	0.0
19.0	1.0	76.0	0.0
1.0	94.0	1.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
69.0	9.0	9.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
90.0	0.0	3.0	3.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
5.0	75.0	9.0	7.0
92.0	1.0	2.0	1.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15075
#Short = 4x4i_C
#Long = Regulatory protein
#W = 4
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 44.6 MGy
0.0	96.0	0.0	0.0
54.0	13.0	16.0	13.0
0.0	96.0	0.0	0.0
54.0	13.0	16.0	13.0

#ID = F3D15076
#Short = 4x9j_A
#Long = Early growth response protein 1
#W = 10
#Organisms = Homo sapiens
#Description = EGR-1 with Doubly Methylated DNA
38.0	19.0	19.0	20.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	76.0	0.0	20.0

#ID = F3D15077
#Short = 4xic_A
#Long = Homeotic protein antennapedia
#W = 6
#Organisms = Drosophila melanogaster
#Description = ANTPHD WITH 15BP di-thioate modified DNA DUPLEX
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
13.0	13.0	16.0	54.0
13.0	16.0	54.0	13.0

#ID = F3D15078
#Short = 4xrm_AB
#Long = Homeobox protein Meis2
#W = 12
#Organisms = Homo sapiens
#Description = homodimer of TALE type homeobox transcription factor MEIS1 complexes with specific DNA
5.0	6.0	5.0	80.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
80.0	5.0	6.0	5.0
80.0	5.0	6.0	5.0
5.0	5.0	5.0	81.0
5.0	5.0	5.0	81.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
80.0	5.0	6.0	5.0

#ID = F3D15079
#Short = 4xrm_B
#Long = Homeobox protein Meis2
#W = 6
#Organisms = Homo sapiens
#Description = homodimer of TALE type homeobox transcription factor MEIS1 complexes with specific DNA
9.0	9.0	9.0	69.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
67.0	11.0	9.0	9.0
67.0	11.0	9.0	9.0

#ID = F3D15080
#Short = 4y5w_AC
#Long = Signal transducer and activator of transcription 6
#W = 14
#Organisms = Homo sapiens
#Description = Transcription factor-DNA complex
0.0	96.0	0.0	0.0
8.0	69.0	11.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
1.0	0.0	87.0	8.0
96.0	0.0	0.0	0.0
69.0	8.0	8.0	11.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
72.0	8.0	8.0	8.0

#ID = F3D15081
#Short = 4y5w_BD
#Long = Signal transducer and activator of transcription 6
#W = 7
#Organisms = Homo sapiens
#Description = Transcription factor-DNA complex
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	16.0	54.0	13.0
13.0	16.0	54.0	13.0

#ID = F3D15082
#Short = 4y60_C
#Long = Transcription factor SOX-18
#W = 6
#Organisms = Mus musculus
#Description = Structure of SOX18-HMG/PROX1-DNA
12.0	60.0	12.0	12.0
60.0	12.0	12.0	12.0
0.0	0.0	0.0	96.0
0.0	12.0	0.0	84.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D15083
#Short = 4yg1_ABCD
#Long = Antitoxin HipB
#W = 44
#Organisms = Escherichia coli (strain K12)
#Description = HipB-O1-O2 complex/P21212 crystal form
1.0	4.0	1.0	90.0
96.0	0.0	0.0	0.0
5.0	7.0	8.0	76.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
6.0	3.0	82.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	8.0	80.0	3.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	18.0	0.0	78.0
71.0	5.0	13.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	1.0	3.0	86.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
75.0	13.0	5.0	3.0
3.0	19.0	9.0	65.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D15084
#Short = 4yg1_B
#Long = Antitoxin HipB
#W = 4
#Organisms = Escherichia coli (strain K12)
#Description = HipB-O1-O2 complex/P21212 crystal form
0.0	0.0	96.0	0.0
67.0	9.0	11.0	9.0
9.0	9.0	9.0	69.0
67.0	9.0	9.0	11.0

#ID = F3D15085
#Short = 4yg4_ABCD
#Long = Antitoxin HipB
#W = 15
#Organisms = Escherichia coli (strain K12)
#Description = HipB-O1-O1* complex
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
68.0	14.0	7.0	7.0
14.0	59.0	9.0	14.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
14.0	14.0	54.0	14.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15086
#Short = 4yg4_B
#Long = Antitoxin HipB
#W = 4
#Organisms = Escherichia coli (strain K12)
#Description = HipB-O1-O1* complex
7.0	7.0	75.0	7.0
9.0	7.0	73.0	7.0
7.0	7.0	75.0	7.0
73.0	7.0	9.0	7.0

#ID = F3D15087
#Short = 4yg7_BCDEGK
#Long = Antitoxin HipB
#W = 41
#Organisms = Escherichia coli (strain K12)
#Description = Structure of FL autorepression promoter complex
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
3.0	89.0	2.0	2.0
3.0	89.0	2.0	2.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
10.0	8.0	64.0	14.0
2.0	3.0	89.0	2.0
90.0	2.0	2.0	2.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
2.0	2.0	2.0	90.0
90.0	2.0	2.0	2.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
12.0	66.0	8.0	10.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
2.0	2.0	90.0	2.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
2.0	3.0	2.0	89.0

#ID = F3D15088
#Short = 4yj0_ABC
#Long = Doublesex- and mab-3-related transcription factor
#W = 11
#Organisms = Homo sapiens
#Description = Crystal structure of the DM domain of human DMRT1 bound to 25mer target DNA
80.0	5.0	5.0	6.0
5.0	6.0	5.0	80.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
80.0	5.0	6.0	5.0
24.0	24.0	24.0	24.0
5.0	6.0	5.0	80.0
0.0	0.0	96.0	0.0
5.0	0.0	6.0	85.0
0.0	5.0	1.0	90.0
5.0	5.0	81.0	5.0

#ID = F3D15089
#Short = 4yj0_C
#Long = Doublesex- and mab-3-related transcription factor
#W = 5
#Organisms = Homo sapiens
#Description = Crystal structure of the DM domain of human DMRT1 bound to 25mer target DNA
8.0	8.0	11.0	69.0
0.0	0.0	96.0	0.0
8.0	0.0	10.0	78.0
0.0	17.0	1.0	78.0
8.0	10.0	61.0	17.0

#ID = F3D15090
#Short = 4yln_L
#Long = RNA polymerase sigma factor RpoD
#W = 33
#Organisms = Escherichia coli (strain K12)
#Description = E. coli Transcription Initiation Complex - 17-bp spacer and 4-nt RNA
4.0	84.0	4.0	4.0
4.0	6.0	4.0	82.0
4.0	6.0	4.0	82.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
6.0	82.0	4.0	4.0
84.0	4.0	4.0	4.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
6.0	4.0	4.0	82.0
6.0	4.0	82.0	4.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0

#ID = F3D15091
#Short = 4ylo_F
#Long = RNA polymerase sigma factor RpoD
#W = 32
#Organisms = Escherichia coli (strain K12)
#Description = E. coli Transcription Initiation Complex - 16-bp spacer and 4-nt RNA
3.0	84.0	3.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
3.0	87.0	3.0	3.0
77.0	9.0	3.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	3.0	2.0	88.0
24.0	24.0	24.0	24.0
9.0	7.0	7.0	73.0
3.0	6.0	84.0	3.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
84.0	3.0	6.0	3.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
3.0	6.0	3.0	84.0
0.0	0.0	96.0	0.0

#ID = F3D15092
#Short = 4ylp_F
#Long = RNA polymerase sigma factor RpoD
#W = 32
#Organisms = Escherichia coli (strain K12)
#Description = E. coli Transcription Initiation Complex - 16-bp spacer and 5-nt RNA
6.0	5.0	5.0	80.0
0.0	0.0	96.0	0.0
80.0	6.0	5.0	5.0
24.0	24.0	24.0	24.0
80.0	5.0	6.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
80.0	5.0	5.0	6.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
6.0	5.0	5.0	80.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
6.0	5.0	80.0	5.0

#ID = F3D15093
#Short = 4zkg_AB
#Long = Mothers against decapentaplegic homolog 5
#W = 10
#Organisms = Mus musculus
#Description = Crystal Structure of SMAD5-MH1/palindromic SBE DNA complex
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
13.0	13.0	13.0	57.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
16.0	13.0	13.0	54.0

#ID = F3D15094
#Short = 4zl2_A
#Long = Mothers against decapentaplegic homolog 5
#W = 5
#Organisms = Mus musculus
#Description = Crystal Structure of SMAD5-MH1/GC-BRE DNA complex
13.0	57.0	13.0	13.0
24.0	24.0	24.0	24.0
13.0	54.0	13.0	16.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15095
#Short = 4zl3_AB
#Long = Mothers against decapentaplegic homolog 5
#W = 12
#Organisms = Mus musculus
#Description = Crystal Structure of SMAD5-MH1 in complex with a composite DNA sequence
6.0	12.0	6.0	72.0
0.0	0.0	96.0	0.0
6.0	60.0	6.0	24.0
0.0	96.0	0.0	0.0
6.0	6.0	78.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
78.0	0.0	6.0	12.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	0.0	84.0	12.0

#ID = F3D15096
#Short = 4zl3_F
#Long = Mothers against decapentaplegic homolog 5
#W = 5
#Organisms = Mus musculus
#Description = Crystal Structure of SMAD5-MH1 in complex with a composite DNA sequence
67.0	9.0	11.0	9.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
11.0	67.0	9.0	9.0
9.0	9.0	11.0	67.0

#ID = F3D15097
#Short = 4zpk_A
#Long = Aryl hydrocarbon receptor nuclear translocator
#W = 6
#Organisms = Mus musculus
#Description = Crystal Structure of the Heterodimeric HIF-2a:ARNT Complex with HRE DNA
7.0	73.0	9.0	7.0
7.0	7.0	75.0	7.0
7.0	73.0	9.0	7.0
96.0	0.0	0.0	0.0
7.0	75.0	7.0	7.0
0.0	0.0	96.0	0.0

#ID = F3D15098
#Short = 4zpk_AB
#Long = Aryl hydrocarbon receptor nuclear translocator
#W = 7
#Organisms = Mus musculus
#Description = Crystal Structure of the Heterodimeric HIF-2a:ARNT Complex with HRE DNA
9.0	73.0	7.0	7.0
9.0	7.0	73.0	7.0
7.0	73.0	7.0	9.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
9.0	7.0	7.0	73.0

#ID = F3D15099
#Short = 4zpr_AB
#Long = Aryl hydrocarbon receptor nuclear translocator
#W = 6
#Organisms = Mus musculus
#Description = Crystal Structure of the Heterodimeric HIF-1a:ARNT Complex with HRE DNA
16.0	13.0	54.0	13.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
13.0	13.0	13.0	57.0

#ID = F3D15100
#Short = 5bmz_AB
#Long = HcaR protein
#W = 19
#Organisms = Acinetobacter baylyi,Acinetobacter sp. ADP1,strain ATCC 33305 / BD413 / ADP1
#Description = Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from Acinetobacter sp. ADP complexed with 24mer DNA.
86.0	0.0	6.0	4.0
4.0	4.0	7.0	81.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
9.0	9.0	67.0	11.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	72.0	9.0	6.0
0.0	0.0	0.0	96.0
4.0	4.0	81.0	7.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
81.0	4.0	4.0	7.0
0.0	0.0	0.0	96.0

