#MotifLabMotif   (inspired by INCLUSive Motif Model v1.0)

#Collection = JASPAR POLII
#Version = 2016

#Identifier[JASPAR] = [CN.+,http://jaspar.genereg.net/cgi-bin/jaspar_db.pl?&ID={ID}&rm=present&collection=CNE],[MF.+,http://jaspar.genereg.net/cgi-bin/jaspar_db.pl?&ID={ID}&rm=present&collection=FAM],[PB.+,http://jaspar.genereg.net/cgi-bin/jaspar_db.pl?&ID={ID}&rm=present&collection=PBM],[PL.+,http://jaspar.genereg.net/cgi-bin/jaspar_db.pl?&ID={ID}&rm=present&collection=PBM_HLH],[PH.+,http://jaspar.genereg.net/cgi-bin/jaspar_db.pl?&ID={ID}&rm=present&collection=PBM_HOMEO],[PF.+,http://jaspar.genereg.net/cgi-bin/jaspar_db.pl?&ID={ID}&rm=present&collection=PHYLOFACTS],[POL.+,http://jaspar.genereg.net/cgi-bin/jaspar_db.pl?&ID={ID}&rm=present&collection=POLII],[SA.+,http://jaspar.genereg.net/cgi-bin/jaspar_db.pl?&ID={ID}&rm=present&collection=SPLICE],[SD.+,http://jaspar.genereg.net/cgi-bin/jaspar_db.pl?&ID={ID}&rm=present&collection=SPLICE],http://jaspar.genereg.net/cgi-bin/jaspar_db.pl?&ID={ID}&rm=present&collection=CORE
#Identifier[TF encyclopedia] = http://cisreg.cmmt.ubc.ca/cgi-bin/tfe/articles.pl?tfid={ID}
#Identifier[PubMed] = http://www.ncbi.nlm.nih.gov/pubmed/{ID}
#Identifier[RefSeq] = [NP_.+,http://www.ncbi.nlm.nih.gov/protein/{ID}],http://www.ncbi.nlm.nih.gov/nuccore/{ID}
#Identifier[PAZAR] = http://www.pazar.info/cgi-bin/tf_search.cgi?geneID={ID}
#Identifier[UniProt] = http://www.uniprot.org/uniprot/{ID}
#Identifier[Ensembl] = [ENSG.+,http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g={ID}],[ENSMUSG.+,http://www.ensembl.org/Mus_musculus/Gene/Summary?db=core;g={ID}],http://www.ensembl.org/Multi/Search/Results?species=all;idx=;q={ID}
#Identifier[Entrez] = http://www.ncbi.nlm.nih.gov/gene/{ID}

#ID = POL001
#JASPAR = POL001.1
#Short name = MTE
#Organisms = Drosophila melanogaster
#TF class = Unknown
#Factors = MTE
#PubMed = 15231738
#W = 19
1	2	2	4
1	3	0	5
1	2	1	5
0	9	0	0
2	0	7	0
9	0	0	0
4	0	5	0
0	9	0	0
0	4	5	0
2	3	4	0
9	0	0	0
4	0	4	1
0	9	0	0
0	0	9	0
0	2	7	0
4	0	0	5
2	4	0	3
1	3	5	0
1	3	2	3

#ID = POL002
#JASPAR = POL002.1
#Short name = INR
#TF class = Unknown
#Factors = INR
#PubMed = 2329577
#W = 8
49	48	69	137
0	303	0	0
288	0	0	15
26	81	116	80
77	95	0	131
67	118	46	72
45	85	73	100
50	96	56	101

#ID = POL003
#JASPAR = POL003.1
#Short name = GC-box
#TF class = Unknown
#Factors = GC-box
#PubMed = 2329577
#W = 14
102	40	50	82
97	31	112	34
50	6	154	64
67	1	206	0
0	0	274	0
2	0	272	0
54	170	0	50
46	1	224	3
1	3	222	48
79	0	171	24
23	17	192	42
0	166	35	73
20	86	52	116
40	24	109	101

#ID = POL004
#JASPAR = POL004.1
#Short name = CCAAT-box
#TF class = Unknown
#Factors = CCAAT-box
#PubMed = 2329577
#W = 12
56	55	12	52
32	52	43	48
25	47	24	79
102	1	70	2
51	6	99	19
0	173	1	1
0	174	0	1
175	0	0	0
119	8	21	27
17	0	15	143
23	90	59	3
116	6	52	1

#ID = POL005
#JASPAR = POL005.1
#Short name = DPE
#Organisms = Drosophila melanogaster
#TF class = Unknown
#Factors = DPE
#PubMed = 10848601
#W = 9
24	18	30	10
36	21	6	19
41	3	28	10
2	30	47	3
43	2	1	36
7	30	4	41
16	31	35	0
15	21	11	35
19	22	17	24

#ID = POL006
#JASPAR = POL006.1
#Short name = BREu
#TF class = Unknown
#Factors = BREu
#PubMed = 9420329
#W = 8
12	7	2	1
3	8	11	0
1	14	7	0
6	4	12	0
4	15	2	1
0	0	22	0
0	20	1	1
1	18	1	2

#ID = POL007
#JASPAR = POL007.1
#Short name = BREd
#TF class = Unknown
#Factors = BREd
#PubMed = 16230532
#W = 7
10	4	19	8
5	8	8	20
10	6	11	14
3	6	15	17
4	8	15	14
2	6	13	20
6	9	10	16

#ID = POL008
#JASPAR = POL008.1
#Short name = DCE_S_I
#TF class = Unknown
#Factors = DCE_S_I
#PubMed = 16227614
#W = 6
18	19	46	25
4	93	6	5
3	12	8	85
4	12	20	72
2	93	7	6
22	34	27	25

#ID = POL009
#JASPAR = POL009.1
#Short name = DCE_S_II
#TF class = Unknown
#Factors = DCE_S_II
#PubMed = 16227614
#W = 6
16	34	43	15
3	100	3	2
6	5	13	84
2	11	90	5
14	21	13	60
16	28	45	19

#ID = POL010
#JASPAR = POL010.1
#Short name = DCE_S_III
#TF class = Unknown
#Factors = DCE_S_III
#PubMed = 16227614
#W = 5
17	43	35	13
108	0	0	0
0	0	108	0
0	108	0	0
20	36	29	23

#ID = POL011
#JASPAR = POL011.1
#Short name = XCPE1
#TF class = Unknown
#Factors = XCPE1
#PubMed = 17210644
#W = 10
0	0	21	0
0	6	15	0
0	0	21	0
0	19	0	2
0	0	21	0
0	0	21	0
3	0	18	0
21	0	0	0
0	14	7	0
2	19	0	0

#ID = POL012
#JASPAR = POL012.1
#Short name = TATA-Box
#TF class = Unknown
#Factors = TATA-Box
#PubMed = 2329577
#W = 15
61	145	152	31
16	46	18	309
352	0	2	35
3	10	2	374
354	0	5	30
268	0	0	121
360	3	10	6
222	2	44	121
155	44	157	33
56	135	150	48
83	147	128	31
82	127	128	52
82	118	128	61
68	107	139	75
77	101	140	71

#ID = POL013
#JASPAR = POL013.1
#Short name = MED-1
#TF class = Unknown
#Factors = MED-1
#PubMed = 8530439
#W = 6
0	0	14	0
0	14	0	0
0	0	0	14
0	14	0	0
0	14	0	0
0	5	9	0