#ID = F3D15101
#Short = 5bmz_CD
#Long = HcaR protein
#W = 16
#Organisms = Acinetobacter baylyi,Acinetobacter sp. ADP1,strain ATCC 33305 / BD413 / ADP1
#Description = Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from Acinetobacter sp. ADP complexed with 24mer DNA.
0.0	0.0	0.0	96.0
2.0	87.0	2.0	5.0
96.0	0.0	0.0	0.0
5.0	2.0	87.0	2.0
2.0	78.0	2.0	14.0
84.0	2.0	2.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
11.0	71.0	14.0	0.0
0.0	0.0	0.0	96.0
2.0	2.0	75.0	17.0
87.0	5.0	2.0	2.0
24.0	24.0	24.0	24.0
93.0	1.0	2.0	0.0
5.0	2.0	2.0	87.0

#ID = F3D15102
#Short = 5bmz_D
#Long = HcaR protein
#W = 9
#Organisms = Acinetobacter baylyi,Acinetobacter sp. ADP1,strain ATCC 33305 / BD413 / ADP1
#Description = Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from Acinetobacter sp. ADP complexed with 24mer DNA.
73.0	7.0	9.0	7.0
7.0	7.0	7.0	75.0
73.0	9.0	7.0	7.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
9.0	7.0	7.0	73.0

#ID = F3D15103
#Short = 5c8e_BC
#Long = Light-dependent transcriptional regulator CarH
#W = 15
#Organisms = strain HB27 / ATCC BAA-163 / DSM 7039,Thermus thermophilus
#Description = Crystal structure of Thermus thermophilus CarH bound to adenosylcobalamin and a 26-bp DNA segment
5.0	7.0	5.0	79.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
81.0	5.0	5.0	5.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
5.0	5.0	11.0	75.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
5.0	75.0	11.0	5.0
81.0	5.0	5.0	5.0

#ID = F3D15104
#Short = 5c8e_C
#Long = Light-dependent transcriptional regulator CarH
#W = 5
#Organisms = strain HB27 / ATCC BAA-163 / DSM 7039,Thermus thermophilus
#Description = Crystal structure of Thermus thermophilus CarH bound to adenosylcobalamin and a 26-bp DNA segment
17.0	8.0	8.0	63.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
8.0	61.0	17.0	10.0
69.0	8.0	11.0	8.0

#ID = F3D15105
#Short = 5cbx_AB
#Long = AncGR DNA Binding Domain
#W = 13
#Organisms = Homo sapiens,unidentified
#Description = AncGR DNA Binding Domain - (+)GRE Complex
9.0	9.0	67.0	11.0
24.0	24.0	24.0	24.0
67.0	11.0	9.0	9.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	67.0	11.0	9.0

#ID = F3D15106
#Short = 5cbx_E
#Long = AncGR DNA Binding Domain
#W = 5
#Organisms = Homo sapiens,unidentified
#Description = AncGR DNA Binding Domain - (+)GRE Complex
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
13.0	16.0	13.0	54.0
24.0	24.0	24.0	24.0
13.0	57.0	13.0	13.0

#ID = F3D15107
#Short = 5cbx_EF
#Long = AncGR DNA Binding Domain
#W = 13
#Organisms = Homo sapiens,unidentified
#Description = AncGR DNA Binding Domain - (+)GRE Complex
0.0	1.0	90.0	5.0
24.0	24.0	24.0	24.0
46.0	15.0	25.0	10.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
20.0	15.0	16.0	45.0
24.0	24.0	24.0	24.0
60.0	25.0	5.0	6.0

#ID = F3D15108
#Short = 5cby_AB
#Long = AncGR2 DNA Binding Domain
#W = 13
#Organisms = Homo sapiens,unidentified
#Description = AncGR2 DNA Binding Domain - (+)GRE Complex
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
54.0	13.0	13.0	16.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	13.0	13.0	57.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0

#ID = F3D15109
#Short = 5cby_B
#Long = AncGR2 DNA Binding Domain
#W = 5
#Organisms = Homo sapiens,unidentified
#Description = AncGR2 DNA Binding Domain - (+)GRE Complex
13.0	13.0	54.0	16.0
24.0	24.0	24.0	24.0
57.0	13.0	13.0	13.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15110
#Short = 5cbz_AB
#Long = AncMR DNA Binding Domain
#W = 13
#Organisms = Homo sapiens,unidentified
#Description = AncMR DNA Binding Domain - (+)GRE Complex
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
64.0	10.0	10.0	12.0
0.0	96.0	0.0	0.0
64.0	10.0	12.0	10.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	11.0	0.0	85.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	85.0	0.0	11.0

#ID = F3D15111
#Short = 5cbz_E
#Long = AncMR DNA Binding Domain
#W = 5
#Organisms = Homo sapiens,unidentified
#Description = AncMR DNA Binding Domain - (+)GRE Complex
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
13.0	13.0	16.0	54.0
24.0	24.0	24.0	24.0
16.0	54.0	13.0	13.0

#ID = F3D15112
#Short = 5cbz_EF
#Long = AncMR DNA Binding Domain
#W = 13
#Organisms = Homo sapiens,unidentified
#Description = AncMR DNA Binding Domain - (+)GRE Complex
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
53.0	12.0	10.0	21.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
10.0	23.0	10.0	53.0
24.0	24.0	24.0	24.0
10.0	86.0	0.0	0.0

#ID = F3D15113
#Short = 5cc0_AB
#Long = AncSR2 DNA Binding Domain
#W = 13
#Organisms = Homo sapiens,synthetic construct
#Description = AncSR2 - TSLP nGRE complex
19.0	19.0	19.0	39.0
21.0	33.0	21.0	21.0
22.0	22.0	25.0	27.0
24.0	24.0	24.0	24.0
14.0	52.0	16.0	14.0
22.0	27.0	25.0	22.0
22.0	25.0	27.0	22.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
21.0	21.0	31.0	23.0
8.0	72.0	8.0	8.0
14.0	13.0	56.0	13.0

#ID = F3D15114
#Short = 5cc1_AB
#Long = Glucocorticoid receptor
#W = 13
#Organisms = Homo sapiens
#Description = S425G Glucocorticoid receptor DNA binding domain - (+)GRE complex
8.0	0.0	80.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
72.0	8.0	8.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	8.0	8.0	72.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	72.0	8.0	8.0

#ID = F3D15115
#Short = 5cc1_WX
#Long = Glucocorticoid receptor
#W = 13
#Organisms = Homo sapiens
#Description = S425G Glucocorticoid receptor DNA binding domain - (+)GRE complex
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
12.0	12.0	12.0	60.0
0.0	0.0	96.0	0.0
12.0	12.0	12.0	60.0
24.0	24.0	24.0	24.0
12.0	84.0	0.0	0.0

#ID = F3D15116
#Short = 5d4r_A
#Long = Arabinose metabolism transcriptional repressor
#W = 6
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal Structure of AraR(DBD) in complex with operator ORE1
0.0	96.0	0.0	0.0
19.0	1.0	0.0	76.0
24.0	24.0	24.0	24.0
38.0	20.0	19.0	19.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15117
#Short = 5d4r_AB
#Long = Arabinose metabolism transcriptional repressor
#W = 11
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal Structure of AraR(DBD) in complex with operator ORE1
9.0	11.0	7.0	69.0
19.0	1.0	76.0	0.0
0.0	0.0	96.0	0.0
7.0	23.0	9.0	57.0
76.0	10.0	7.0	3.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
55.0	11.0	15.0	15.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15118
#Short = 5d4s_AB
#Long = Arabinose metabolism transcriptional repressor
#W = 10
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal Structure of AraR(DBD) in complex with operator ORX1
0.0	10.0	0.0	86.0
0.0	0.0	96.0	0.0
0.0	25.0	6.0	65.0
24.0	24.0	24.0	24.0
1.0	93.0	0.0	2.0
0.0	0.0	96.0	0.0
4.0	8.0	6.0	78.0
51.0	8.0	14.0	23.0
6.0	38.0	8.0	44.0
1.0	0.0	91.0	4.0

#ID = F3D15119
#Short = 5d4s_B
#Long = Arabinose metabolism transcriptional repressor
#W = 8
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal Structure of AraR(DBD) in complex with operator ORX1
9.0	9.0	9.0	69.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
11.0	9.0	9.0	67.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
9.0	11.0	9.0	67.0

#ID = F3D15120
#Short = 5d5u_B
#Long = Heat shock factor protein 1
#W = 4
#Organisms = Homo sapiens
#Description = Crystal structure of human Hsf1 with HSE DNA
0.0	0.0	96.0	0.0
13.0	16.0	13.0	54.0
0.0	0.0	0.0	96.0
16.0	54.0	13.0	13.0

#ID = F3D15121
#Short = 5d5v_B
#Long = Heat shock factor protein 1
#W = 7
#Organisms = Homo sapiens
#Description = Crystal structure of human Hsf1 with Satellite III repeat DNA
9.0	9.0	11.0	67.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
69.0	9.0	9.0	9.0
24.0	24.0	24.0	24.0
9.0	9.0	69.0	9.0

#ID = F3D15122
#Short = 5d5v_BD
#Long = Heat shock factor protein 1
#W = 8
#Organisms = Homo sapiens
#Description = Crystal structure of human Hsf1 with Satellite III repeat DNA
6.0	6.0	78.0	6.0
0.0	0.0	96.0	0.0
78.0	6.0	6.0	6.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
0.0	0.0	89.0	7.0
0.0	0.0	96.0	0.0
75.0	6.0	9.0	6.0

#ID = F3D15123
#Short = 5d5x_BE
#Long = Putative transcription factor
#W = 7
#Organisms = Chaetomium thermophilum,strain DSM 1495 / CBS 144.50 / IMI 039719
#Description = Crystal structure of Chaetomium thermophilum Skn7 with SSRE DNA
9.0	84.0	2.0	1.0
1.0	90.0	3.0	2.0
12.0	58.0	17.0	9.0
67.0	7.0	17.0	5.0
2.0	2.0	90.0	2.0
10.0	79.0	3.0	4.0
40.0	28.0	13.0	15.0

#ID = F3D15124
#Short = 5d5x_E
#Long = Putative transcription factor
#W = 6
#Organisms = Chaetomium thermophilum,strain DSM 1495 / CBS 144.50 / IMI 039719
#Description = Crystal structure of Chaetomium thermophilum Skn7 with SSRE DNA
9.0	67.0	9.0	11.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
11.0	67.0	9.0	9.0
67.0	11.0	9.0	9.0

#ID = F3D15125
#Short = 5d8k_B
#Long = Heat shock factor protein 2
#W = 4
#Organisms = Homo sapiens
#Description = Human HSF2 DNA-Binding Domain bound to 2-site HSE DNA at 1.73 Angstroms Resolution
13.0	16.0	54.0	13.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
13.0	54.0	13.0	16.0

#ID = F3D15126
#Short = 5d8l_DF
#Long = Heat shock factor protein 2
#W = 12
#Organisms = Homo sapiens
#Description = Human HSF2 DNA Binding Domain in complex with 3-site HSE DNA at 2.1 Angstroms Resolution
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
88.0	2.0	2.0	4.0
83.0	4.0	7.0	2.0
52.0	30.0	7.0	7.0
7.0	54.0	28.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
15.0	2.0	7.0	72.0
4.0	2.0	2.0	88.0
0.0	96.0	0.0	0.0
9.0	0.0	1.0	86.0

#ID = F3D15127
#Short = 5d8l_F
#Long = Heat shock factor protein 2
#W = 5
#Organisms = Homo sapiens
#Description = Human HSF2 DNA Binding Domain in complex with 3-site HSE DNA at 2.1 Angstroms Resolution
13.0	16.0	13.0	54.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
54.0	13.0	13.0	16.0

#ID = F3D15128
#Short = 5dtd_A
#Long = DNA-binding protein Fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27bp DNA F1-8C (AAATTCGTTTGAATTTTGAGCGAATTT)
0.0	84.0	0.0	12.0
0.0	0.0	96.0	0.0
12.0	60.0	12.0	12.0
24.0	24.0	24.0	24.0
12.0	60.0	12.0	12.0
96.0	0.0	0.0	0.0

#ID = F3D15129
#Short = 5dtd_AB
#Long = DNA-binding protein Fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27bp DNA F1-8C (AAATTCGTTTGAATTTTGAGCGAATTT)
3.0	86.0	3.0	4.0
0.0	0.0	96.0	0.0
13.0	56.0	18.0	9.0
24.0	24.0	24.0	24.0
1.0	6.0	89.0	0.0
90.0	3.0	3.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
13.0	72.0	8.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
76.0	13.0	4.0	3.0
0.0	96.0	0.0	0.0
3.0	4.0	86.0	3.0

#ID = F3D15130
#Short = 5e3l_AB
#Long = DNA-binding protein Fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27bp DNA F1-8G (AAATTGGTTTGAATTTTGAGCCAATTT)
6.0	3.0	84.0	3.0
0.0	0.0	96.0	0.0
7.0	72.0	10.0	7.0
24.0	24.0	24.0	24.0
3.0	87.0	3.0	3.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	84.0	3.0	3.0
80.0	3.0	10.0	3.0
24.0	24.0	24.0	24.0
84.0	6.0	3.0	3.0
0.0	96.0	0.0	0.0
6.0	84.0	3.0	3.0

#ID = F3D15131
#Short = 5e3l_B
#Long = DNA-binding protein Fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27bp DNA F1-8G (AAATTGGTTTGAATTTTGAGCCAATTT)
11.0	69.0	8.0	8.0
63.0	8.0	8.0	17.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
8.0	69.0	11.0	8.0

#ID = F3D15132
#Short = 5e3m_A
#Long = DNA-binding protein Fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27bp DNA F35 (AAATTAGTTTGAATCTCGAGCTAATTT)
73.0	7.0	9.0	7.0
0.0	0.0	96.0	0.0
7.0	66.0	7.0	16.0
24.0	24.0	24.0	24.0
8.0	81.0	7.0	0.0
9.0	7.0	73.0	7.0

#ID = F3D15133
#Short = 5e3m_AB
#Long = DNA-binding protein Fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27bp DNA F35 (AAATTAGTTTGAATCTCGAGCTAATTT)
84.0	3.0	6.0	3.0
0.0	0.0	96.0	0.0
3.0	72.0	7.0	14.0
24.0	24.0	24.0	24.0
3.0	84.0	6.0	3.0
1.0	0.0	92.0	3.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	87.0	3.0	3.0
88.0	3.0	3.0	2.0
24.0	24.0	24.0	24.0
84.0	3.0	6.0	3.0
0.0	96.0	0.0	0.0
3.0	3.0	6.0	84.0

#ID = F3D15134
#Short = 5e3n_AB
#Long = DNA-binding protein Fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27bp DNA F31 (AAATTTGTAGGAATTTTCTGCAAATTT)
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
6.0	78.0	6.0	6.0
24.0	24.0	24.0	24.0
0.0	15.0	68.0	13.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	82.0	6.0	8.0
16.0	61.0	6.0	13.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15135
#Short = 5e3n_B
#Long = DNA-binding protein Fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27bp DNA F31 (AAATTTGTAGGAATTTTCTGCAAATTT)
13.0	54.0	16.0	13.0
16.0	54.0	13.0	13.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15136
#Short = 5e3o_AB
#Long = DNA-binding protein Fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27bp DNA F32 (AAATTTGGAGGAATTTTCTCCAAATTT)
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
7.0	3.0	80.0	6.0
24.0	24.0	24.0	24.0
12.0	9.0	60.0	15.0
86.0	3.0	3.0	4.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	86.0	4.0	3.0
9.0	60.0	12.0	15.0
24.0	24.0	24.0	24.0
3.0	86.0	4.0	3.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15137
#Short = 5e3o_B
#Long = DNA-binding protein Fis
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27bp DNA F32 (AAATTTGGAGGAATTTTCTCCAAATTT)
8.0	69.0	11.0	8.0
10.0	61.0	17.0	8.0
24.0	24.0	24.0	24.0
8.0	72.0	8.0	8.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15138
#Short = 5e8i_D
#Long = Friend leukemia integration 1 transcription factor
#W = 6
#Organisms = Homo sapiens
#Description = Crystal structure of the DNA binding domain of human transcription factor FLI1 in complex with a 10-mer DNA ACCGGAAGTG
6.0	76.0	6.0	8.0
8.0	6.0	6.0	76.0
7.0	0.0	6.0	83.0
0.0	96.0	0.0	0.0
6.0	76.0	8.0	6.0
6.0	6.0	76.0	8.0

#ID = F3D15139
#Short = 5ed4_A
#Long = Response regulator
#W = 8
#Organisms = Mycobacterium tuberculosis
#Description = Structure of a PhoP-DNA complex
73.0	9.0	7.0	7.0
7.0	9.0	73.0	7.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
7.0	7.0	7.0	75.0
0.0	0.0	96.0	0.0
73.0	9.0	7.0	7.0

#ID = F3D15140
#Short = 5ed4_AB
#Long = Response regulator
#W = 16
#Organisms = Mycobacterium tuberculosis
#Description = Structure of a PhoP-DNA complex
4.0	90.0	1.0	1.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
5.0	0.0	90.0	1.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
61.0	7.0	4.0	24.0
15.0	15.0	46.0	20.0
1.0	71.0	1.0	23.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
1.0	1.0	60.0	34.0
67.0	0.0	28.0	1.0

#ID = F3D15141
#Short = 5ed4_EF
#Long = Response regulator
#W = 17
#Organisms = Mycobacterium tuberculosis
#Description = Structure of a PhoP-DNA complex
4.0	90.0	1.0	1.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
1.0	20.0	1.0	74.0
1.0	0.0	94.0	1.0
63.0	9.0	9.0	15.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
61.0	17.0	3.0	15.0
13.0	13.0	59.0	11.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
1.0	1.0	94.0	0.0
90.0	4.0	1.0	1.0

#ID = F3D15142
#Short = 5egb_A
#Long = Histone-lysine N-methyltransferase PRDM9
#W = 13
#Organisms = Homo sapiens
#Description = Human PRDM9 allele-A ZnF Domain with Associated Recombination Hotspot DNA Sequence II
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
1.0	0.0	13.0	82.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
68.0	0.0	15.0	13.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
54.0	13.0	16.0	13.0

#ID = F3D15143
#Short = 5eh2_F
#Long = Histone-lysine N-methyltransferase PRDM9
#W = 12
#Organisms = Homo sapiens
#Description = Human PRDM9 allele-A ZnF Domain with Associated Recombination Hotspot DNA Sequence III
19.0	38.0	20.0	19.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
76.0	1.0	19.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15144
#Short = 5ei9_F
#Long = Histone-lysine N-methyltransferase PRDM9
#W = 14
#Organisms = Homo sapiens
#Description = Human PRDM9 allele-A ZnF Domain with Associated Recombination Hotspot DNA Sequence I
13.0	16.0	13.0	54.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
82.0	0.0	13.0	1.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
68.0	13.0	15.0	0.0

#ID = F3D15145
#Short = 5flv_E
#Long = HOMEOBOX PROTEIN NKX-2.5, T-BOX TRANSCRIPTION FACT
#W = 13
#Organisms = Mus musculus
#Description = Crystal structure of NKX2-5 and TBX5 bound to the Nppa promoter region
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
15.0	68.0	0.0	13.0
13.0	9.0	13.0	61.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
75.0	6.0	9.0	6.0
96.0	0.0	0.0	0.0
6.0	0.0	82.0	8.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0

#ID = F3D15146
#Short = 5fur_ACGI
#Long = TATA-BOX-BINDING PROTEIN
#W = 8
#Organisms = Homo sapiens
#Description = Structure of human TFIID-IIA bound to core promoter DNA
6.0	76.0	8.0	6.0
0.0	0.0	0.0	96.0
6.0	6.0	6.0	78.0
6.0	6.0	6.0	78.0
7.0	0.0	6.0	83.0
76.0	6.0	6.0	8.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D15147
#Short = 5fyw_ABMORU
#Long = TRANSCRIPTION INITIATION FACTOR IIB
#W = 7
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Transcription initiation complex structures elucidate DNA opening (OC)
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
57.0	13.0	13.0	13.0
0.0	0.0	0.0	96.0
54.0	16.0	13.0	13.0

#ID = F3D15148
#Short = 5fz5_AMORUW
#Long = TRANSCRIPTION INITIATION FACTOR IIB
#W = 8
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Transcription initiation complex structures elucidate DNA opening (CC)
54.0	16.0	13.0	13.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
54.0	13.0	16.0	13.0

#ID = F3D15149
#Short = 5gat_A
#Long = NITROGEN REGULATORY PROTEIN AREA
#W = 4
#Organisms = Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
#Description = SOLUTION NMR STRUCTURE OF THE WILD TYPE DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13BP DNA CONTAINING A CGATA SITE, 35 STRUCTURES
96.0	0.0	0.0	0.0
16.0	13.0	13.0	54.0
0.0	96.0	0.0	0.0
16.0	13.0	54.0	13.0

#ID = F3D15150
#Short = 5ipl_F
#Long = RNA polymerase sigma factor RpoS
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = SigmaS-transcription initiation complex with 4-nt nascent RNA
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
11.0	9.0	67.0	9.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
11.0	9.0	67.0	9.0
11.0	9.0	9.0	67.0
0.0	0.0	96.0	0.0

#ID = F3D15151
#Short = 5ipm_F
#Long = RNA polymerase sigma factor RpoS
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = SigmaS-transcription initiation complex with 4-nt nascent RNA
0.0	0.0	0.0	96.0
74.0	7.0	7.0	8.0
8.0	8.0	10.0	70.0
8.0	10.0	70.0	8.0
1.0	92.0	1.0	2.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
7.0	8.0	74.0	7.0
0.0	0.0	0.0	96.0
21.0	21.0	31.0	23.0
18.0	18.0	18.0	42.0
13.0	13.0	57.0	13.0

#ID = F3D15152
#Short = 5ipn_F
#Long = RNA polymerase sigma factor RpoS
#W = 16
#Organisms = Escherichia coli (strain K12)
#Description = SigmaS-transcription initiation complex with 4-nt nascent RNA
0.0	0.0	0.0	96.0
80.0	6.0	5.0	5.0
5.0	5.0	5.0	81.0
5.0	5.0	80.0	6.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
5.0	6.0	80.0	5.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
6.0	5.0	5.0	80.0
6.0	5.0	80.0	5.0

#ID = F3D15153
#Short = 5iy6_AMPTV
#Long = Transcription initiation factor IIB
#W = 19
#Organisms = Homo sapiens
#Description = Human holo-PIC in the closed state
0.0	17.0	3.0	76.0
96.0	0.0	0.0	0.0
3.0	6.0	3.0	84.0
96.0	0.0	0.0	0.0
84.0	6.0	3.0	3.0
24.0	24.0	24.0	24.0
61.0	7.0	11.0	17.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
11.0	15.0	63.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	93.0	3.0
0.0	0.0	96.0	0.0
3.0	92.0	1.0	0.0

#ID = F3D15154
#Short = 5iy6_T
#W = 10
19.0	9.0	68.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	9.0	69.0	9.0
0.0	0.0	96.0	0.0
9.0	67.0	9.0	11.0

#ID = F3D15155
#Short = 5iy7_ABEMNPTV
#Long = Transcription initiation factor IIB
#W = 35
#Organisms = Homo sapiens
#Description = Human holo-PIC in the open state
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
92.0	0.0	0.0	4.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
12.0	10.0	68.0	6.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
10.0	10.0	65.0	11.0
0.0	96.0	0.0	0.0
3.0	3.0	85.0	5.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
11.0	10.0	10.0	65.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
9.0	6.0	6.0	75.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	3.0	87.0	3.0

#ID = F3D15156
#Short = 5iy8_ABEMNPTV
#Long = Transcription initiation factor IIB
#W = 61
#Organisms = Homo sapiens
#Description = Human holo-PIC in the initial transcribing state
6.0	6.0	5.0	79.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
6.0	79.0	7.0	4.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
8.0	8.0	10.0	70.0
6.0	6.0	7.0	77.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
2.0	2.0	3.0	89.0
0.0	0.0	0.0	96.0
3.0	2.0	2.0	89.0
2.0	1.0	0.0	93.0
2.0	2.0	3.0	89.0
0.0	0.0	0.0	96.0
2.0	3.0	2.0	89.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
79.0	6.0	6.0	5.0
2.0	89.0	3.0	2.0

#ID = F3D15157
#Short = 5iy8_T
#W = 5
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
13.0	57.0	13.0	13.0
24.0	24.0	24.0	24.0
13.0	13.0	13.0	57.0

#ID = F3D15158
#Short = 5iy9_ABEMNPTV
#Long = Transcription initiation factor IIB
#W = 62
#Organisms = Homo sapiens
#Description = Human holo-PIC in the initial transcribing state (no IIS)
0.0	2.0	3.0	91.0
96.0	0.0	0.0	0.0
0.0	2.0	2.0	92.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
89.0	2.0	2.0	3.0
89.0	2.0	3.0	2.0
2.0	2.0	90.0	2.0
6.0	5.0	79.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	94.0	2.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
2.0	2.0	2.0	90.0
7.0	6.0	6.0	77.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
2.0	3.0	2.0	89.0
6.0	7.0	6.0	77.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
77.0	4.0	9.0	6.0
2.0	90.0	2.0	2.0

#ID = F3D15159
#Short = 5iy9_T
#W = 5
16.0	13.0	54.0	13.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
13.0	13.0	13.0	57.0

#ID = F3D15160
#Short = 5iya_AMPT
#Long = Transcription initiation factor IIB
#W = 19
#Organisms = Homo sapiens
#Description = Human core-PIC in the closed state
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
7.0	7.0	7.0	75.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
73.0	9.0	7.0	7.0
0.0	0.0	96.0	0.0
7.0	7.0	75.0	7.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
7.0	7.0	73.0	9.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D15161
#Short = 5iya_T
#W = 10
9.0	9.0	69.0	9.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
9.0	9.0	69.0	9.0
0.0	0.0	96.0	0.0
9.0	67.0	11.0	9.0

#ID = F3D15162
#Short = 5iyb_ABEMNPT
#Long = Transcription initiation factor IIB
#W = 35
#Organisms = Homo sapiens
#Description = Human core-PIC in the open state
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
93.0	0.0	0.0	3.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
10.0	9.0	68.0	9.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
12.0	6.0	68.0	10.0
0.0	96.0	0.0	0.0
3.0	4.0	86.0	3.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
9.0	9.0	9.0	69.0
24.0	24.0	24.0	24.0
3.0	0.0	1.0	92.0
24.0	24.0	24.0	24.0
6.0	9.0	10.0	71.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	3.0	86.0	3.0

#ID = F3D15163
#Short = 5iyc_ABEMNPT
#Long = Transcription initiation factor IIB
#W = 38
#Organisms = Homo sapiens
#Description = Human core-PIC in the initial transcribing state
7.0	5.0	5.0	79.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
8.0	73.0	8.0	7.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
8.0	10.0	11.0	67.0
5.0	5.0	8.0	78.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
2.0	5.0	2.0	87.0
0.0	0.0	0.0	96.0
2.0	5.0	2.0	87.0
2.0	1.0	0.0	93.0
2.0	5.0	2.0	87.0
0.0	0.0	0.0	96.0
2.0	5.0	2.0	87.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0

#ID = F3D15164
#Short = 5iyc_T
#W = 5
9.0	9.0	67.0	11.0
0.0	0.0	96.0	0.0
11.0	67.0	9.0	9.0
24.0	24.0	24.0	24.0
11.0	9.0	9.0	67.0

#ID = F3D15165
#Short = 5iyd_ABEMNPT
#Long = Transcription initiation factor IIB
#W = 39
#Organisms = Homo sapiens
#Description = Human core-PIC in the initial transcribing state (no IIS)
0.0	2.0	4.0	90.0
96.0	0.0	0.0	0.0
2.0	2.0	2.0	90.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
90.0	2.0	2.0	2.0
88.0	2.0	2.0	4.0
2.0	2.0	90.0	2.0
8.0	5.0	77.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
2.0	0.0	90.0	4.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
2.0	2.0	2.0	90.0
5.0	6.0	5.0	80.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
4.0	2.0	2.0	88.0
5.0	5.0	6.0	80.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0

#ID = F3D15166
#Short = 5iyd_T
#W = 5
13.0	13.0	54.0	16.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
13.0	13.0	13.0	57.0

#ID = F3D15167
#Short = 6cro_A
#Long = LAMBDA CRO REPRESSOR
#W = 17
#Organisms = Enterobacteria phage lambda
#Description = CRYSTAL STRUCTURE OF LAMBDA-CRO BOUND TO A CONSENSUS OPERATOR AT 3.0 ANGSTROM RESOLUTION
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
7.0	9.0	7.0	73.0
0.0	96.0	0.0	0.0
75.0	7.0	7.0	7.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
9.0	7.0	7.0	73.0
0.0	0.0	96.0	0.0
73.0	7.0	7.0	9.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0

#ID = F3D15168
#Short = 6gat_A
#Long = NITROGEN REGULATORY PROTEIN AREA
#W = 6
#Organisms = Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
#Description = SOLUTION NMR STRUCTURE OF THE L22V MUTANT DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13 BP DNA CONTAINING A TGATA SITE, REGULARIZED MEAN STRUCTURE
11.0	67.0	9.0	9.0
24.0	24.0	24.0	24.0
67.0	9.0	9.0	11.0
9.0	9.0	9.0	69.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15169
#Short = 6pax_A
#Long = HOMEOBOX PROTEIN PAX-6
#W = 12
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF THE HUMAN PAX-6 PAIRED DOMAIN-DNA COMPLEX REVEALS A GENERAL MODEL FOR PAX PROTEIN-DNA INTERACTIONS
10.0	2.0	84.0	0.0
14.0	78.0	2.0	2.0
96.0	0.0	0.0	0.0
0.0	79.0	15.0	2.0
2.0	2.0	62.0	30.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
16.0	11.0	4.0	65.0
18.0	14.0	49.0	15.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D15170
#Short = 7gat_A
#Long = NITROGEN REGULATORY PROTEIN AREA
#W = 4
#Organisms = Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
#Description = SOLUTION NMR STRUCTURE OF THE L22V MUTANT DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13 BP DNA CONTAINING A TGATA SITE, 34 STRUCTURES
54.0	13.0	13.0	16.0
13.0	13.0	13.0	57.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D15171
#Short = 9ant_B
#Long = ANTENNAPEDIA HOMEODOMAIN
#W = 7
#Organisms = Drosophila melanogaster
#Description = ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
6.0	75.0	9.0	6.0
0.0	0.0	0.0	96.0
75.0	6.0	9.0	6.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
75.0	6.0	9.0	6.0
9.0	13.0	68.0	6.0

#ID = F3D07725
#Short = 1a1k_A
#Long = RADR ZIF268 VARIANT
#W = 8
#Organisms = Mus musculus
#Description = RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)
16.0	16.0	16.0	48.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
80.0	0.0	0.0	16.0
0.0	96.0	0.0	0.0
16.0	0.0	80.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D07736
#Short = 1an4_AB
#Long = PROTEIN (UPSTREAM STIMULATORY FACTOR)
#W = 13
#Organisms = Homo sapiens
#Description = STRUCTURE AND FUNCTION OF THE B/HLH/Z DOMAIN OF USF
80.0	0.0	16.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
16.0	48.0	16.0	16.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	80.0	16.0	0.0

#ID = F3D07740
#Short = 1b01_AB
#Long = TRANSCRIPTIONAL REPRESSOR COPG
#W = 6
#Organisms = Streptococcus agalactiae
#Description = TRANSCRIPTIONAL REPRESSOR COPG/DNA COMPLEX
0.0	0.0	0.0	96.0
0.0	16.0	80.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
16.0	80.0	0.0	0.0
16.0	16.0	48.0	16.0

#ID = F3D07751
#Short = 1by4_BC
#Long = PROTEIN (RETINOIC ACID RECEPTOR RXR-ALPHA)
#W = 13
#Organisms = Homo sapiens
#Description = STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNA
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
8.0	8.0	8.0	72.0
0.0	96.0	0.0	0.0
72.0	8.0	8.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	8.0	8.0	80.0
0.0	96.0	0.0	0.0
72.0	8.0	8.0	8.0

#ID = F3D07754
#Short = 1c7u_AB
#Long = MYOCYTE-SPECIFIC ENHANCER FACTOR 2A, C4 FORM
#W = 16
#Organisms = Homo sapiens
#Description = Complex of the DNA binding core domain of the transcription factor MEF2A with a 20mer oligonucleotide
0.0	96.0	0.0	0.0
8.0	8.0	72.0	8.0
24.0	24.0	24.0	24.0
16.0	56.0	16.0	8.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
16.0	16.0	48.0	16.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D07756
#Short = 1c9b_QR
#Long = TATA BOX BINDING PROTEIN
#W = 8
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF A HUMAN TBP CORE DOMAIN-HUMAN TFIIB CORE DOMAIN COMPLEX BOUND TO AN EXTENDED, MODIFIED ADENOVIRAL MAJOR LATE PROMOTER (ADMLP)
10.0	10.0	13.0	63.0
96.0	0.0	0.0	0.0
7.0	7.0	8.0	74.0
96.0	0.0	0.0	0.0
85.0	3.0	3.0	5.0
56.0	13.0	13.0	14.0
96.0	0.0	0.0	0.0
19.0	19.0	38.0	20.0

#ID = F3D07759
#Short = 1cgp_B
#Long = PROTEIN (CATABOLITE GENE ACTIVATOR PROTEIN (CAP))
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
18.0	18.0	42.0	18.0
3.0	3.0	5.0	85.0
12.0	60.0	12.0	12.0
67.0	9.0	11.0	9.0
13.0	63.0	10.0	10.0
92.0	2.0	1.0	1.0

#ID = F3D07768
#Short = 1d5y_A
#Long = ROB TRANSCRIPTION FACTOR
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF THE E. COLI ROB TRANSCRIPTION FACTOR IN COMPLEX WITH DNA
14.0	52.0	16.0	14.0
34.0	20.0	22.0	20.0
6.0	6.0	78.0	6.0
0.0	96.0	0.0	0.0
74.0	8.0	7.0	7.0
14.0	52.0	14.0	16.0

#ID = F3D07769
#Short = 1d5y_CD
#Long = ROB TRANSCRIPTION FACTOR
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF THE E. COLI ROB TRANSCRIPTION FACTOR IN COMPLEX WITH DNA
15.0	49.0	17.0	15.0
31.0	21.0	23.0	21.0
4.0	4.0	81.0	7.0
0.0	96.0	0.0	0.0
67.0	9.0	9.0	11.0
9.0	67.0	9.0	11.0

#ID = F3D07770
#Short = 1d66_AB
#Long = PROTEIN (GAL4)
#W = 17
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEX
9.0	67.0	9.0	11.0
6.0	6.0	78.0	6.0
4.0	7.0	81.0	4.0
48.0	16.0	16.0	16.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
3.0	85.0	3.0	5.0
7.0	74.0	8.0	7.0
0.0	0.0	96.0	0.0

#ID = F3D07773
#Short = 1dgc_A
#Long = PROTEIN (GCN4)
#W = 5
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = THE X-RAY STRUCTURE OF THE GCN4-BZIP BOUND TO ATF/CREB SITE DNA SHOWS THE COMPLEX DEPENDS ON DNA FLEXIBILITY
7.0	74.0	7.0	8.0
9.0	9.0	69.0	9.0
9.0	11.0	9.0	67.0
12.0	60.0	12.0	12.0
38.0	19.0	19.0	20.0

#ID = F3D07787
#Short = 1f5t_ABCD
#Long = DIPHTHERIA TOXIN REPRESSOR
#W = 15
#Organisms = Corynebacterium diphtheriae,strain ATCC 700971 / NCTC 13129 / Biotype gravis
#Description = DIPHTHERIA TOX REPRESSOR (C102D MUTANT) COMPLEXED WITH NICKEL AND DTXR CONSENSUS BINDING SEQUENCE
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
16.0	16.0	16.0	48.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
56.0	16.0	8.0	16.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
8.0	72.0	8.0	8.0
0.0	0.0	0.0	96.0

#ID = F3D07795
#Short = 1gd2_EF
#Long = TRANSCRIPTION FACTOR PAP1
#W = 12
#Organisms = Schizosaccharomyces pombe,Schizosaccharomyces pombe (strain 972 / ATCC 24843)
#Description = CRYSTAL STRUCTURE OF BZIP TRANSCRIPTION FACTOR PAP1 BOUND TO DNA
6.0	6.0	78.0	6.0
6.0	6.0	78.0	6.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
78.0	6.0	6.0	6.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
6.0	6.0	6.0	78.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
6.0	78.0	6.0	6.0

#ID = F3D07807
#Short = 1gxp_EF
#Long = PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTE
#W = 18
#Organisms = Escherichia coli (strain K12)
#Description = PHOB EFFECTOR DOMAIN IN COMPLEX WITH PHO BOX DNA.
8.0	72.0	8.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
12.0	68.0	8.0	8.0
4.0	4.0	4.0	84.0
4.0	4.0	0.0	88.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
4.0	0.0	4.0	88.0
8.0	8.0	72.0	8.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
84.0	4.0	4.0	4.0

#ID = F3D07827
#Short = 1hjb_E
#Long = CCAAT/ENHANCER BINDING PROTEIN BETA
#W = 4
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP DIMERIC BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
19.0	19.0	39.0	19.0
10.0	10.0	13.0	63.0
1.0	2.0	1.0	92.0
7.0	7.0	7.0	75.0

#ID = F3D07835
#Short = 1hw2_B
#Long = FATTY ACID METABOLISM REGULATOR PROTEIN
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA COLI
12.0	12.0	12.0	60.0
0.0	0.0	96.0	0.0
3.0	3.0	85.0	5.0
16.0	19.0	16.0	45.0
24.0	24.0	24.0	24.0
12.0	60.0	12.0	12.0
12.0	12.0	60.0	12.0

#ID = F3D07844
#Short = 1j59_B
#Long = CATABOLITE GENE ACTIVATOR PROTEIN (CAP)
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
6.0	6.0	78.0	6.0
0.0	0.0	0.0	96.0
6.0	78.0	6.0	6.0
78.0	6.0	6.0	6.0
6.0	78.0	6.0	6.0
78.0	6.0	6.0	6.0

#ID = F3D07848
#Short = 1jfs_A
#Long = PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = PURINE REPRESSOR MUTANT-HYPOXANTHINE-PURF OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
12.0	60.0	12.0	12.0
31.0	21.0	21.0	23.0
24.0	24.0	24.0	24.0
81.0	4.0	7.0	4.0
2.0	90.0	2.0	2.0
16.0	16.0	45.0	19.0

#ID = F3D07855
#Short = 1jnm_AB
#Long = PROTO-ONCOGENE C-JUN
#W = 8
#Organisms = Homo sapiens
#Description = Crystal Structure of the Jun/CRE Complex
0.0	0.0	0.0	96.0
8.0	8.0	72.0	8.0
80.0	8.0	0.0	8.0
8.0	72.0	8.0	8.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
8.0	72.0	8.0	8.0
96.0	0.0	0.0	0.0

#ID = F3D07859
#Short = 1k6o_B
#Long = Serum response factor
#W = 6
#Organisms = Homo sapiens
#Description = Crystal Structure of a Ternary SAP-1/SRF/c-fos SRE DNA Complex
6.0	6.0	6.0	78.0
6.0	78.0	6.0	6.0
0.0	96.0	0.0	0.0
78.0	6.0	6.0	6.0
6.0	6.0	6.0	78.0
78.0	6.0	6.0	6.0

#ID = F3D07860
#Short = 1k78_BI
#Long = C-ets-1 Protein
#W = 15
#Organisms = Mus musculus,Homo sapiens
#Description = Pax5(1-149)+Ets-1(331-440)+DNA
12.0	12.0	12.0	60.0
0.0	0.0	96.0	0.0
12.0	0.0	84.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
12.0	12.0	12.0	60.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D07884
#Short = 1lei_AB
#Long = NUCLEAR FACTOR NF-KAPPA-B P65 SUBUNIT
#W = 11
#Organisms = Mus musculus
#Description = The kB DNA sequence from the HLV-LTR functions as an allosteric regulator of HIV transcription
6.0	6.0	6.0	78.0
11.0	9.0	67.0	9.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
15.0	49.0	15.0	17.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
7.0	75.0	7.0	7.0
0.0	96.0	0.0	0.0
9.0	67.0	11.0	9.0

#ID = F3D07892
#Short = 1mdm_B
#Long = C-ETS-1 PROTEIN
#W = 6
#Organisms = Mus musculus
#Description = INHIBITED FRAGMENT OF ETS-1 AND PAIRED DOMAIN OF PAX5 BOUND TO DNA
19.0	20.0	19.0	38.0
24.0	24.0	24.0	24.0
11.0	9.0	9.0	67.0
1.0	92.0	1.0	2.0
0.0	96.0	0.0	0.0
6.0	6.0	78.0	6.0

#ID = F3D07894
#Short = 1mdy_CD
#Long = PROTEIN (MYOD BHLH DOMAIN)
#W = 7
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF MYOD BHLH DOMAIN BOUND TO DNA: PERSPECTIVES ON DNA RECOGNITION AND IMPLICATIONS FOR TRANSCRIPTIONAL ACTIVATION
38.0	19.0	19.0	20.0
0.0	96.0	0.0	0.0
74.0	8.0	7.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0

#ID = F3D07907
#Short = 1mnm_ABCD
#Long = PROTEIN (MCM1 TRANSCRIPTIONAL REGULATOR)
#W = 23
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = YEAST MATALPHA2/MCM1/DNA TERNARY TRANSCRIPTION COMPLEX CRYSTAL STRUCTURE
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
84.0	4.0	4.0	4.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
4.0	4.0	4.0	84.0
4.0	84.0	4.0	4.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
76.0	8.0	4.0	8.0
8.0	8.0	8.0	72.0
0.0	0.0	0.0	96.0
84.0	4.0	4.0	4.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
84.0	4.0	4.0	4.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D07920
#Short = 1o3s_A
#Long = CATABOLITE GENE ACTIVATOR PROTEIN
#W = 4
#Organisms = Escherichia coli (strain K12)
#Description = PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
0.0	0.0	0.0	96.0
0.0	84.0	0.0	12.0
12.0	12.0	60.0	12.0
12.0	60.0	12.0	12.0

#ID = F3D07927
#Short = 1owr_N
#Long = Nuclear factor of activated T-cells, cytoplasmic 2
#W = 4
#Organisms = Homo sapiens
#Description = CRYSTAL STRUCTURE OF HUMAN NFAT1 BOUND MONOMERICALLY TO DNA
16.0	16.0	19.0	45.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
11.0	67.0	9.0	9.0

#ID = F3D07931
#Short = 1p7h_LN
#Long = Nuclear factor of activated T-cells, cytoplasmic 2
#W = 13
#Organisms = Homo sapiens
#Description = Structure of NFAT1 bound as a dimer to the HIV-1 LTR kB element
0.0	8.0	8.0	80.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
64.0	8.0	8.0	16.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
24.0	0.0	72.0	0.0
64.0	8.0	16.0	8.0

#ID = F3D07938
#Short = 1pyi_AB
#Long = PROTEIN (PYRIMIDINE PATHWAY REGULATOR 1)
#W = 12
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = CRYSTAL STRUCTURE OF A PPR1-DNA COMPLEX: DNA RECOGNITION BY PROTEINS CONTAINING A ZN2CYS6 BINUCLEAR CLUSTER
8.0	70.0	8.0	10.0
8.0	8.0	70.0	10.0
2.0	2.0	88.0	4.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
12.0	60.0	12.0	12.0
19.0	39.0	19.0	19.0
14.0	14.0	54.0	14.0

#ID = F3D07943
#Short = 1qn5_B
#Long = TRANSCRIPTION INITIATION FACTOR TFIID-1
#W = 8
#Organisms = Arabidopsis thaliana
#Description = CRYSTAL STRUCTURE OF THE G(-26) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
14.0	52.0	16.0	14.0
0.0	0.0	0.0	96.0
9.0	67.0	11.0	9.0
2.0	2.0	4.0	88.0
0.0	0.0	0.0	96.0
67.0	9.0	9.0	11.0
0.0	0.0	0.0	96.0
85.0	3.0	3.0	5.0

#ID = F3D07957
#Short = 1qqa_A
#Long = PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR)
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
4.0	81.0	4.0	7.0
38.0	19.0	20.0	19.0
24.0	24.0	24.0	24.0
21.0	23.0	31.0	21.0
2.0	88.0	2.0	4.0
12.0	12.0	60.0	12.0

#ID = F3D07967
#Short = 1r8d_AB
#Long = transcription activator MtaN
#W = 19
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal Structure of MtaN Bound to DNA
8.0	72.0	8.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
16.0	16.0	8.0	56.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
16.0	16.0	48.0	16.0

#ID = F3D07991
#Short = 1trr_JK
#Long = PROTEIN (TRP REPRESSOR)
#W = 14
#Organisms = Escherichia coli (strain K12)
#Description = TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
6.0	6.0	6.0	78.0
24.0	24.0	24.0	24.0
6.0	78.0	6.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	78.0	6.0	6.0
6.0	12.0	78.0	0.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0

#ID = F3D07992
#Short = 1ttu_A
#Long = lin-12 And Glp-1 transcriptional regulator
#W = 5
#Organisms = Caenorhabditis elegans
#Description = Crystal Structure of CSL bound to DNA
0.0	0.0	12.0	84.0
12.0	60.0	12.0	12.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
60.0	12.0	12.0	12.0

#ID = F3D07996
#Short = 1vkx_B
#Long = PROTEIN (NF-KAPPA B P50 SUBUNIT)
#W = 5
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF THE NFKB P50/P65 HETERODIMER COMPLEXED TO THE IMMUNOGLOBULIN KB DNA
2.0	2.0	88.0	4.0
0.0	0.0	0.0	96.0
7.0	81.0	4.0	4.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D07998
#Short = 1vpw_A
#Long = PURINE REPRESSOR
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = STRUCTURE OF THE PURR MUTANT, L54M, BOUND TO HYPOXANTHINE AND PURF OPERATOR DNA
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
7.0	74.0	7.0	8.0
45.0	16.0	19.0	16.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
4.0	84.0	4.0	4.0
7.0	7.0	74.0	8.0

#ID = F3D08011
#Short = 1z9c_AB
#Long = Organic hydroperoxide resistance transcriptional r
#W = 20
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of OhrR bound to the ohrA promoter: Structure of MarR family protein with operator DNA
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
81.0	6.0	6.0	3.0
96.0	0.0	0.0	0.0
3.0	3.0	3.0	87.0
24.0	24.0	24.0	24.0
12.0	12.0	69.0	3.0
3.0	3.0	3.0	87.0
84.0	3.0	3.0	6.0
24.0	24.0	24.0	24.0
90.0	0.0	0.0	6.0
3.0	84.0	3.0	6.0
24.0	24.0	24.0	24.0
87.0	3.0	3.0	3.0
0.0	0.0	3.0	93.0
3.0	3.0	3.0	87.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D08014
#Short = 1zaa_C
#Long = PROTEIN (ZIF268)
#W = 10
#Organisms = Mus musculus
#Description = ZINC FINGER-DNA RECOGNITION: CRYSTAL STRUCTURE OF A ZIF268-DNA COMPLEX AT 2.1 ANGSTROMS
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	80.0	16.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	80.0	0.0	16.0
0.0	0.0	96.0	0.0
16.0	16.0	16.0	48.0

#ID = F3D08015
#Short = 1zay_A
#Long = PROTEIN (PURINE REPRESSOR)
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = PURINE REPRESSOR-HYPOXANTHINE-MODIFIED-PURF-OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
67.0	9.0	9.0	11.0
52.0	14.0	16.0	14.0
24.0	24.0	24.0	24.0
81.0	7.0	4.0	4.0
0.0	0.0	0.0	96.0

#ID = F3D08022
#Short = 1zgw_A
#Long = Ada polyprotein
#W = 12
#Organisms = Escherichia coli (strain K12)
#Description = NMR structure of E. Coli Ada protein in complex with DNA
16.0	8.0	16.0	56.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	16.0	16.0	64.0
8.0	8.0	8.0	72.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D08026
#Short = 1zrd_B
#Long = Catabolite gene activator
#W = 5
#Organisms = Escherichia coli (strain K12)
#Description = 4 crystal structures of CAP-DNA with all base-pair substitutions at position 6, CAP-[6A;17T]ICAP38 DNA
0.0	0.0	0.0	96.0
12.0	84.0	0.0	0.0
12.0	12.0	12.0	60.0
12.0	60.0	12.0	12.0
96.0	0.0	0.0	0.0

#ID = F3D08031
#Short = 2as5_FN
#Long = Forkhead box protein P2
#W = 13
#Organisms = Homo sapiens
#Description = Structure of the DNA binding domains of NFAT and FOXP2 bound specifically to DNA.
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
56.0	8.0	24.0	8.0
24.0	24.0	24.0	24.0
56.0	16.0	16.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
8.0	8.0	8.0	72.0

#ID = F3D08043
#Short = 2c9n_Y
#Long = BZLF1 TRANS-ACTIVATOR PROTEIN
#W = 5
#Organisms = Epstein-Barr virus (strain B95-8) (HHV-4),Human herpesvirus 4
#Description = STRUCTURE OF THE EPSTEIN-BARR VIRUS ZEBRA PROTEIN AT APPROXIMATELY 3.5 ANGSTROM RESOLUTION
56.0	13.0	13.0	14.0
20.0	34.0	22.0	20.0
11.0	9.0	9.0	67.0
12.0	60.0	12.0	12.0
67.0	9.0	11.0	9.0

#ID = F3D08052
#Short = 2er8_AB
#Long = Regulatory protein LEU3
#W = 9
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Crystal Structure of Leu3 DNA-binding domain complexed with a 12mer DNA duplex
10.0	63.0	13.0	10.0
4.0	4.0	81.0	7.0
2.0	2.0	88.0	4.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	81.0	4.0	7.0
6.0	78.0	6.0	6.0
9.0	11.0	67.0	9.0
16.0	16.0	48.0	16.0

#ID = F3D08055
#Short = 2ere_B
#Long = Regulatory protein LEU3
#W = 4
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Crystal Structure of a Leu3 DNA-binding domain complexed with a 15mer DNA duplex
3.0	85.0	5.0	3.0
7.0	74.0	8.0	7.0
8.0	8.0	72.0	8.0
18.0	18.0	42.0	18.0

#ID = F3D08056
#Short = 2erg_A
#Long = Regulatory protein LEU3
#W = 4
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Crystal Structure of Leu3 DNA-binding domain with a single H50C mutation complexed with a 15mer DNA duplex
18.0	42.0	18.0	18.0
10.0	63.0	13.0	10.0
6.0	6.0	78.0	6.0
3.0	3.0	85.0	5.0

#ID = F3D08059
#Short = 2fio_AB
#Long = Late genes activator
#W = 31
#Organisms = Bacillus phage phi29
#Description = Phage phi29 transcription regulator p4-DNA complex
96.0	0.0	0.0	0.0
64.0	16.0	16.0	0.0
0.0	96.0	0.0	0.0
16.0	16.0	16.0	48.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0

#ID = F3D08063
#Short = 2h8r_AB
#Long = Hepatocyte nuclear factor 1-beta
#W = 15
#Organisms = Homo sapiens
#Description = Hepatocyte Nuclear Factor 1b bound to DNA: MODY5 Gene Product
16.0	16.0	16.0	48.0
8.0	8.0	72.0	8.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
16.0	8.0	16.0	56.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D08073
#Short = 2i9t_AB
#Long = Transcription factor p65
#W = 10
#Organisms = Mus musculus
#Description = Structure of NF-kB p65-p50 heterodimer bound to PRDII element of B-interferon promoter
1.0	2.0	92.0	1.0
0.0	0.0	95.0	1.0
62.0	12.0	9.0	13.0
39.0	19.0	19.0	19.0
24.0	24.0	24.0	24.0
10.0	11.0	9.0	66.0
12.0	12.0	14.0	58.0
2.0	91.0	2.0	1.0
0.0	95.0	0.0	1.0
6.0	80.0	7.0	3.0

#ID = F3D08078
#Short = 2it0_B
#Long = Iron-dependent repressor ideR
#W = 6
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = Crystal structure of a two-domain IdeR-DNA complex crystal form II
8.0	8.0	8.0	72.0
8.0	8.0	8.0	72.0
96.0	0.0	0.0	0.0
8.0	8.0	72.0	8.0
8.0	0.0	88.0	0.0
0.0	8.0	88.0	0.0

#ID = F3D08079
#Short = 2jp9_A
#Long = Wilms tumor 1
#W = 14
#Organisms = Homo sapiens
#Description = Structure of the Wilms Tumor Suppressor Protein Zinc Finger Domain Bound to DNA
0.0	0.0	96.0	0.0
12.0	48.0	12.0	24.0
48.0	12.0	12.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D08103
#Short = 2pub_A
#Long = PURINE REPRESSOR
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
12.0	60.0	12.0	12.0
31.0	21.0	21.0	23.0
24.0	24.0	24.0	24.0
81.0	4.0	7.0	4.0
0.0	96.0	0.0	0.0
16.0	19.0	45.0	16.0

#ID = F3D08104
#Short = 2puc_A
#Long = PROTEIN (PURINE REPRESSOR)
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
12.0	60.0	12.0	12.0
31.0	21.0	21.0	23.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
4.0	81.0	7.0	4.0
16.0	19.0	45.0	16.0

#ID = F3D08108
#Short = 2pug_A
#Long = PROTEIN (PURINE REPRESSOR)
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
12.0	60.0	12.0	12.0
31.0	21.0	21.0	23.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
2.0	88.0	4.0	2.0
16.0	19.0	45.0	16.0

#ID = F3D08112
#Short = 2r5y_AB
#Long = Homeotic protein Sex combs reduced
#W = 10
#Organisms = Drosophila melanogaster
#Description = Structure of Scr/Exd complex bound to a consensus Hox-Exd site
0.0	96.0	0.0	0.0
24.0	48.0	12.0	12.0
48.0	12.0	24.0	12.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D08113
#Short = 2r5y_B
#Long = Homeobox protein extradenticle
#W = 5
#Organisms = Drosophila melanogaster
#Description = Structure of Scr/Exd complex bound to a consensus Hox-Exd site
24.0	0.0	12.0	60.0
48.0	12.0	24.0	12.0
12.0	0.0	0.0	84.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D08116
#Short = 2stw_A
#Long = ETS1
#W = 4
#Organisms = Homo sapiens
#Description = SOLUTION NMR STRUCTURE OF THE HUMAN ETS1/DNA COMPLEX, RESTRAINED REGULARIZED MEAN STRUCTURE
1.0	92.0	1.0	2.0
0.0	96.0	0.0	0.0
7.0	7.0	74.0	8.0
10.0	13.0	63.0	10.0

#ID = F3D08125
#Short = 2ypa_AB
#Long = T-CELL ACUTE LYMPHOCYTIC LEUKEMIA PROTEIN 1
#W = 8
#Organisms = Homo sapiens
#Description = Structure of the SCL:E47:LMO2:LDB1 complex bound to DNA
60.0	12.0	12.0	12.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
12.0	0.0	0.0	84.0
0.0	0.0	96.0	0.0
12.0	12.0	60.0	12.0

#ID = F3D08135
#Short = 3clc_B
#Long = Regulatory protein
#W = 5
#Organisms = Enterobacter sp,Enterobacter sp. RFL1396
#Description = Crystal Structure of the Restriction-Modification Controller Protein C.Esp1396I Tetramer in Complex with its Natural 35 Base-Pair Operator
0.0	96.0	0.0	0.0
4.0	7.0	81.0	4.0
12.0	12.0	60.0	12.0
33.0	21.0	21.0	21.0
14.0	52.0	14.0	16.0

#ID = F3D08150
#Short = 3dnv_AB
#Long = HTH-type transcriptional regulator hipB
#W = 4
#Organisms = Escherichia coli (strain K12)
#Description = MDT Protein
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
9.0	9.0	9.0	69.0
19.0	38.0	20.0	19.0

#ID = F3D08174
#Short = 3g8u_B
#Long = Glucocorticoid receptor
#W = 5
#Organisms = Rattus norvegicus
#Description = DNA binding domain:GilZ 16bp complex-5
3.0	3.0	87.0	3.0
9.0	9.0	67.0	11.0
19.0	19.0	19.0	39.0
22.0	22.0	22.0	30.0
14.0	54.0	14.0	14.0

#ID = F3D08178
#Short = 3g99_AB
#Long = Glucocorticoid receptor
#W = 11
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:Pal complex-9
65.0	12.0	10.0	9.0
3.0	85.0	5.0	3.0
56.0	15.0	14.0	11.0
23.0	22.0	24.0	27.0
23.0	20.0	25.0	28.0
26.0	21.0	24.0	25.0
11.0	13.0	16.0	56.0
5.0	4.0	84.0	3.0
18.0	18.0	22.0	38.0
23.0	23.0	25.0	25.0
10.0	59.0	11.0	16.0

#ID = F3D08182
#Short = 3g9j_AB
#Long = Glucocorticoid receptor
#W = 15
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:Pal, 18bp complex-36
6.0	66.0	6.0	18.0
60.0	12.0	12.0	12.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
84.0	6.0	6.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
12.0	12.0	18.0	54.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0

#ID = F3D08183
#Short = 3g9j_B
#Long = Glucocorticoid receptor
#W = 7
#Organisms = Rattus norvegicus
#Description = GR DNA binding domain:Pal, 18bp complex-36
12.0	48.0	12.0	24.0
48.0	24.0	12.0	12.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D08189
#Short = 3gut_ABD
#Long = Transcription factor p65
#W = 18
#Organisms = Homo sapiens
#Description = Crystal structure of a higher-order complex of p50:RelA bound to the HIV-1 LTR
0.0	0.0	90.0	6.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
6.0	78.0	6.0	6.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
6.0	6.0	6.0	78.0
0.0	96.0	0.0	0.0
6.0	78.0	6.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
84.0	6.0	6.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D08210
#Short = 3jre_AB
#Long = DNA-binding protein fis
#W = 17
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of Fis bound to 27 bp DNA F26 containing A-tract at center
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
6.0	78.0	6.0	6.0
24.0	24.0	24.0	24.0
6.0	78.0	6.0	6.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	78.0	6.0	6.0
78.0	6.0	6.0	6.0
24.0	24.0	24.0	24.0
78.0	6.0	6.0	6.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D08234
#Short = 3lap_AD
#Long = Arginine repressor
#W = 13
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-canavanine.
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
78.0	6.0	6.0	6.0
0.0	0.0	0.0	96.0
78.0	6.0	6.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	78.0	6.0
96.0	0.0	0.0	0.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D08235
#Short = 3lap_BF
#Long = Arginine repressor
#W = 13
#Organisms = Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
#Description = The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-canavanine.
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
78.0	6.0	6.0	6.0
0.0	0.0	0.0	96.0
6.0	78.0	6.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
96.0	0.0	0.0	0.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
78.0	6.0	6.0	6.0

#ID = F3D08247
#Short = 3n97_ABC
#Long = RNA polymerase sigma factor
#W = 5
#Organisms = Thermus aquaticus
#Description = RNA polymerase alpha C-terminal domain (E. coli) and sigma region 4 (T. aq. mutant) bound to (UP,-35 element) DNA
4.0	81.0	7.0	4.0
3.0	3.0	5.0	85.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D08252
#Short = 3oqn_AC
#Long = Catabolite control protein A
#W = 14
#Organisms = Bacillus subtilis,strain 168
#Description = Structure of ccpa-hpr-ser46-p-gntr-down cre
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
6.0	6.0	78.0	6.0
24.0	24.0	24.0	24.0
78.0	6.0	6.0	6.0
6.0	78.0	6.0	6.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
6.0	6.0	6.0	78.0
6.0	6.0	6.0	78.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D08263
#Short = 3qsv_AD
#Long = Mothers against decapentaplegic homolog 4
#W = 8
#Organisms = Mus musculus
#Description = Structural basis for DNA recognition by constitutive Smad4 MH1 dimers
0.0	0.0	96.0	0.0
12.0	12.0	24.0	48.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
48.0	12.0	24.0	12.0
0.0	96.0	0.0	0.0

#ID = F3D08274
#Short = 3u3w_AB
#Long = Transcriptional activator PlcR protein
#W = 16
#Organisms = Bacillus thuringiensis,Bacillus thuringiensis Bt407
#Description = Crystal Structure of Bacillus thuringiensis PlcR in complex with the peptide PapR7 and DNA
16.0	8.0	8.0	64.0
56.0	8.0	24.0	8.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
64.0	16.0	8.0	8.0

#ID = F3D08280
#Short = 3vek_F
#Long = Erythroid transcription factor
#W = 10
#Organisms = Mus musculus
#Description = Both Zn Fingers of GATA1 Bound to Palindromic DNA Recognition Site, P1 Crystal Form
6.0	6.0	6.0	78.0
4.0	4.0	4.0	84.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
6.0	78.0	6.0	6.0
96.0	0.0	0.0	0.0
7.0	8.0	74.0	7.0
88.0	2.0	4.0	2.0
13.0	13.0	14.0	56.0
19.0	19.0	39.0	19.0

#ID = F3D08310
#Short = 4atk_B
#Long = MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR
#W = 5
#Organisms = Mus musculus
#Description = MITF:E-box complex
4.0	81.0	7.0	4.0
9.0	9.0	67.0	11.0
2.0	2.0	2.0	90.0
0.0	0.0	96.0	0.0
15.0	49.0	15.0	17.0

#ID = F3D08312
#Short = 4auw_E
#Long = TRANSCRIPTION FACTOR MAFB
#W = 8
#Organisms = Mus musculus
#Description = CRYSTAL STRUCTURE OF THE BZIP HOMODIMERIC MAFB IN COMPLEX WITH THE C- MARE BINDING SITE
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
16.0	16.0	8.0	56.0
16.0	48.0	16.0	16.0
72.0	8.0	8.0	8.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D08332
#Short = 4f2j_C
#Long = Zinc finger protein 217
#W = 5
#Organisms = Homo sapiens
#Description = Crystal structure of ZNF217 bound to DNA, P6522 crystal form
9.0	9.0	9.0	69.0
4.0	4.0	84.0	4.0
21.0	33.0	21.0	21.0
60.0	12.0	12.0	12.0
0.0	0.0	96.0	0.0

#ID = F3D08333
#Short = 4f6n_A
#Long = Transcriptional regulator Kaiso
#W = 9
#Organisms = Homo sapiens
#Description = Crystal structure of Kaiso zinc finger DNA binding protein in complex with methylated CpG site DNA
13.0	57.0	13.0	13.0
24.0	24.0	24.0	24.0
8.0	74.0	7.0	7.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
10.0	10.0	10.0	66.0
19.0	38.0	20.0	19.0

#ID = F3D08348
#Short = 4ihv_B
#Long = DNA-binding protein fis
#W = 6
#Organisms = Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)
#Description = Crystal structure of Fis bound to 27 bp sequence DNA F28 (AAATTTGTTTGAGCGTTGAGCAAATTT)
13.0	57.0	13.0	13.0
34.0	20.0	22.0	20.0
24.0	24.0	24.0	24.0
54.0	14.0	14.0	14.0
8.0	70.0	8.0	10.0
74.0	7.0	8.0	7.0

#ID = F3D08356
#Short = 4iqr_EF
#Long = Hepatocyte nuclear factor 4-alpha
#W = 12
#Organisms = Homo sapiens
#Description = Multi-Domain Organization of the HNF4alpha Nuclear Receptor Complex on DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
78.0	6.0	6.0	6.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
6.0	6.0	6.0	78.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
6.0	6.0	78.0	6.0
78.0	6.0	6.0	6.0
0.0	96.0	0.0	0.0
6.0	78.0	6.0	6.0

#ID = F3D08362
#Short = 4iwr_F
#Long = Regulatory protein
#W = 5
#Organisms = Enterobacter sp. RFL1396
#Description = C.Esp1396I bound to a 25 base pair operator site
0.0	96.0	0.0	0.0
12.0	12.0	60.0	12.0
0.0	0.0	96.0	0.0
84.0	12.0	0.0	0.0
12.0	60.0	12.0	12.0

#ID = F3D08370
#Short = 4kdp_AB
#Long = TcaR transcription regulator
#W = 11
#Organisms = Staphylococcus epidermidis,strain ATCC 12228
#Description = TcaR-ssDNA complex crystal structure reveals the novel ssDNA binding mechanism of the MarR family proteins
4.0	81.0	4.0	7.0
0.0	0.0	96.0	0.0
9.0	67.0	11.0	9.0
96.0	0.0	0.0	0.0
9.0	11.0	67.0	9.0
19.0	38.0	19.0	20.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
88.0	4.0	2.0	2.0

#ID = F3D08387
#Short = 4lln_IJ
#Long = MepR
#W = 20
#Organisms = Staphylococcus aureus
#Description = Crystal structure of S. aureus MepR-DNA complex
0.0	0.0	0.0	96.0
4.0	4.0	4.0	84.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	4.0	4.0	88.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
0.0	4.0	88.0	4.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
8.0	8.0	8.0	72.0
4.0	84.0	4.0	4.0
0.0	0.0	0.0	96.0
72.0	8.0	8.0	8.0
68.0	8.0	8.0	12.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D08393
#Short = 4nnu_AB
#Long = Transcription factor A, mitochondrial
#W = 40
#Organisms = Homo sapiens
#Description = Distinct structural features of TFAM drive mitochondrial DNA packaging versus transcriptional activation
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
16.0	56.0	16.0	8.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	0.0	96.0	0.0
16.0	16.0	16.0	48.0
8.0	8.0	8.0	72.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0

#ID = F3D08395
#Short = 4nod_ABGH
#Long = Transcription factor A, mitochondrial
#W = 77
#Organisms = Homo sapiens
#Description = Distinct structural features of TFAM drive mitochondrial DNA packaging versus transcriptional activation
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	78.0	6.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D08412
#Short = 4pu3_ABCD
#Long = Toxin-antitoxin system antidote transcriptional re
#W = 15
#Organisms = Shewanella oneidensis,strain MR-1
#Description = Shewanella oneidensis MR-1 Toxin Antitoxin System HipA, HipB and its operator DNA complex (space group P212121)
0.0	0.0	0.0	96.0
24.0	24.0	24.0	24.0
0.0	0.0	0.0	96.0
8.0	8.0	72.0	8.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
8.0	56.0	16.0	16.0
16.0	48.0	16.0	16.0
0.0	96.0	0.0	0.0
0.0	0.0	0.0	96.0

#ID = F3D08417
#Short = 4r2e_A
#Long = Wilms tumor protein, isoform 4/CRA_a
#W = 10
#Organisms = Homo sapiens
#Description = Wilms Tumor Protein (WT1) zinc fingers in complex with methylated DNA
54.0	14.0	14.0	14.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
2.0	92.0	1.0	1.0
2.0	88.0	2.0	4.0
96.0	0.0	0.0	0.0
10.0	70.0	8.0	8.0
1.0	1.0	92.0	2.0
9.0	69.0	9.0	9.0

#ID = F3D08420
#Short = 4r2s_A
#Long = Wilms tumor protein, isoform 4/CRA_a
#W = 10
#Organisms = Homo sapiens
#Description = Wilms Tumor Protein (WT1) Q369P zinc fingers in complex with methylated DNA
56.0	13.0	13.0	14.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
4.0	88.0	2.0	2.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
7.0	74.0	7.0	8.0
0.0	0.0	96.0	0.0
9.0	69.0	9.0	9.0

#ID = F3D08421
#Short = 4tnt_AB
#Long = Mineralocorticoid receptor
#W = 13
#Organisms = Homo sapiens
#Description = Structure of the human mineralocorticoid receptor in complex with DNA
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
60.0	12.0	12.0	12.0
0.0	96.0	0.0	0.0
60.0	12.0	12.0	12.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	12.0	0.0	84.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0

#ID = F3D08426
#Short = 4uus_F
#Long = HOMEOTIC PROTEIN EXTRADENTICLE
#W = 4
#Organisms = Drosophila melanogaster
#Description = CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING THE UBDA MOTIF
16.0	0.0	16.0	64.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
16.0	16.0	16.0	48.0

#ID = F3D08427
#Short = 4uuv_AM
#Long = ETS TRANSLOCATION VARIANT 4
#W = 18
#Organisms = Homo sapiens
#Description = Structure of the DNA binding ETS domain of human ETV4 in complex with DNA
48.0	16.0	16.0	16.0
0.0	96.0	0.0	0.0
8.0	16.0	16.0	56.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
0.0	0.0	96.0	0.0
8.0	8.0	8.0	72.0

#ID = F3D08441
#Short = 4x4b_C
#Long = Regulatory protein
#W = 4
#Organisms = Enterobacter sp. RFL1396
#Description = RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 2.1 MGy
0.0	96.0	0.0	0.0
54.0	13.0	13.0	16.0
0.0	96.0	0.0	0.0
54.0	13.0	13.0	16.0

#ID = F3D09606
#Short = 1a1f_A
#Long = THREE-FINGER ZIF268 PEPTIDE
#W = 10
#Organisms = Mus musculus
#Description = DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)
12.0	12.0	60.0	12.0
12.0	12.0	60.0	12.0
0.0	0.0	0.0	96.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
12.0	0.0	84.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D09615
#Short = 1a6y_A
#Long = ORPHAN NUCLEAR RECEPTOR NR1D1
#W = 5
#Organisms = Homo sapiens
#Description = REVERBA ORPHAN NUCLEAR RECEPTOR/DNA COMPLEX
0.0	0.0	96.0	0.0
36.0	24.0	24.0	12.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0
0.0	36.0	12.0	48.0

#ID = F3D09624
#Short = 1an2_A
#Long = PROTEIN (TRANSCRIPTION FACTOR MAX (TF MAX))
#W = 4
#Organisms = Homo sapiens
#Description = RECOGNITION BY MAX OF ITS COGNATE DNA THROUGH A DIMERIC B/HLH/Z DOMAIN
0.0	96.0	0.0	0.0
4.0	4.0	81.0	7.0
0.0	0.0	0.0	96.0
16.0	16.0	48.0	16.0

#ID = F3D09625
#Short = 1an4_A
#Long = PROTEIN (UPSTREAM STIMULATORY FACTOR)
#W = 6
#Organisms = Homo sapiens
#Description = STRUCTURE AND FUNCTION OF THE B/HLH/Z DOMAIN OF USF
12.0	12.0	60.0	12.0
0.0	0.0	12.0	84.0
0.0	0.0	96.0	0.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
12.0	60.0	12.0	12.0

#ID = F3D09639
#Short = 1bc8_C
#Long = PROTEIN (SAP-1 ETS DOMAIN)
#W = 5
#Organisms = Homo sapiens
#Description = STRUCTURES OF SAP-1 BOUND TO DNA SEQUENCES FROM THE E74 AND C-FOS PROMOTERS PROVIDE INSIGHTS INTO HOW ETS PROTEINS DISCRIMINATE BETWEEN RELATED DNA TARGETS
0.0	80.0	0.0	16.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
80.0	0.0	16.0	0.0
48.0	16.0	16.0	16.0

#ID = F3D09643
#Short = 1bdt_C
#Long = PROTEIN (GENE-REGULATING PROTEIN ARC)
#W = 7
#Organisms = Enterobacteria phage P22
#Description = WILD TYPE GENE-REGULATING PROTEIN ARC/DNA COMPLEX
13.0	14.0	13.0	56.0
24.0	24.0	24.0	24.0
34.0	20.0	20.0	22.0
16.0	14.0	14.0	52.0
96.0	0.0	0.0	0.0
4.0	7.0	81.0	4.0
85.0	3.0	5.0	3.0

#ID = F3D09644
#Short = 1bdv_A
#Long = PROTEIN (ARC FV10 REPRESSOR)
#W = 4
#Organisms = Enterobacteria phage P22
#Description = ARC FV10 COCRYSTAL
4.0	7.0	4.0	81.0
7.0	74.0	7.0	8.0
0.0	0.0	0.0	96.0
60.0	12.0	12.0	12.0

#ID = F3D09648
#Short = 1bvo_A
#Long = TRANSCRIPTION FACTOR GAMBIF1
#W = 5
#Organisms = Anopheles funestus,Anopheles gambiae
#Description = DORSAL HOMOLOGUE GAMBIF1 BOUND TO DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
74.0	7.0	7.0	8.0

#ID = F3D09661
#Short = 1ckt_A
#Long = HIGH MOBILITY GROUP 1 PROTEIN
#W = 4
#Organisms = Rattus norvegicus
#Description = CRYSTAL STRUCTURE OF HMG1 DOMAIN A BOUND TO A CISPLATIN-MODIFIED DNA DUPLEX
19.0	19.0	39.0	19.0
13.0	13.0	13.0	57.0
0.0	96.0	0.0	0.0
0.0	96.0	0.0	0.0

#ID = F3D09700
#Short = 1gcc_A
#Long = ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
#W = 9
#Organisms = Arabidopsis thaliana
#Description = SOLUTION NMR STRUCTURE OF THE COMPLEX OF GCC-BOX BINDING DOMAIN OF ATERF1 AND GCC-BOX DNA, MINIMIZED AVERAGE STRUCTURE
8.0	8.0	8.0	72.0
0.0	0.0	96.0	0.0
8.0	8.0	72.0	8.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
0.0	96.0	0.0	0.0
8.0	0.0	8.0	80.0
72.0	8.0	8.0	8.0

#ID = F3D09726
#Short = 1h9t_B
#Long = FATTY ACID METABOLISM REGULATOR PROTEIN
#W = 6
#Organisms = Escherichia coli (strain K12)
#Description = FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATOR
0.0	24.0	24.0	48.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
12.0	24.0	24.0	36.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0

#ID = F3D09740
#Short = 1hlo_B
#Long = PROTEIN (TRANSCRIPTION FACTOR MAX)
#W = 5
#Organisms = Homo sapiens
#Description = THE CRYSTAL STRUCTURE OF AN INTACT HUMAN MAX-DNA COMPLEX: NEW INSIGHTS INTO MECHANISMS OF TRANSCRIPTIONAL CONTROL
16.0	48.0	16.0	16.0
0.0	0.0	96.0	0.0
16.0	0.0	16.0	64.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D09756
#Short = 1j1v_A
#Long = Chromosomal replication initiator protein dnaA
#W = 7
#Organisms = Escherichia coli (strain K12)
#Description = Crystal structure of DnaA domainIV complexed with DnaAbox DNA
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
12.0	0.0	84.0	0.0
12.0	12.0	60.0	12.0
96.0	0.0	0.0	0.0
12.0	12.0	12.0	60.0

#ID = F3D09770
#Short = 1jnm_B
#Long = PROTO-ONCOGENE C-JUN
#W = 5
#Organisms = Homo sapiens
#Description = Crystal Structure of the Jun/CRE Complex
16.0	48.0	16.0	16.0
0.0	0.0	80.0	16.0
0.0	0.0	0.0	96.0
0.0	80.0	16.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D09835
#Short = 1nk3_P
#Long = HOMEOBOX PROTEIN VND
#W = 8
#Organisms = Drosophila melanogaster
#Description = VND/NK-2 HOMEODOMAIN/DNA COMPLEX, NMR, MINIMIZED AVERAGE STRUCTURE
6.0	6.0	78.0	6.0
6.0	0.0	12.0	78.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0
78.0	6.0	6.0	6.0
24.0	24.0	24.0	24.0
6.0	6.0	6.0	78.0
6.0	6.0	78.0	6.0

#ID = F3D09841
#Short = 1nlw_D
#Long = MAD PROTEIN
#W = 5
#Organisms = Homo sapiens
#Description = Crystal structure of Mad-Max recognizing DNA
13.0	57.0	13.0	13.0
20.0	20.0	36.0	20.0
0.0	0.0	0.0	96.0
0.0	0.0	96.0	0.0
10.0	63.0	13.0	10.0

#ID = F3D09858
#Short = 1p7h_L
#Long = Nuclear factor of activated T-cells, cytoplasmic 2
#W = 4
#Organisms = Homo sapiens
#Description = Structure of NFAT1 bound as a dimer to the HIV-1 LTR kB element
17.0	16.0	16.0	47.0
0.0	1.0	0.0	95.0
0.0	96.0	0.0	0.0
0.0	95.0	1.0	0.0

#ID = F3D09886
#Short = 1qpz_A
#Long = PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR)
#W = 8
#Organisms = Escherichia coli (strain K12)
#Description = PURINE REPRESSOR-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0
12.0	60.0	12.0	12.0
38.0	19.0	19.0	20.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
0.0	96.0	0.0	0.0
14.0	14.0	54.0	14.0

#ID = F3D09902
#Short = 1rpe_R
#Long = PROTEIN (434 REPRESSOR)
#W = 6
#Organisms = Enterobacteria phage lambda,Phage 434
#Description = THE PHAGE 434 OR2/R1-69 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
38.0	19.0	20.0	19.0
9.0	9.0	11.0	67.0
0.0	0.0	0.0	96.0
13.0	13.0	56.0	14.0
0.0	0.0	0.0	96.0
67.0	9.0	9.0	11.0

#ID = F3D09921
#Short = 1tro_A
#Long = PROTEIN (TRP REPRESSOR)
#W = 5
#Organisms = Escherichia coli (strain K12)
#Description = CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTION
19.0	19.0	38.0	20.0
21.0	21.0	23.0	31.0
60.0	12.0	12.0	12.0
11.0	67.0	9.0	9.0
6.0	6.0	6.0	78.0

#ID = F3D09937
#Short = 1xsd_A
#Long = penicillinase repressor
#W = 6
#Organisms = Staphylococcus aureus
#Description = Crystal structure of the BlaI repressor in complex with DNA
4.0	4.0	4.0	84.0
0.0	0.0	96.0	0.0
0.0	0.0	0.0	96.0
96.0	0.0	0.0	0.0
12.0	12.0	60.0	12.0
16.0	16.0	19.0	45.0

#ID = F3D09942
#Short = 1yrn_B
#Long = PROTEIN (MAT ALPHA2 HOMEODOMAIN)
#W = 7
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = CRYSTAL STRUCTURE OF THE MATA1/MATALPHA2 HOMEODOMAIN HETERODIMER BOUND TO DNA
64.0	8.0	16.0	8.0
16.0	0.0	8.0	72.0
16.0	16.0	0.0	64.0
0.0	0.0	0.0	96.0
80.0	0.0	0.0	16.0
0.0	96.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D09945
#Short = 1ytb_A
#Long = PROTEIN (TATA BINDING PROTEIN (TBP))
#W = 12
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = CRYSTAL STRUCTURE OF A YEAST TBP/TATA-BOX COMPLEX
8.0	8.0	64.0	16.0
0.0	0.0	8.0	88.0
96.0	0.0	0.0	0.0
8.0	8.0	16.0	64.0
96.0	0.0	0.0	0.0
0.0	0.0	0.0	96.0
72.0	8.0	8.0	8.0
96.0	0.0	0.0	0.0
24.0	24.0	24.0	24.0
24.0	24.0	24.0	24.0
0.0	96.0	0.0	0.0
0.0	0.0	96.0	0.0

#ID = F3D09947
#Short = 1z9c_A
#Long = Organic hydroperoxide resistance transcriptional r
#W = 9
#Organisms = Bacillus subtilis,strain 168
#Description = Crystal structure of OhrR bound to the ohrA promoter: Structure of MarR family protein with operator DNA
66.0	12.0	6.0	12.0
6.0	78.0	6.0	6.0
24.0	24.0	24.0	24.0
78.0	6.0	6.0	6.0
6.0	6.0	6.0	78.0
6.0	6.0	6.0	78.0
24.0	24.0	24.0	24.0
96.0	0.0	0.0	0.0
96.0	0.0	0.0	0.0

#ID = F3D09976
#Short = 2bop_A
#Long = PROTEIN (E2)
#W = 4
#Organisms = Bovine papillomavirus type 1,Deltapapillomavirus 4
#Description = CRYSTAL STRUCTURE AT 1.7 ANGSTROMS OF THE BOVINE PAPILLOMAVIRUS-1 E2 DNA-BINDING DOMAIN BOUND TO ITS DNA TARGET
7.0	74.0	7.0	8.0
0.0	0.0	96.0	0.0
0.0	0.0	96.0	0.0
16.0	16.0	19.0	45.0

#ID = F3D09989
#Short = 2dgc_A
#Long = PROTEIN (GCN4)
#W = 5
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DNA
2.0	88.0	2.0	4.0
4.0	4.0	84.0	4.0
4.0	7.0	4.0	81.0
9.0	67.0	9.0	11.0
45.0	19.0	16.0	16.0

#ID = F3D09996
#Short = 2er8_C
#Long = Regulatory protein LEU3
#W = 4
#Organisms = Saccharomyces cerevisiae,Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
#Description = Crystal Structure of Leu3 DNA-binding domain complexed with a 12mer DNA duplex
15.0	49.0	17.0	15.0
10.0	63.0	13.0	10.0
3.0	3.0	87.0	3.0
1.0	1.0	92.0	2.0

